RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 DNAJB8Q8NHS0 232 aa17.54■□□□□ 0.4
USP39-201ENST00000323701 LMX1AQ8TE12 382 aa17.54■□□□□ 0.4
USP39-201ENST00000323701 NECAB3Q96P71 396 aaPredicted RBP17.54■□□□□ 0.4
USP39-201ENST00000323701 TMEM121BQ9BXQ6 578 aaPredicted RBP17.54■□□□□ 0.4
USP39-201ENST00000323701 BHLHE41Q9C0J9 482 aaPredicted RBP17.54■□□□□ 0.4
USP39-201ENST00000323701 DDX31Q9H8H2 851 aaKnown RBP17.54■□□□□ 0.4
USP39-201ENST00000323701 SLAMF7Q9NQ25 335 aa17.54■□□□□ 0.4
USP39-201ENST00000323701 CCM2LQ9NUG4 571 aaPredicted RBP17.54■□□□□ 0.4
USP39-201ENST00000323701 HRASLS2Q9NWW9 162 aa17.54■□□□□ 0.4
USP39-201ENST00000323701 SCN3AQ9NY46 2000 aa17.54■□□□□ 0.4
USP39-201ENST00000323701 C6orf203Q9P0P8 240 aaPredicted RBP17.54■□□□□ 0.4
USP39-201ENST00000323701 BTNL2Q9UIR0 455 aa17.54■□□□□ 0.4
USP39-201ENST00000323701 A0A0A6YYD5 115 aa17.53■□□□□ 0.4
USP39-201ENST00000323701 OR2A25A4D2G3 310 aa17.53■□□□□ 0.4
USP39-201ENST00000323701 CCNDBP1O95273 360 aa17.53■□□□□ 0.4
USP39-201ENST00000323701 MT-ND1P03886 318 aa17.53■□□□□ 0.4
USP39-201ENST00000323701 AHRP35869 848 aa17.53■□□□□ 0.4
USP39-201ENST00000323701 CASP9P55211 416 aa17.53■□□□□ 0.4
USP39-201ENST00000323701 TJAP1Q5JTD0 557 aa17.53■□□□□ 0.4
USP39-201ENST00000323701 AMIGO2Q86SJ2 522 aa17.53■□□□□ 0.4
USP39-201ENST00000323701 NUDT13Q86X67 352 aa17.53■□□□□ 0.4
USP39-201ENST00000323701 OR8K5Q8NH50 307 aa17.53■□□□□ 0.4
USP39-201ENST00000323701 DNAJC9Q8WXX5 260 aa17.53■□□□□ 0.4
USP39-201ENST00000323701 STARD8Q92502 1023 aa17.53■□□□□ 0.4
USP39-201ENST00000323701 FIG4Q92562 907 aa17.53■□□□□ 0.4
USP39-201ENST00000323701 PRPF18Q99633 342 aaKnown RBP17.53■□□□□ 0.4
USP39-201ENST00000323701 DPH2Q9BQC3 489 aaPredicted RBP17.53■□□□□ 0.4
USP39-201ENST00000323701 PCED1AQ9H1Q7 454 aa17.53■□□□□ 0.4
USP39-201ENST00000323701 PRDM7Q9NQW5 492 aa17.53■□□□□ 0.4
USP39-201ENST00000323701 CABIN1Q9Y6J0 2220 aa17.53■□□□□ 0.4
USP39-201ENST00000323701 RNASET2O00584 256 aaKnown RBP17.53■□□□□ 0.4
USP39-201ENST00000323701 ZW10O43264 779 aa17.53■□□□□ 0.4
USP39-201ENST00000323701 TPST1O60507 370 aa17.53■□□□□ 0.4
USP39-201ENST00000323701 RAB8AP61006 207 aa17.53■□□□□ 0.4
USP39-201ENST00000323701 KLC1Q07866 573 aa17.53■□□□□ 0.4
USP39-201ENST00000323701 TOR1AIP1Q5JTV8 583 aa17.53■□□□□ 0.4
USP39-201ENST00000323701 OGFRL1Q5TC84 451 aaPredicted RBP17.53■□□□□ 0.4
USP39-201ENST00000323701 TMEM26Q6ZUK4 368 aa17.53■□□□□ 0.4
USP39-201ENST00000323701 DCP2Q8IU60 420 aaKnown RBP17.53■□□□□ 0.4
USP39-201ENST00000323701 SHISA5Q8N114 240 aa17.53■□□□□ 0.4
USP39-201ENST00000323701 TTLQ8NG68 377 aa17.53■□□□□ 0.4
USP39-201ENST00000323701 OR4A15Q8NGL6 344 aa17.53■□□□□ 0.4
USP39-201ENST00000323701 FAM174AQ8TBP5 190 aa17.53■□□□□ 0.4
USP39-201ENST00000323701 GPATCH2Q9NW75 528 aa17.53■□□□□ 0.4
USP39-201ENST00000323701 UCKL1Q9NWZ5 548 aa17.53■□□□□ 0.4
USP39-201ENST00000323701 NCOR1O75376 2440 aa17.52■□□□□ 0.4
USP39-201ENST00000323701 LOC105369274A0A096LPK9 316 aa17.52■□□□□ 0.4
USP39-201ENST00000323701 LOC102723532A0A0G2JNH3 316 aa17.52■□□□□ 0.4
USP39-201ENST00000323701 ELOVL7A1L3X0 281 aa17.52■□□□□ 0.4
USP39-201ENST00000323701 P2RX6O15547 441 aa17.52■□□□□ 0.4
USP39-201ENST00000323701 TNFSF14O43557 240 aa17.52■□□□□ 0.4
USP39-201ENST00000323701 HCRTR1O43613 425 aa17.52■□□□□ 0.4
USP39-201ENST00000323701 STAMBPO95630 424 aa17.52■□□□□ 0.4
USP39-201ENST00000323701 NUDT7P0C024 238 aa17.52■□□□□ 0.4
USP39-201ENST00000323701 ATP6V1C1P21283 382 aa17.52■□□□□ 0.4
USP39-201ENST00000323701 SSR2P43308 183 aa17.52■□□□□ 0.4
USP39-201ENST00000323701 ALDH9A1P49189 494 aa17.52■□□□□ 0.4
USP39-201ENST00000323701 HNRNPFP52597 415 aaKnown RBP17.52■□□□□ 0.4
USP39-201ENST00000323701 NXPH1P58417 271 aa17.52■□□□□ 0.4
USP39-201ENST00000323701 ABHD17CQ6PCB6 329 aa17.52■□□□□ 0.4
USP39-201ENST00000323701 FIGLAQ6QHK4 219 aa17.52■□□□□ 0.4
USP39-201ENST00000323701 SPESP1Q6UW49 350 aa17.52■□□□□ 0.4
USP39-201ENST00000323701 IQCHQ86VS3 1027 aa17.52■□□□□ 0.4
USP39-201ENST00000323701 OR4N4Q8N0Y3 316 aa17.52■□□□□ 0.4
USP39-201ENST00000323701 ZFPM2Q8WW38 1151 aa17.52■□□□□ 0.4
USP39-201ENST00000323701 SLC22A18Q96BI1 424 aa17.52■□□□□ 0.4
USP39-201ENST00000323701 FAM120BQ96EK7 910 aaKnown RBP17.52■□□□□ 0.4
USP39-201ENST00000323701 SPACA7Q96KW9 195 aa17.52■□□□□ 0.4
USP39-201ENST00000323701 PHF12Q96QT6 1004 aa17.52■□□□□ 0.4
USP39-201ENST00000323701 OR2A5Q96R48 311 aa17.52■□□□□ 0.4
USP39-201ENST00000323701 SH3GL1Q99961 368 aa17.52■□□□□ 0.4
USP39-201ENST00000323701 MUC13Q9H3R2 512 aa17.52■□□□□ 0.4
USP39-201ENST00000323701 TPT1P8Q9HAU6 139 aa17.52■□□□□ 0.4
USP39-201ENST00000323701 A0A0J9YVX5 310 aa17.52■□□□□ 0.39
USP39-201ENST00000323701 FAM149AA5PLN7 773 aa17.52■□□□□ 0.39
USP39-201ENST00000323701 OR5K4A6NMS3 321 aa17.52■□□□□ 0.39
USP39-201ENST00000323701 NTRK1P04629 796 aa17.52■□□□□ 0.39
USP39-201ENST00000323701 DDCP20711 480 aa17.52■□□□□ 0.39
USP39-201ENST00000323701 SRSF5Q13243 272 aaKnown RBP17.52■□□□□ 0.39
USP39-201ENST00000323701 ADRM1Q16186 407 aa17.52■□□□□ 0.39
USP39-201ENST00000323701 ANXA8L1Q5VT79 327 aa17.52■□□□□ 0.39
USP39-201ENST00000323701 FRMPD2BQ6IN97 320 aa17.52■□□□□ 0.39
USP39-201ENST00000323701 IKBIPQ70UQ0 350 aa17.52■□□□□ 0.39
USP39-201ENST00000323701 PAGE2Q7Z2X7 111 aa17.52■□□□□ 0.39
USP39-201ENST00000323701 MICU2Q8IYU8 434 aa17.52■□□□□ 0.39
USP39-201ENST00000323701 SEPHS2Q99611 448 aa17.52■□□□□ 0.39
USP39-201ENST00000323701 CENPKQ9BS16 269 aa17.52■□□□□ 0.39
USP39-201ENST00000323701 MIEF1Q9NQG6 463 aa17.52■□□□□ 0.39
USP39-201ENST00000323701 BATF3Q9NR55 127 aa17.52■□□□□ 0.39
USP39-201ENST00000323701 ARMC1Q9NVT9 282 aa17.52■□□□□ 0.39
USP39-201ENST00000323701 MAGEL2Q9UJ55 1249 aa17.52■□□□□ 0.39
USP39-201ENST00000323701 PILRAQ9UKJ1 303 aa17.52■□□□□ 0.39
USP39-201ENST00000323701 ACSL6Q9UKU0 697 aa17.52■□□□□ 0.39
USP39-201ENST00000323701 TECTAO75443 2155 aa17.52■□□□□ 0.39
USP39-201ENST00000323701 THADAQ6YHU6 1953 aa17.51■□□□□ 0.39
USP39-201ENST00000323701 GPR37L1O60883 481 aa17.51■□□□□ 0.39
USP39-201ENST00000323701 GPX2P18283 190 aa17.51■□□□□ 0.39
USP39-201ENST00000323701 AQP4P55087 323 aa17.51■□□□□ 0.39
USP39-201ENST00000323701 BLMHQ13867 455 aa17.51■□□□□ 0.39
USP39-201ENST00000323701 NKG7Q16617 165 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms