RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 KDM4DQ6B0I6 523 aa12.27□□□□□ -0.45
DNMT3A-202ENST00000321117 REEP3Q6NUK4 255 aa12.27□□□□□ -0.45
DNMT3A-202ENST00000321117 AIF1LQ9BQI0 150 aa12.27□□□□□ -0.45
DNMT3A-202ENST00000321117 YIPF2Q9BWQ6 316 aa12.27□□□□□ -0.45
DNMT3A-202ENST00000321117 KATNBL1Q9H079 304 aa12.27□□□□□ -0.45
DNMT3A-202ENST00000321117 TAS2R7Q9NYW3 318 aa12.27□□□□□ -0.45
DNMT3A-202ENST00000321117 CCDC59Q9P031 241 aaKnown RBP12.27□□□□□ -0.45
DNMT3A-202ENST00000321117 ZNF225Q9UK10 706 aa12.27□□□□□ -0.45
DNMT3A-202ENST00000321117 ACSL6Q9UKU0 697 aa12.27□□□□□ -0.45
DNMT3A-202ENST00000321117 COL11A1P12107 1806 aaPredicted RBP12.26□□□□□ -0.45
DNMT3A-202ENST00000321117 SH3D21A4FU49 640 aa12.26□□□□□ -0.45
DNMT3A-202ENST00000321117 GLTPD2A6NH11 291 aa12.26□□□□□ -0.45
DNMT3A-202ENST00000321117 PDPK1O15530 556 aa12.26□□□□□ -0.45
DNMT3A-202ENST00000321117 HSD3B1P14060 373 aa12.26□□□□□ -0.45
DNMT3A-202ENST00000321117 HSD3B2P26439 372 aa12.26□□□□□ -0.45
DNMT3A-202ENST00000321117 PRKCDQ05655 676 aa12.26□□□□□ -0.45
DNMT3A-202ENST00000321117 NKG7Q16617 165 aa12.26□□□□□ -0.45
DNMT3A-202ENST00000321117 C16orf62Q7Z3J2 963 aa12.26□□□□□ -0.45
DNMT3A-202ENST00000321117 DNAJC22Q8N4W6 341 aa12.26□□□□□ -0.45
DNMT3A-202ENST00000321117 Q8N9G6 341 aaPredicted RBP12.26□□□□□ -0.45
DNMT3A-202ENST00000321117 B3GNT7Q8NFL0 401 aa12.26□□□□□ -0.45
DNMT3A-202ENST00000321117 ZNF671Q8TAW3 534 aa12.26□□□□□ -0.45
DNMT3A-202ENST00000321117 TSSK6Q9BXA6 273 aa12.26□□□□□ -0.45
DNMT3A-202ENST00000321117 SIAEQ9HAT2 523 aa12.26□□□□□ -0.45
DNMT3A-202ENST00000321117 ELOVL2Q9NXB9 296 aa12.26□□□□□ -0.45
DNMT3A-202ENST00000321117 OR2A25A4D2G3 310 aa12.26□□□□□ -0.45
DNMT3A-202ENST00000321117 METTL15A6NJ78 407 aa12.26□□□□□ -0.45
DNMT3A-202ENST00000321117 NDUFB5O43674 189 aa12.26□□□□□ -0.45
DNMT3A-202ENST00000321117 GUCY1B2O75343 617 aa12.26□□□□□ -0.45
DNMT3A-202ENST00000321117 MPC1LP0DKB6 136 aa12.26□□□□□ -0.45
DNMT3A-202ENST00000321117 PREPP48147 710 aa12.26□□□□□ -0.45
DNMT3A-202ENST00000321117 CDKL4Q5MAI5 379 aa12.26□□□□□ -0.45
DNMT3A-202ENST00000321117 TRPV1Q8NER1 839 aa12.26□□□□□ -0.45
DNMT3A-202ENST00000321117 OR52L1Q8NGH7 329 aa12.26□□□□□ -0.45
DNMT3A-202ENST00000321117 ZNF300Q96RE9 604 aaPredicted RBP12.26□□□□□ -0.45
DNMT3A-202ENST00000321117 RIOK2Q9BVS4 552 aaKnown RBP12.26□□□□□ -0.45
DNMT3A-202ENST00000321117 PRDM8Q9NQV8 689 aa12.26□□□□□ -0.45
DNMT3A-202ENST00000321117 MGAT4BQ9UQ53 548 aa12.26□□□□□ -0.45
DNMT3A-202ENST00000321117 CENPBD1B2RD01 187 aa12.26□□□□□ -0.45
DNMT3A-202ENST00000321117 SSNA1O43805 119 aa12.26□□□□□ -0.45
DNMT3A-202ENST00000321117 PCDHGA12O60330 932 aa12.26□□□□□ -0.45
DNMT3A-202ENST00000321117 KCNC3Q14003 757 aa12.26□□□□□ -0.45
DNMT3A-202ENST00000321117 MICAQ29983 383 aa12.26□□□□□ -0.45
DNMT3A-202ENST00000321117 CXorf57Q6NSI4 855 aaKnown RBP12.26□□□□□ -0.45
DNMT3A-202ENST00000321117 MTSS1LQ765P7 747 aa12.26□□□□□ -0.45
DNMT3A-202ENST00000321117 LKAAEAR1Q8TD35 194 aa12.26□□□□□ -0.45
DNMT3A-202ENST00000321117 C11orf24Q96F05 449 aaPredicted RBP12.26□□□□□ -0.45
DNMT3A-202ENST00000321117 TXNDC15Q96J42 360 aa12.26□□□□□ -0.45
DNMT3A-202ENST00000321117 SESN1Q9Y6P5 492 aa12.26□□□□□ -0.45
DNMT3A-202ENST00000321117 LTBP4Q8N2S1 1624 aa12.26□□□□□ -0.45
DNMT3A-202ENST00000321117 UNCXA6NJT0 531 aa12.25□□□□□ -0.45
DNMT3A-202ENST00000321117 SLC16A5O15375 505 aa12.25□□□□□ -0.45
DNMT3A-202ENST00000321117 TAPBPO15533 448 aa12.25□□□□□ -0.45
DNMT3A-202ENST00000321117 CD9P21926 228 aa12.25□□□□□ -0.45
DNMT3A-202ENST00000321117 DGKGP49619 791 aa12.25□□□□□ -0.45
DNMT3A-202ENST00000321117 SF3B4Q15427 424 aaKnown RBP eCLIP12.25□□□□□ -0.459e-8■■■■■ 56.7
DNMT3A-202ENST00000321117 RTP2Q5QGT7 225 aa12.25□□□□□ -0.45
DNMT3A-202ENST00000321117 SPATC1Q76KD6 591 aa12.25□□□□□ -0.45
DNMT3A-202ENST00000321117 ENTHD1Q8IYW4 607 aa12.25□□□□□ -0.45
DNMT3A-202ENST00000321117 SCAMP4Q969E2 229 aa12.25□□□□□ -0.45
DNMT3A-202ENST00000321117 RFKQ969G6 155 aa12.25□□□□□ -0.45
DNMT3A-202ENST00000321117 HRASLS5Q96KN8 279 aa12.25□□□□□ -0.45
DNMT3A-202ENST00000321117 CAPN10Q9HC96 672 aa12.25□□□□□ -0.45
DNMT3A-202ENST00000321117 PSORS1C1Q9UIG5 152 aa12.25□□□□□ -0.45
DNMT3A-202ENST00000321117 COL4A5P29400 1685 aa12.25□□□□□ -0.45
DNMT3A-202ENST00000321117 ANKRD28O15084 1053 aa12.25□□□□□ -0.45
DNMT3A-202ENST00000321117 PCGF2P35227 344 aa12.25□□□□□ -0.45
DNMT3A-202ENST00000321117 GATMP50440 423 aa12.25□□□□□ -0.45
DNMT3A-202ENST00000321117 CCL23P55773 120 aa12.25□□□□□ -0.45
DNMT3A-202ENST00000321117 SF1Q15637 639 aaKnown RBP12.25□□□□□ -0.45
DNMT3A-202ENST00000321117 BCL7AQ4VC05 210 aa12.25□□□□□ -0.45
DNMT3A-202ENST00000321117 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.25□□□□□ -0.45
DNMT3A-202ENST00000321117 RGMBQ6NW40 437 aa12.25□□□□□ -0.45
DNMT3A-202ENST00000321117 SLC46A3Q7Z3Q1 461 aa12.25□□□□□ -0.45
DNMT3A-202ENST00000321117 FAM217AQ8IXS0 508 aa12.25□□□□□ -0.45
DNMT3A-202ENST00000321117 SLC43A3Q8NBI5 491 aa12.25□□□□□ -0.45
DNMT3A-202ENST00000321117 ZNF566Q969W8 418 aa12.25□□□□□ -0.45
DNMT3A-202ENST00000321117 DIABLOQ9NR28 239 aa12.25□□□□□ -0.45
DNMT3A-202ENST00000321117 HSPB11Q9Y547 144 aa12.25□□□□□ -0.45
DNMT3A-202ENST00000321117 PGRMC2O15173 223 aa12.25□□□□□ -0.45
DNMT3A-202ENST00000321117 PI15O43692 258 aa12.25□□□□□ -0.45
DNMT3A-202ENST00000321117 IL7P13232 177 aa12.25□□□□□ -0.45
DNMT3A-202ENST00000321117 IFI30P13284 250 aa12.25□□□□□ -0.45
DNMT3A-202ENST00000321117 JUNDP17535 347 aa12.25□□□□□ -0.45
DNMT3A-202ENST00000321117 BMP7P18075 431 aa12.25□□□□□ -0.45
DNMT3A-202ENST00000321117 RHCEP18577 417 aa12.25□□□□□ -0.45
DNMT3A-202ENST00000321117 UGT2B10P36537 528 aa12.25□□□□□ -0.45
DNMT3A-202ENST00000321117 E2F2Q14209 437 aa12.25□□□□□ -0.45
DNMT3A-202ENST00000321117 RNF175Q8N4F7 328 aa12.25□□□□□ -0.45
DNMT3A-202ENST00000321117 OR8J1Q8NGP2 316 aa12.25□□□□□ -0.45
DNMT3A-202ENST00000321117 USP7Q93009 1102 aa12.25□□□□□ -0.45
DNMT3A-202ENST00000321117 ZBED6CLQ96FA7 236 aaPredicted RBP12.25□□□□□ -0.45
DNMT3A-202ENST00000321117 ENPP4Q9Y6X5 453 aa12.25□□□□□ -0.45
DNMT3A-202ENST00000321117 RBBP6Q7Z6E9 1792 aaKnown RBP12.25□□□□□ -0.45
DNMT3A-202ENST00000321117 H7C0S8 307 aa12.25□□□□□ -0.45
DNMT3A-202ENST00000321117 EIF3FO00303 357 aaPredicted RBP12.25□□□□□ -0.45
DNMT3A-202ENST00000321117 NUDT7P0C024 238 aa12.25□□□□□ -0.45
DNMT3A-202ENST00000321117 ADORA3P0DMS8 318 aa12.25□□□□□ -0.45
DNMT3A-202ENST00000321117 ARF5P84085 180 aa12.25□□□□□ -0.45
DNMT3A-202ENST00000321117 CD300CQ08708 224 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms