RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 CAMK1GQ96NX5 476 aa7.24□□□□□ -1.25
IFT88-201ENST00000319980 BARD1Q99728 777 aaKnown RBP7.24□□□□□ -1.25
IFT88-201ENST00000319980 GABRG3Q99928 467 aa7.24□□□□□ -1.25
IFT88-201ENST00000319980 SPOCK3Q9BQ16 436 aa7.24□□□□□ -1.25
IFT88-201ENST00000319980 APOOQ9BUR5 198 aa7.24□□□□□ -1.25
IFT88-201ENST00000319980 ASPSCR1Q9BZE9 553 aa7.24□□□□□ -1.25
IFT88-201ENST00000319980 TRIM4Q9C037 500 aa7.24□□□□□ -1.25
IFT88-201ENST00000319980 ABCG4Q9H172 646 aa7.24□□□□□ -1.25
IFT88-201ENST00000319980 CHST8Q9H2A9 424 aa7.24□□□□□ -1.25
IFT88-201ENST00000319980 RHBGQ9H310 441 aa7.24□□□□□ -1.25
IFT88-201ENST00000319980 WASH6PQ9NQA3 447 aa7.24□□□□□ -1.25
IFT88-201ENST00000319980 TAS2R9Q9NYW1 312 aa7.24□□□□□ -1.25
IFT88-201ENST00000319980 C3orf18Q9UK00 162 aa7.24□□□□□ -1.25
IFT88-201ENST00000319980 DMTF1Q9Y222 760 aa7.24□□□□□ -1.25
IFT88-201ENST00000319980 SLC17A4Q9Y2C5 497 aa7.24□□□□□ -1.25
IFT88-201ENST00000319980 TSC22D4Q9Y3Q8 395 aa7.24□□□□□ -1.25
IFT88-201ENST00000319980 SNX8Q9Y5X2 465 aa7.24□□□□□ -1.25
IFT88-201ENST00000319980 COMMD3-BMI1R4GMX3 469 aa7.24□□□□□ -1.25
IFT88-201ENST00000319980 PCM1Q15154 2024 aa7.23□□□□□ -1.25
IFT88-201ENST00000319980 DOCK9Q9BZ29 2069 aa7.23□□□□□ -1.25
IFT88-201ENST00000319980 GOLGA4Q13439 2230 aaKnown RBP7.23□□□□□ -1.25
IFT88-201ENST00000319980 A0A0G2JN53 185 aa7.23□□□□□ -1.25
IFT88-201ENST00000319980 POM121BA6NF01 834 aa7.23□□□□□ -1.25
IFT88-201ENST00000319980 CACNB4O00305 520 aaPredicted RBP7.23□□□□□ -1.25
IFT88-201ENST00000319980 SUV39H1O43463 412 aa7.23□□□□□ -1.25
IFT88-201ENST00000319980 LCMT2O60294 686 aaKnown RBP7.23□□□□□ -1.25
IFT88-201ENST00000319980 OPN1SWP03999 348 aa7.23□□□□□ -1.25
IFT88-201ENST00000319980 CDH2P19022 906 aaPredicted RBP7.23□□□□□ -1.25
IFT88-201ENST00000319980 TEAD1P28347 426 aa7.23□□□□□ -1.25
IFT88-201ENST00000319980 SHMT2P34897 504 aa7.23□□□□□ -1.25
IFT88-201ENST00000319980 CHI3L1P36222 383 aaPredicted RBP7.23□□□□□ -1.25
IFT88-201ENST00000319980 PRIM2P49643 509 aa7.23□□□□□ -1.25
IFT88-201ENST00000319980 RAB28P51157 221 aa7.23□□□□□ -1.25
IFT88-201ENST00000319980 CRYBA2P53672 197 aa7.23□□□□□ -1.25
IFT88-201ENST00000319980 TPD52P55327 224 aaPredicted RBP7.23□□□□□ -1.25
IFT88-201ENST00000319980 CLDN2P57739 230 aa7.23□□□□□ -1.25
IFT88-201ENST00000319980 PPP2CBP62714 309 aa7.23□□□□□ -1.25
IFT88-201ENST00000319980 PPP2CAP67775 309 aa7.23□□□□□ -1.25
IFT88-201ENST00000319980 PRDX1Q06830 199 aaKnown RBP7.23□□□□□ -1.25
IFT88-201ENST00000319980 TTC23Q5W5X9 447 aa7.23□□□□□ -1.25
IFT88-201ENST00000319980 MTSS1LQ765P7 747 aa7.23□□□□□ -1.25
IFT88-201ENST00000319980 CEP68Q76N32 757 aa7.23□□□□□ -1.25
IFT88-201ENST00000319980 GALNT5Q7Z7M9 940 aa7.23□□□□□ -1.25
IFT88-201ENST00000319980 RNF130Q86XS8 419 aa7.23□□□□□ -1.25
IFT88-201ENST00000319980 C8orf59Q8N0T1 100 aaPredicted RBP7.23□□□□□ -1.25
IFT88-201ENST00000319980 ZNF555Q8NEP9 628 aa7.23□□□□□ -1.25
IFT88-201ENST00000319980 OR2A1Q8NGT9 310 aa7.23□□□□□ -1.25
IFT88-201ENST00000319980 GOT1L1Q8NHS2 421 aaPredicted RBP7.23□□□□□ -1.25
IFT88-201ENST00000319980 MBOAT4Q96T53 435 aa7.23□□□□□ -1.25
IFT88-201ENST00000319980 TIMM29Q9BSF4 260 aa7.23□□□□□ -1.25
IFT88-201ENST00000319980 C1QTNF7Q9BXJ2 289 aa7.23□□□□□ -1.25
IFT88-201ENST00000319980 MS4A8Q9BY19 250 aa7.23□□□□□ -1.25
IFT88-201ENST00000319980 ZNF717Q9BY31 904 aaPredicted RBP7.23□□□□□ -1.25
IFT88-201ENST00000319980 ADNPQ9H2P0 1102 aa7.23□□□□□ -1.25
IFT88-201ENST00000319980 PELI2Q9HAT8 420 aa7.23□□□□□ -1.25
IFT88-201ENST00000319980 CD93Q9NPY3 652 aa7.23□□□□□ -1.25
IFT88-201ENST00000319980 USE1Q9NZ43 259 aa7.23□□□□□ -1.25
IFT88-201ENST00000319980 SPATA7Q9P0W8 599 aa7.23□□□□□ -1.25
IFT88-201ENST00000319980 TAAR2Q9P1P5 351 aa7.23□□□□□ -1.25
IFT88-201ENST00000319980 C5AR2Q9P296 337 aa7.23□□□□□ -1.25
IFT88-201ENST00000319980 PCDHGA8Q9Y5G5 932 aa7.23□□□□□ -1.25
IFT88-201ENST00000319980 H0Y8X5 98 aa7.23□□□□□ -1.25
IFT88-201ENST00000319980 PPM1DO15297 605 aa7.23□□□□□ -1.25
IFT88-201ENST00000319980 BMP10O95393 424 aa7.23□□□□□ -1.25
IFT88-201ENST00000319980 STATHP02808 62 aa7.23□□□□□ -1.25
IFT88-201ENST00000319980 ALDH3B2P48448 385 aa7.23□□□□□ -1.25
IFT88-201ENST00000319980 PLA2G16P53816 162 aa7.23□□□□□ -1.25
IFT88-201ENST00000319980 CSNK1G2P78368 415 aa7.23□□□□□ -1.25
IFT88-201ENST00000319980 TMEM26Q6ZUK4 368 aa7.23□□□□□ -1.25
IFT88-201ENST00000319980 RD3Q7Z3Z2 195 aa7.23□□□□□ -1.25
IFT88-201ENST00000319980 THAP5Q7Z6K1 395 aa7.23□□□□□ -1.25
IFT88-201ENST00000319980 DCP2Q8IU60 420 aaKnown RBP7.23□□□□□ -1.25
IFT88-201ENST00000319980 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.23□□□□□ -1.25
IFT88-201ENST00000319980 ADGRF3Q8IZF5 1079 aa7.23□□□□□ -1.25
IFT88-201ENST00000319980 PJA1Q8NG27 643 aa7.23□□□□□ -1.25
IFT88-201ENST00000319980 OR52E1Q8NGJ3 308 aa7.23□□□□□ -1.25
IFT88-201ENST00000319980 NCSTNQ92542 709 aa7.23□□□□□ -1.25
IFT88-201ENST00000319980 MTERF3Q96E29 417 aa7.23□□□□□ -1.25
IFT88-201ENST00000319980 RDH12Q96NR8 316 aa7.23□□□□□ -1.25
IFT88-201ENST00000319980 FGF22Q9HCT0 170 aa7.23□□□□□ -1.25
IFT88-201ENST00000319980 ADPRHL2Q9NX46 363 aa7.23□□□□□ -1.25
IFT88-201ENST00000319980 CA5BQ9Y2D0 317 aa7.23□□□□□ -1.25
IFT88-201ENST00000319980 SAMHD1Q9Y3Z3 626 aaKnown RBP7.23□□□□□ -1.25
IFT88-201ENST00000319980 ORC6Q9Y5N6 252 aa7.23□□□□□ -1.25
IFT88-201ENST00000319980 CEPT1Q9Y6K0 416 aa7.23□□□□□ -1.25
IFT88-201ENST00000319980 IGKV1-8A0A0C4DH67 115 aa7.22□□□□□ -1.25
IFT88-201ENST00000319980 LOC100130705A0A1B0GUX0 176 aa7.22□□□□□ -1.25
IFT88-201ENST00000319980 TRIM64A6NGJ6 449 aa7.22□□□□□ -1.25
IFT88-201ENST00000319980 CAPN5O15484 640 aaPredicted RBP7.22□□□□□ -1.25
IFT88-201ENST00000319980 MITFO75030 526 aaPredicted RBP7.22□□□□□ -1.25
IFT88-201ENST00000319980 GCM2O75603 506 aaPredicted RBP7.22□□□□□ -1.25
IFT88-201ENST00000319980 DDCP20711 480 aa7.22□□□□□ -1.25
IFT88-201ENST00000319980 BSGP35613 385 aa7.22□□□□□ -1.25
IFT88-201ENST00000319980 ESRRGP62508 458 aa7.22□□□□□ -1.25
IFT88-201ENST00000319980 EPS8Q12929 822 aa7.22□□□□□ -1.25
IFT88-201ENST00000319980 HTR4Q13639 388 aa7.22□□□□□ -1.25
IFT88-201ENST00000319980 HEPACAMQ14CZ8 416 aa7.22□□□□□ -1.25
IFT88-201ENST00000319980 TEAD4Q15561 434 aa7.22□□□□□ -1.25
IFT88-201ENST00000319980 UAP1L1Q3KQV9 507 aa7.22□□□□□ -1.25
IFT88-201ENST00000319980 TMEM31Q5JXX7 168 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms