RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 B3GALT4O96024 378 aa13.3□□□□□ -0.28
RPP40-201ENST00000319533 AHSGP02765 367 aa13.3□□□□□ -0.28
RPP40-201ENST00000319533 ELK3P41970 407 aa13.3□□□□□ -0.28
RPP40-201ENST00000319533 RPL21P46778 160 aaKnown RBP13.3□□□□□ -0.28
RPP40-201ENST00000319533 OLR1P78380 273 aa13.3□□□□□ -0.28
RPP40-201ENST00000319533 BTG2P78543 158 aa13.3□□□□□ -0.28
RPP40-201ENST00000319533 CKAP4Q07065 602 aaKnown RBP13.3□□□□□ -0.28
RPP40-201ENST00000319533 RGS1Q08116 209 aa13.3□□□□□ -0.28
RPP40-201ENST00000319533 C2orf54Q08AI8 447 aa13.3□□□□□ -0.28
RPP40-201ENST00000319533 HYAL2Q12891 473 aa13.3□□□□□ -0.28
RPP40-201ENST00000319533 HP1BP3Q5SSJ5 553 aaPredicted RBP13.3□□□□□ -0.28
RPP40-201ENST00000319533 CATSPEREQ5SY80 951 aa13.3□□□□□ -0.28
RPP40-201ENST00000319533 RBM20Q5T481 1227 aaKnown RBP13.3□□□□□ -0.28
RPP40-201ENST00000319533 ABHD13Q7L211 337 aa13.3□□□□□ -0.28
RPP40-201ENST00000319533 GALNT7Q86SF2 657 aa13.3□□□□□ -0.28
RPP40-201ENST00000319533 IGDCC3Q8IVU1 814 aa13.3□□□□□ -0.28
RPP40-201ENST00000319533 CEP97Q8IW35 865 aa13.3□□□□□ -0.28
RPP40-201ENST00000319533 TBC1D19Q8N5T2 526 aa13.3□□□□□ -0.28
RPP40-201ENST00000319533 ALKBH8Q96BT7 664 aaKnown RBP13.3□□□□□ -0.28
RPP40-201ENST00000319533 PYCR2Q96C36 320 aa13.3□□□□□ -0.28
RPP40-201ENST00000319533 PWWP2AQ96N64 755 aa13.3□□□□□ -0.28
RPP40-201ENST00000319533 PTCHD1Q96NR3 888 aa13.3□□□□□ -0.28
RPP40-201ENST00000319533 ERP44Q9BS26 406 aa13.3□□□□□ -0.28
RPP40-201ENST00000319533 SLC6A16Q9GZN6 736 aa13.3□□□□□ -0.28
RPP40-201ENST00000319533 SPNS1Q9H2V7 528 aa13.3□□□□□ -0.28
RPP40-201ENST00000319533 MCCC2Q9HCC0 563 aa13.3□□□□□ -0.28
RPP40-201ENST00000319533 PRDM9Q9NQV7 894 aa13.3□□□□□ -0.28
RPP40-201ENST00000319533 PLSCR2Q9NRY7 297 aa13.3□□□□□ -0.28
RPP40-201ENST00000319533 ARL15Q9NXU5 204 aa13.3□□□□□ -0.28
RPP40-201ENST00000319533 PPIEQ9UNP9 301 aaKnown RBP13.3□□□□□ -0.28
RPP40-201ENST00000319533 KLF13Q9Y2Y9 288 aaPredicted RBP13.3□□□□□ -0.28
RPP40-201ENST00000319533 MTORP42345 2549 aa13.3□□□□□ -0.28
RPP40-201ENST00000319533 B4GALT2O60909 372 aa13.29□□□□□ -0.28
RPP40-201ENST00000319533 ENO2P09104 434 aaPredicted RBP13.29□□□□□ -0.28
RPP40-201ENST00000319533 ZNF888P0CJ79 500 aaPredicted RBP13.29□□□□□ -0.28
RPP40-201ENST00000319533 IGFBP2P18065 325 aa13.29□□□□□ -0.28
RPP40-201ENST00000319533 PTGER1P34995 402 aa13.29□□□□□ -0.28
RPP40-201ENST00000319533 IL2P60568 153 aa13.29□□□□□ -0.28
RPP40-201ENST00000319533 MRPS25P82663 173 aaKnown RBP13.29□□□□□ -0.28
RPP40-201ENST00000319533 REEP5Q00765 189 aa13.29□□□□□ -0.28
RPP40-201ENST00000319533 PDIA2Q13087 525 aaKnown RBP13.29□□□□□ -0.28
RPP40-201ENST00000319533 TERF2Q15554 542 aa13.29□□□□□ -0.28
RPP40-201ENST00000319533 ANKMY2Q8IV38 441 aa13.29□□□□□ -0.28
RPP40-201ENST00000319533 ANKRD53Q8N9V6 530 aa13.29□□□□□ -0.28
RPP40-201ENST00000319533 APCDD1LQ8NCL9 501 aa13.29□□□□□ -0.28
RPP40-201ENST00000319533 FAM57AQ8TBR7 257 aa13.29□□□□□ -0.28
RPP40-201ENST00000319533 SLC5A11Q8WWX8 675 aa13.29□□□□□ -0.28
RPP40-201ENST00000319533 ATL1Q8WXF7 558 aa13.29□□□□□ -0.28
RPP40-201ENST00000319533 NEIL2Q969S2 332 aa13.29□□□□□ -0.28
RPP40-201ENST00000319533 TMEM125Q96AQ2 219 aa13.29□□□□□ -0.28
RPP40-201ENST00000319533 PDLIM5Q96HC4 596 aaKnown RBP13.29□□□□□ -0.28
RPP40-201ENST00000319533 DPH5Q9H2P9 285 aa13.29□□□□□ -0.28
RPP40-201ENST00000319533 WHRNQ9P202 907 aa13.29□□□□□ -0.28
RPP40-201ENST00000319533 ITGB1BP2Q9UKP3 347 aa13.29□□□□□ -0.28
RPP40-201ENST00000319533 PPT2Q9UMR5 302 aa13.29□□□□□ -0.28
RPP40-201ENST00000319533 UTP11Q9Y3A2 253 aaKnown RBP13.29□□□□□ -0.28
RPP40-201ENST00000319533 HRH3Q9Y5N1 445 aa13.29□□□□□ -0.28
RPP40-201ENST00000319533 TEX264Q9Y6I9 313 aa13.29□□□□□ -0.28
RPP40-201ENST00000319533 MED13LQ71F56 2210 aa13.29□□□□□ -0.28
RPP40-201ENST00000319533 CTAGE15A4D2H0 777 aa13.28□□□□□ -0.28
RPP40-201ENST00000319533 URADA6NGE7 173 aa13.28□□□□□ -0.28
RPP40-201ENST00000319533 FCHO1O14526 889 aa13.28□□□□□ -0.28
RPP40-201ENST00000319533 RAD51CO43502 376 aa13.28□□□□□ -0.28
RPP40-201ENST00000319533 RNH1P13489 461 aaKnown RBP13.28□□□□□ -0.28
RPP40-201ENST00000319533 MAOAP21397 527 aa13.28□□□□□ -0.28
RPP40-201ENST00000319533 PTGS2P35354 604 aa13.28□□□□□ -0.28
RPP40-201ENST00000319533 MEOX1P50221 254 aa13.28□□□□□ -0.28
RPP40-201ENST00000319533 TLE4Q04727 773 aa13.28□□□□□ -0.28
RPP40-201ENST00000319533 CSHL1Q14406 222 aa13.28□□□□□ -0.28
RPP40-201ENST00000319533 CMPK2Q5EBM0 449 aa13.28□□□□□ -0.28
RPP40-201ENST00000319533 STEAP4Q687X5 459 aa13.28□□□□□ -0.28
RPP40-201ENST00000319533 C3P1Q6ZMU1 363 aa13.28□□□□□ -0.28
RPP40-201ENST00000319533 CTAGE6Q86UF2 777 aa13.28□□□□□ -0.28
RPP40-201ENST00000319533 CDH24Q86UP0 819 aa13.28□□□□□ -0.28
RPP40-201ENST00000319533 SULF2Q8IWU5 870 aa13.28□□□□□ -0.28
RPP40-201ENST00000319533 CYP4X1Q8N118 509 aa13.28□□□□□ -0.28
RPP40-201ENST00000319533 MARVELD2Q8N4S9 558 aa13.28□□□□□ -0.28
RPP40-201ENST00000319533 ZFP62Q8NB50 900 aaPredicted RBP13.28□□□□□ -0.28
RPP40-201ENST00000319533 FBXO36Q8NEA4 188 aa13.28□□□□□ -0.28
RPP40-201ENST00000319533 TRPV3Q8NET8 790 aa13.28□□□□□ -0.28
RPP40-201ENST00000319533 CREB3L4Q8TEY5 395 aa13.28□□□□□ -0.28
RPP40-201ENST00000319533 CA5BP1Q8WTZ4 195 aa13.28□□□□□ -0.28
RPP40-201ENST00000319533 CHTF18Q8WVB6 975 aa13.28□□□□□ -0.28
RPP40-201ENST00000319533 SDCCAG3Q96C92 435 aa13.28□□□□□ -0.28
RPP40-201ENST00000319533 TRIM54Q9BYV2 358 aa13.28□□□□□ -0.28
RPP40-201ENST00000319533 DEFB126Q9BYW3 111 aa13.28□□□□□ -0.28
RPP40-201ENST00000319533 RAB17Q9H0T7 212 aa13.28□□□□□ -0.28
RPP40-201ENST00000319533 PELI2Q9HAT8 420 aa13.28□□□□□ -0.28
RPP40-201ENST00000319533 NECTIN3Q9NQS3 549 aa13.28□□□□□ -0.28
RPP40-201ENST00000319533 COQ3Q9NZJ6 369 aa13.28□□□□□ -0.28
RPP40-201ENST00000319533 ZFATQ9P243 1243 aa13.28□□□□□ -0.28
RPP40-201ENST00000319533 MMACHCQ9Y4U1 282 aa13.28□□□□□ -0.28
RPP40-201ENST00000319533 A0A1B0GTH9 108 aa13.27□□□□□ -0.29
RPP40-201ENST00000319533 E7ESA3 106 aa13.27□□□□□ -0.29
RPP40-201ENST00000319533 KLRC4-KLRK1H3BQV0 150 aa13.27□□□□□ -0.29
RPP40-201ENST00000319533 PEX1O43933 1283 aa13.27□□□□□ -0.29
RPP40-201ENST00000319533 SERPIND1P05546 499 aa13.27□□□□□ -0.29
RPP40-201ENST00000319533 SERPINA6P08185 405 aa13.27□□□□□ -0.29
RPP40-201ENST00000319533 TFEBP19484 476 aa13.27□□□□□ -0.29
RPP40-201ENST00000319533 GPR143P51810 404 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms