RNA–Protein interactions for RNA: ENST00000318974.13

PTPN6-201, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTPN6, Length 2,245 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-201ENST00000318974 ALPLP05186 524 aa12.1□□□□□ -0.47
PTPN6-201ENST00000318974 SDC1P18827 310 aa12.1□□□□□ -0.47
PTPN6-201ENST00000318974 CSNK1EP49674 416 aaKnown RBP12.1□□□□□ -0.47
PTPN6-201ENST00000318974 CDK9P50750 372 aaKnown RBP12.1□□□□□ -0.47
PTPN6-201ENST00000318974 CCR8P51685 355 aa12.1□□□□□ -0.47
PTPN6-201ENST00000318974 C21orf59P57076 290 aa12.1□□□□□ -0.47
PTPN6-201ENST00000318974 PHC1P78364 1004 aa12.1□□□□□ -0.47
PTPN6-201ENST00000318974 MEF2AQ02078 507 aaPredicted RBP12.1□□□□□ -0.47
PTPN6-201ENST00000318974 CSTF1Q05048 431 aaKnown RBP12.1□□□□□ -0.47
PTPN6-201ENST00000318974 PRDX1Q06830 199 aaKnown RBP12.1□□□□□ -0.47
PTPN6-201ENST00000318974 DPY19L1Q2PZI1 675 aa12.1□□□□□ -0.47
PTPN6-201ENST00000318974 TBPL2Q6SJ96 375 aa12.1□□□□□ -0.47
PTPN6-201ENST00000318974 ZDHHC13Q8IUH4 622 aa12.1□□□□□ -0.47
PTPN6-201ENST00000318974 C1orf210Q8IVY1 113 aa12.1□□□□□ -0.47
PTPN6-201ENST00000318974 NAGSQ8N159 534 aa12.1□□□□□ -0.47
PTPN6-201ENST00000318974 FAM46DQ8NEK8 389 aa12.1□□□□□ -0.47
PTPN6-201ENST00000318974 ABHD11Q8NFV4 315 aa12.1□□□□□ -0.47
PTPN6-201ENST00000318974 SLC37A2Q8TED4 501 aa12.1□□□□□ -0.47
PTPN6-201ENST00000318974 PATE1Q8WXA2 126 aa12.1□□□□□ -0.47
PTPN6-201ENST00000318974 FAM162AQ96A26 154 aa12.1□□□□□ -0.47
PTPN6-201ENST00000318974 SDCCAG3Q96C92 435 aa12.1□□□□□ -0.47
PTPN6-201ENST00000318974 SLC47A1Q96FL8 570 aa12.1□□□□□ -0.47
PTPN6-201ENST00000318974 FCRL1Q96LA6 429 aa12.1□□□□□ -0.47
PTPN6-201ENST00000318974 AIF1LQ9BQI0 150 aa12.1□□□□□ -0.47
PTPN6-201ENST00000318974 SPNS1Q9H2V7 528 aa12.1□□□□□ -0.47
PTPN6-201ENST00000318974 CUEDC1Q9NWM3 386 aaPredicted RBP12.1□□□□□ -0.47
PTPN6-201ENST00000318974 ETAA1Q9NY74 926 aa12.1□□□□□ -0.47
PTPN6-201ENST00000318974 CPNE7Q9UBL6 633 aa12.1□□□□□ -0.47
PTPN6-201ENST00000318974 SPASTQ9UBP0 616 aa12.1□□□□□ -0.47
PTPN6-201ENST00000318974 VPS29Q9UBQ0 182 aa12.1□□□□□ -0.47
PTPN6-201ENST00000318974 MAGEB17A8MXT2 336 aa12.09□□□□□ -0.47
PTPN6-201ENST00000318974 PRMT3O60678 531 aa12.09□□□□□ -0.47
PTPN6-201ENST00000318974 HOXB9P17482 250 aaPredicted RBP12.09□□□□□ -0.47
PTPN6-201ENST00000318974 AMD1P17707 334 aa12.09□□□□□ -0.47
PTPN6-201ENST00000318974 AFF3P51826 1226 aaKnown RBP12.09□□□□□ -0.47
PTPN6-201ENST00000318974 CDH15P55291 814 aa12.09□□□□□ -0.47
PTPN6-201ENST00000318974 HNRNPKP61978 463 aaKnown RBP eCLIP12.09□□□□□ -0.47
PTPN6-201ENST00000318974 UBE2IP63279 158 aaKnown RBP12.09□□□□□ -0.47
PTPN6-201ENST00000318974 PHEXP78562 749 aa12.09□□□□□ -0.47
PTPN6-201ENST00000318974 ABATP80404 500 aa12.09□□□□□ -0.47
PTPN6-201ENST00000318974 EPS8Q12929 822 aa12.09□□□□□ -0.47
PTPN6-201ENST00000318974 PLCL1Q15111 1095 aa12.09□□□□□ -0.47
PTPN6-201ENST00000318974 OTUD3Q5T2D3 398 aaPredicted RBP12.09□□□□□ -0.47
PTPN6-201ENST00000318974 ENPP6Q6UWR7 440 aa12.09□□□□□ -0.47
PTPN6-201ENST00000318974 TMIGD1Q6UXZ0 262 aa12.09□□□□□ -0.47
PTPN6-201ENST00000318974 GPR180Q86V85 440 aa12.09□□□□□ -0.47
PTPN6-201ENST00000318974 GKN2Q86XP6 184 aa12.09□□□□□ -0.47
PTPN6-201ENST00000318974 SVOPLQ8N434 492 aa12.09□□□□□ -0.47
PTPN6-201ENST00000318974 FBXO30Q8TB52 745 aa12.09□□□□□ -0.47
PTPN6-201ENST00000318974 ZDHHC1Q8WTX9 485 aa12.09□□□□□ -0.47
PTPN6-201ENST00000318974 FAM120BQ96EK7 910 aaKnown RBP12.09□□□□□ -0.47
PTPN6-201ENST00000318974 APIPQ96GX9 242 aa12.09□□□□□ -0.47
PTPN6-201ENST00000318974 FAM210AQ96ND0 272 aa12.09□□□□□ -0.47
PTPN6-201ENST00000318974 TSSK3Q96PN8 268 aa12.09□□□□□ -0.47
PTPN6-201ENST00000318974 SRMSQ9H3Y6 488 aa12.09□□□□□ -0.47
PTPN6-201ENST00000318974 DCAF13Q9NV06 445 aaKnown RBP12.09□□□□□ -0.47
PTPN6-201ENST00000318974 TSC22D4Q9Y3Q8 395 aa12.09□□□□□ -0.47
PTPN6-201ENST00000318974 LRP4O75096 1905 aa12.09□□□□□ -0.47
PTPN6-201ENST00000318974 PLXND1Q9Y4D7 1925 aa12.09□□□□□ -0.47
PTPN6-201ENST00000318974 ISM1B1AKI9 464 aa12.09□□□□□ -0.47
PTPN6-201ENST00000318974 H7BY64 318 aa12.09□□□□□ -0.47
PTPN6-201ENST00000318974 FOXE1O00358 373 aaPredicted RBP12.09□□□□□ -0.47
PTPN6-201ENST00000318974 CREG1O75629 220 aa12.09□□□□□ -0.47
PTPN6-201ENST00000318974 SEC24DO94855 1032 aaPredicted RBP12.09□□□□□ -0.47
PTPN6-201ENST00000318974 CCNDBP1O95273 360 aa12.09□□□□□ -0.47
PTPN6-201ENST00000318974 CLIC3O95833 236 aa12.09□□□□□ -0.47
PTPN6-201ENST00000318974 CHRM5P08912 532 aaPredicted RBP12.09□□□□□ -0.47
PTPN6-201ENST00000318974 PRPS1L1P21108 318 aa12.09□□□□□ -0.47
PTPN6-201ENST00000318974 PEBP1P30086 187 aaKnown RBP12.09□□□□□ -0.47
PTPN6-201ENST00000318974 SLC5A2P31639 672 aa12.09□□□□□ -0.47
PTPN6-201ENST00000318974 RPS13P62277 151 aaKnown RBP12.09□□□□□ -0.47
PTPN6-201ENST00000318974 ABHD18Q0P651 414 aa12.09□□□□□ -0.47
PTPN6-201ENST00000318974 TEAD4Q15561 434 aa12.09□□□□□ -0.47
PTPN6-201ENST00000318974 GTDC1Q4AE62 458 aa12.09□□□□□ -0.47
PTPN6-201ENST00000318974 LYSMD4Q5XG99 296 aa12.09□□□□□ -0.47
PTPN6-201ENST00000318974 ADNP2Q6IQ32 1131 aa12.09□□□□□ -0.47
PTPN6-201ENST00000318974 GPR141Q7Z602 305 aa12.09□□□□□ -0.47
PTPN6-201ENST00000318974 SLC9B2Q86UD5 537 aa12.09□□□□□ -0.47
PTPN6-201ENST00000318974 MAML2Q8IZL2 1156 aaPredicted RBP12.09□□□□□ -0.47
PTPN6-201ENST00000318974 CLEC4FQ8N1N0 589 aa12.09□□□□□ -0.47
PTPN6-201ENST00000318974 ZNF740Q8NDX6 193 aa12.09□□□□□ -0.47
PTPN6-201ENST00000318974 OR4K1Q8NGD4 311 aa12.09□□□□□ -0.47
PTPN6-201ENST00000318974 PNPT1Q8TCS8 783 aaKnown RBP12.09□□□□□ -0.47
PTPN6-201ENST00000318974 LMX1AQ8TE12 382 aa12.09□□□□□ -0.47
PTPN6-201ENST00000318974 TMIGD2Q96BF3 282 aa12.09□□□□□ -0.47
PTPN6-201ENST00000318974 METTL2AQ96IZ6 378 aaKnown RBP12.09□□□□□ -0.47
PTPN6-201ENST00000318974 PRAP1Q96NZ9 151 aa12.09□□□□□ -0.47
PTPN6-201ENST00000318974 TBCDQ9BTW9 1192 aa12.09□□□□□ -0.47
PTPN6-201ENST00000318974 PITHD1Q9GZP4 211 aaPredicted RBP12.09□□□□□ -0.47
PTPN6-201ENST00000318974 MRPS30Q9NP92 439 aaKnown RBP12.09□□□□□ -0.47
PTPN6-201ENST00000318974 SPHK1Q9NYA1 384 aa12.09□□□□□ -0.47
PTPN6-201ENST00000318974 DOLKQ9UPQ8 538 aa12.09□□□□□ -0.47
PTPN6-201ENST00000318974 G3V2T6 193 aa12.08□□□□□ -0.48
PTPN6-201ENST00000318974 ZNF701M0R085 212 aaPredicted RBP12.08□□□□□ -0.48
PTPN6-201ENST00000318974 TRMUO75648 421 aaKnown RBP12.08□□□□□ -0.48
PTPN6-201ENST00000318974 CST1P01037 141 aa12.08□□□□□ -0.48
PTPN6-201ENST00000318974 THRBP10828 461 aa12.08□□□□□ -0.48
PTPN6-201ENST00000318974 TACR1P25103 407 aa12.08□□□□□ -0.48
PTPN6-201ENST00000318974 PTPN6P29350 595 aa12.08□□□□□ -0.48
PTPN6-201ENST00000318974 CMPK1P30085 196 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms