RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 ALOX12P18054 663 aa14.62□□□□□ -0.07
PDLIM5-202ENST00000318007 TPP2P29144 1249 aaPredicted RBP14.62□□□□□ -0.07
PDLIM5-202ENST00000318007 SERPINB1P30740 379 aa14.62□□□□□ -0.07
PDLIM5-202ENST00000318007 TIA1P31483 386 aaKnown RBP eCLIP14.62□□□□□ -0.074e-7■■■■■ 27.1
PDLIM5-202ENST00000318007 OR1D4P47884 311 aa14.62□□□□□ -0.07
PDLIM5-202ENST00000318007 ALDH9A1P49189 494 aa14.62□□□□□ -0.07
PDLIM5-202ENST00000318007 MC1RQ01726 317 aa14.62□□□□□ -0.07
PDLIM5-202ENST00000318007 ACY1Q03154 408 aa14.62□□□□□ -0.07
PDLIM5-202ENST00000318007 ADPRMQ3LIE5 342 aa14.62□□□□□ -0.07
PDLIM5-202ENST00000318007 CYP20A1Q6UW02 462 aa14.62□□□□□ -0.07
PDLIM5-202ENST00000318007 NUDT13Q86X67 352 aa14.62□□□□□ -0.07
PDLIM5-202ENST00000318007 EFCAB3Q8N7B9 438 aa14.62□□□□□ -0.07
PDLIM5-202ENST00000318007 ACOT4Q8N9L9 421 aa14.62□□□□□ -0.07
PDLIM5-202ENST00000318007 UCN3Q969E3 161 aa14.62□□□□□ -0.07
PDLIM5-202ENST00000318007 GAL3ST3Q96A11 431 aa14.62□□□□□ -0.07
PDLIM5-202ENST00000318007 THAP11Q96EK4 314 aa14.62□□□□□ -0.07
PDLIM5-202ENST00000318007 MMABQ96EY8 250 aaPredicted RBP14.62□□□□□ -0.07
PDLIM5-202ENST00000318007 YIPF2Q9BWQ6 316 aa14.62□□□□□ -0.07
PDLIM5-202ENST00000318007 PRDM7Q9NQW5 492 aa14.62□□□□□ -0.07
PDLIM5-202ENST00000318007 CUTCQ9NTM9 273 aa14.62□□□□□ -0.07
PDLIM5-202ENST00000318007 SIDT1Q9NXL6 827 aaKnown RBP14.62□□□□□ -0.07
PDLIM5-202ENST00000318007 EIF3LQ9Y262 564 aaKnown RBP14.62□□□□□ -0.07
PDLIM5-202ENST00000318007 TSC22D4Q9Y3Q8 395 aa14.62□□□□□ -0.07
PDLIM5-202ENST00000318007 TMEM184BQ9Y519 407 aaPredicted RBP14.62□□□□□ -0.07
PDLIM5-202ENST00000318007 SCN2AQ99250 2005 aa14.61□□□□□ -0.07
PDLIM5-202ENST00000318007 TEX51A0A1B0GUA7 166 aa14.61□□□□□ -0.07
PDLIM5-202ENST00000318007 WASHC1A8K0Z3 465 aa14.61□□□□□ -0.07
PDLIM5-202ENST00000318007 H3BMH7 237 aa14.61□□□□□ -0.07
PDLIM5-202ENST00000318007 SLC30A4O14863 429 aa14.61□□□□□ -0.07
PDLIM5-202ENST00000318007 MYO1DO94832 1006 aa14.61□□□□□ -0.07
PDLIM5-202ENST00000318007 JMJD7P0C870 316 aa14.61□□□□□ -0.07
PDLIM5-202ENST00000318007 CEACAM1P13688 526 aa14.61□□□□□ -0.07
PDLIM5-202ENST00000318007 HIST1H1TP22492 207 aaPredicted RBP14.61□□□□□ -0.07
PDLIM5-202ENST00000318007 MAPK12P53778 367 aa14.61□□□□□ -0.07
PDLIM5-202ENST00000318007 FOXL2P58012 376 aa14.61□□□□□ -0.07
PDLIM5-202ENST00000318007 TAS2R50P59544 299 aa14.61□□□□□ -0.07
PDLIM5-202ENST00000318007 UFM1P61960 85 aa14.61□□□□□ -0.07
PDLIM5-202ENST00000318007 EMX2Q04743 252 aa14.61□□□□□ -0.07
PDLIM5-202ENST00000318007 SLAMF1Q13291 335 aa14.61□□□□□ -0.07
PDLIM5-202ENST00000318007 GRM7Q14831 915 aa14.61□□□□□ -0.07
PDLIM5-202ENST00000318007 PRTGQ2VWP7 1150 aa14.61□□□□□ -0.07
PDLIM5-202ENST00000318007 TCTE1Q5JU00 501 aa14.61□□□□□ -0.07
PDLIM5-202ENST00000318007 C10orf62Q5T681 223 aaPredicted RBP14.61□□□□□ -0.07
PDLIM5-202ENST00000318007 PPP1R3BQ86XI6 285 aa14.61□□□□□ -0.07
PDLIM5-202ENST00000318007 CHCHD4Q8N4Q1 142 aa14.61□□□□□ -0.07
PDLIM5-202ENST00000318007 SLC38A9Q8NBW4 561 aa14.61□□□□□ -0.07
PDLIM5-202ENST00000318007 CLIP3Q96DZ5 547 aa14.61□□□□□ -0.07
PDLIM5-202ENST00000318007 LRRC37BQ96QE4 947 aa14.61□□□□□ -0.07
PDLIM5-202ENST00000318007 NDC1Q9BTX1 674 aa14.61□□□□□ -0.07
PDLIM5-202ENST00000318007 CCDC28BQ9BUN5 200 aa14.61□□□□□ -0.07
PDLIM5-202ENST00000318007 STRADBQ9C0K7 418 aa14.61□□□□□ -0.07
PDLIM5-202ENST00000318007 WDR70Q9NW82 654 aa14.61□□□□□ -0.07
PDLIM5-202ENST00000318007 TEX10Q9NXF1 929 aaPredicted RBP14.61□□□□□ -0.07
PDLIM5-202ENST00000318007 AHSPQ9NZD4 102 aa14.61□□□□□ -0.07
PDLIM5-202ENST00000318007 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.61□□□□□ -0.07
PDLIM5-202ENST00000318007 TRIM33Q9UPN9 1127 aa14.61□□□□□ -0.07
PDLIM5-202ENST00000318007 SATB2Q9UPW6 733 aa14.61□□□□□ -0.07
PDLIM5-202ENST00000318007 FRYQ5TBA9 3013 aa14.61□□□□□ -0.07
PDLIM5-202ENST00000318007 A0A1W2PNU3 283 aaPredicted RBP14.6□□□□□ -0.07
PDLIM5-202ENST00000318007 URADA6NGE7 173 aa14.6□□□□□ -0.07
PDLIM5-202ENST00000318007 KLHL18O94889 574 aa14.6□□□□□ -0.07
PDLIM5-202ENST00000318007 ZNF28P17035 718 aa14.6□□□□□ -0.07
PDLIM5-202ENST00000318007 EFNA1P20827 205 aaPredicted RBP14.6□□□□□ -0.07
PDLIM5-202ENST00000318007 CSRP1P21291 193 aaKnown RBP14.6□□□□□ -0.07
PDLIM5-202ENST00000318007 ATP5A1P25705 553 aaKnown RBP14.6□□□□□ -0.07
PDLIM5-202ENST00000318007 GSTM2P28161 218 aa14.6□□□□□ -0.07
PDLIM5-202ENST00000318007 CCKBRP32239 447 aa14.6□□□□□ -0.07
PDLIM5-202ENST00000318007 RELAQ04206 551 aa14.6□□□□□ -0.07
PDLIM5-202ENST00000318007 ZNF33BQ06732 778 aa14.6□□□□□ -0.07
PDLIM5-202ENST00000318007 RNF165Q6ZSG1 346 aa14.6□□□□□ -0.07
PDLIM5-202ENST00000318007 FITM2Q8N6M3 262 aa14.6□□□□□ -0.07
PDLIM5-202ENST00000318007 TTC29Q8NA56 475 aaPredicted RBP14.6□□□□□ -0.07
PDLIM5-202ENST00000318007 FAM47BQ8NA70 645 aa14.6□□□□□ -0.07
PDLIM5-202ENST00000318007 DEPDC7Q96QD5 511 aa14.6□□□□□ -0.07
PDLIM5-202ENST00000318007 MAPKAP1Q9BPZ7 522 aa14.6□□□□□ -0.07
PDLIM5-202ENST00000318007 MYLK2Q9H1R3 596 aa14.6□□□□□ -0.07
PDLIM5-202ENST00000318007 ANKHQ9HCJ1 492 aa14.6□□□□□ -0.07
PDLIM5-202ENST00000318007 SAR1AQ9NR31 198 aa14.6□□□□□ -0.07
PDLIM5-202ENST00000318007 SLC39A1Q9NY26 324 aa14.6□□□□□ -0.07
PDLIM5-202ENST00000318007 AKAP7Q9P0M2 348 aaPredicted RBP14.6□□□□□ -0.07
PDLIM5-202ENST00000318007 MYOCOSA0A1B0GUC4 107 aa14.6□□□□□ -0.07
PDLIM5-202ENST00000318007 SERTM1A2A2V5 107 aa14.6□□□□□ -0.07
PDLIM5-202ENST00000318007 OR2W5A6NFC9 320 aa14.6□□□□□ -0.07
PDLIM5-202ENST00000318007 FOXS1O43638 330 aa14.6□□□□□ -0.07
PDLIM5-202ENST00000318007 IL3P08700 152 aa14.6□□□□□ -0.07
PDLIM5-202ENST00000318007 STX1BP61266 288 aa14.6□□□□□ -0.07
PDLIM5-202ENST00000318007 PLIN5Q00G26 463 aa14.6□□□□□ -0.07
PDLIM5-202ENST00000318007 TRA2AQ13595 282 aaKnown RBP eCLIP14.6□□□□□ -0.07
PDLIM5-202ENST00000318007 ERV3-1Q14264 604 aa14.6□□□□□ -0.07
PDLIM5-202ENST00000318007 TMEM35AQ53FP2 167 aa14.6□□□□□ -0.07
PDLIM5-202ENST00000318007 CDCP2Q5VXM1 449 aa14.6□□□□□ -0.07
PDLIM5-202ENST00000318007 GK5Q6ZS86 529 aa14.6□□□□□ -0.07
PDLIM5-202ENST00000318007 POU5F2Q8N7G0 328 aa14.6□□□□□ -0.07
PDLIM5-202ENST00000318007 BMPERQ8N8U9 685 aa14.6□□□□□ -0.07
PDLIM5-202ENST00000318007 C11orf24Q96F05 449 aaPredicted RBP14.6□□□□□ -0.07
PDLIM5-202ENST00000318007 TXLNGQ9NUQ3 528 aa14.6□□□□□ -0.07
PDLIM5-202ENST00000318007 AIG1Q9NVV5 245 aa14.6□□□□□ -0.07
PDLIM5-202ENST00000318007 B3GALT1Q9Y5Z6 326 aa14.6□□□□□ -0.07
PDLIM5-202ENST00000318007 AKAP13Q12802 2813 aa14.59□□□□□ -0.07
PDLIM5-202ENST00000318007 LOC100653049A0A140TA62 436 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms