RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 POLMQ9NP87 494 aaPredicted RBP13.27□□□□□ -0.28
SPAST-201ENST00000315285 TLR9Q9NR96 1032 aa13.27□□□□□ -0.28
SPAST-201ENST00000315285 SPHK2Q9NRA0 654 aa13.27□□□□□ -0.28
SPAST-201ENST00000315285 SLCO3A1Q9UIG8 710 aa13.27□□□□□ -0.28
SPAST-201ENST00000315285 WDR45Q9Y484 360 aa13.27□□□□□ -0.28
SPAST-201ENST00000315285 GINS1Q14691 196 aa13.27□□□□□ -0.29
SPAST-201ENST00000315285 TRAM2Q15035 370 aa13.27□□□□□ -0.29
SPAST-201ENST00000315285 RASSF6Q6ZTQ3 369 aa13.27□□□□□ -0.29
SPAST-201ENST00000315285 CCDC36Q8IYA8 594 aa13.27□□□□□ -0.29
SPAST-201ENST00000315285 ZNF676Q8N7Q3 588 aa13.27□□□□□ -0.29
SPAST-201ENST00000315285 NR4A3Q92570 626 aa13.27□□□□□ -0.29
SPAST-201ENST00000315285 PIP5K1AQ99755 562 aa13.27□□□□□ -0.29
SPAST-201ENST00000315285 GAL3ST1Q99999 423 aa13.27□□□□□ -0.29
SPAST-201ENST00000315285 LGR4Q9BXB1 951 aa13.27□□□□□ -0.29
SPAST-201ENST00000315285 ANKRD60Q9BZ19 345 aa13.27□□□□□ -0.29
SPAST-201ENST00000315285 PAK1IP1Q9NWT1 392 aaPredicted RBP13.27□□□□□ -0.29
SPAST-201ENST00000315285 CDC14AQ9UNH5 594 aa13.27□□□□□ -0.29
SPAST-201ENST00000315285 LATS1O95835 1130 aa13.27□□□□□ -0.29
SPAST-201ENST00000315285 CDKN1CP49918 316 aaPredicted RBP13.27□□□□□ -0.29
SPAST-201ENST00000315285 SLC3A1Q07837 685 aa13.27□□□□□ -0.29
SPAST-201ENST00000315285 ANKDD1AQ495B1 522 aa13.27□□□□□ -0.29
SPAST-201ENST00000315285 TRIM73Q86UV7 250 aa13.27□□□□□ -0.29
SPAST-201ENST00000315285 GPR150Q8NGU9 434 aa13.27□□□□□ -0.29
SPAST-201ENST00000315285 LRIG1Q96JA1 1093 aa13.27□□□□□ -0.29
SPAST-201ENST00000315285 SPATA9Q9BWV2 254 aa13.27□□□□□ -0.29
SPAST-201ENST00000315285 DKK3Q9UBP4 350 aa13.27□□□□□ -0.29
SPAST-201ENST00000315285 CITO14578 2027 aa13.27□□□□□ -0.29
SPAST-201ENST00000315285 FOXD2O60548 495 aaPredicted RBP13.27□□□□□ -0.29
SPAST-201ENST00000315285 ITGA10O75578 1167 aa13.27□□□□□ -0.29
SPAST-201ENST00000315285 RAB36O95755 333 aa13.27□□□□□ -0.29
SPAST-201ENST00000315285 TACSTD2P09758 323 aa13.27□□□□□ -0.29
SPAST-201ENST00000315285 GM2AP17900 193 aa13.27□□□□□ -0.29
SPAST-201ENST00000315285 ARCN1P48444 511 aaKnown RBP13.27□□□□□ -0.29
SPAST-201ENST00000315285 FOXA1P55317 472 aa13.27□□□□□ -0.29
SPAST-201ENST00000315285 TBPL1P62380 186 aa13.27□□□□□ -0.29
SPAST-201ENST00000315285 ENPP2Q13822 863 aa13.27□□□□□ -0.29
SPAST-201ENST00000315285 MEDAGQ5VYS4 303 aa13.27□□□□□ -0.29
SPAST-201ENST00000315285 ZNF367Q7RTV3 350 aa13.27□□□□□ -0.29
SPAST-201ENST00000315285 ARHGAP12Q8IWW6 846 aa13.27□□□□□ -0.29
SPAST-201ENST00000315285 APCDD1Q8J025 514 aa13.27□□□□□ -0.29
SPAST-201ENST00000315285 C1orf216Q8TAB5 229 aa13.27□□□□□ -0.29
SPAST-201ENST00000315285 C11orf49Q9H6J7 331 aa13.27□□□□□ -0.29
SPAST-201ENST00000315285 BACE2Q9Y5Z0 518 aa13.27□□□□□ -0.29
SPAST-201ENST00000315285 OR6C70A6NIJ9 312 aa13.26□□□□□ -0.29
SPAST-201ENST00000315285 ZNF879B4DU55 563 aa13.26□□□□□ -0.29
SPAST-201ENST00000315285 SLC1A7O00341 560 aa13.26□□□□□ -0.29
SPAST-201ENST00000315285 PHC1P78364 1004 aa13.26□□□□□ -0.29
SPAST-201ENST00000315285 ZNF45Q02386 682 aa13.26□□□□□ -0.29
SPAST-201ENST00000315285 DSG2Q14126 1118 aa13.26□□□□□ -0.29
SPAST-201ENST00000315285 PAGE3Q5JUK9 113 aa13.26□□□□□ -0.29
SPAST-201ENST00000315285 LETMD1Q6P1Q0 360 aa13.26□□□□□ -0.29
SPAST-201ENST00000315285 NUP54Q7Z3B4 507 aa13.26□□□□□ -0.29
SPAST-201ENST00000315285 TOMM5Q8N4H5 51 aa13.26□□□□□ -0.29
SPAST-201ENST00000315285 LGALS12Q96DT0 336 aa13.26□□□□□ -0.29
SPAST-201ENST00000315285 SLC29A1Q99808 456 aa13.26□□□□□ -0.29
SPAST-201ENST00000315285 EXO5Q9H790 373 aa13.26□□□□□ -0.29
SPAST-201ENST00000315285 PLEKHA1Q9HB21 404 aa13.26□□□□□ -0.29
SPAST-201ENST00000315285 POLE3Q9NRF9 147 aa13.26□□□□□ -0.29
SPAST-201ENST00000315285 ANKRD12Q6UB98 2062 aa13.26□□□□□ -0.29
SPAST-201ENST00000315285 ZBTB42B2RXF5 422 aa13.26□□□□□ -0.29
SPAST-201ENST00000315285 ARL6IP5O75915 188 aa13.26□□□□□ -0.29
SPAST-201ENST00000315285 CD9P21926 228 aa13.26□□□□□ -0.29
SPAST-201ENST00000315285 IST1P53990 364 aa13.26□□□□□ -0.29
SPAST-201ENST00000315285 INHBCP55103 352 aa13.26□□□□□ -0.29
SPAST-201ENST00000315285 GABARAPL2P60520 117 aa13.26□□□□□ -0.29
SPAST-201ENST00000315285 CD83Q01151 205 aa13.26□□□□□ -0.29
SPAST-201ENST00000315285 IRF5Q13568 498 aa13.26□□□□□ -0.29
SPAST-201ENST00000315285 CD200R1Q8TD46 325 aa13.26□□□□□ -0.29
SPAST-201ENST00000315285 NEK7Q8TDX7 302 aa13.26□□□□□ -0.29
SPAST-201ENST00000315285 ASPNQ9BXN1 380 aa13.26□□□□□ -0.29
SPAST-201ENST00000315285 TREX1Q9NSU2 369 aa13.26□□□□□ -0.29
SPAST-201ENST00000315285 UPB1Q9UBR1 384 aa13.26□□□□□ -0.29
SPAST-201ENST00000315285 ACTL7AQ9Y615 435 aa13.26□□□□□ -0.29
SPAST-201ENST00000315285 MYH4Q9Y623 1939 aa13.26□□□□□ -0.29
SPAST-201ENST00000315285 SMIM30A4D0T7 59 aa13.26□□□□□ -0.29
SPAST-201ENST00000315285 J3QLW9 94 aa13.26□□□□□ -0.29
SPAST-201ENST00000315285 ZNF19P17023 458 aa13.26□□□□□ -0.29
SPAST-201ENST00000315285 MASP1P48740 699 aa13.26□□□□□ -0.29
SPAST-201ENST00000315285 MARCH8Q5T0T0 291 aa13.26□□□□□ -0.29
SPAST-201ENST00000315285 RELTQ969Z4 430 aa13.26□□□□□ -0.29
SPAST-201ENST00000315285 ABCG4Q9H172 646 aa13.26□□□□□ -0.29
SPAST-201ENST00000315285 ELOVL2Q9NXB9 296 aa13.26□□□□□ -0.29
SPAST-201ENST00000315285 ZNF224Q9NZL3 707 aa13.26□□□□□ -0.29
SPAST-201ENST00000315285 TMEM181Q9P2C4 612 aa13.26□□□□□ -0.29
SPAST-201ENST00000315285 CMAHPQ9Y471 501 aa13.26□□□□□ -0.29
SPAST-201ENST00000315285 AKAP11Q9UKA4 1901 aa13.26□□□□□ -0.29
SPAST-201ENST00000315285 COQ9O75208 318 aa13.26□□□□□ -0.29
SPAST-201ENST00000315285 SLITRK5O94991 958 aa13.26□□□□□ -0.29
SPAST-201ENST00000315285 YES1P07947 543 aa13.26□□□□□ -0.29
SPAST-201ENST00000315285 CCL5P13501 91 aa13.26□□□□□ -0.29
SPAST-201ENST00000315285 ADAM8P78325 824 aa13.26□□□□□ -0.29
SPAST-201ENST00000315285 ADAM15Q13444 863 aa13.26□□□□□ -0.29
SPAST-201ENST00000315285 PKDCCQ504Y2 493 aa13.26□□□□□ -0.29
SPAST-201ENST00000315285 C3orf58Q8NDZ4 430 aa13.26□□□□□ -0.29
SPAST-201ENST00000315285 FNDC8Q8TC99 324 aa13.26□□□□□ -0.29
SPAST-201ENST00000315285 OSTF1Q92882 214 aa13.26□□□□□ -0.29
SPAST-201ENST00000315285 MCHR1Q99705 422 aa13.26□□□□□ -0.29
SPAST-201ENST00000315285 CHIAQ9BZP6 476 aa13.26□□□□□ -0.29
SPAST-201ENST00000315285 AXIN1O15169 862 aa13.25□□□□□ -0.29
SPAST-201ENST00000315285 PRODHO43272 600 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms