RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 TMEM207Q6UWW9 146 aa13.12□□□□□ -0.31
DDX54-202ENST00000314045 ADGRG6Q86SQ4 1221 aa13.12□□□□□ -0.31
DDX54-202ENST00000314045 RASGRP3Q8IV61 690 aa13.12□□□□□ -0.31
DDX54-202ENST00000314045 METTL27Q8N6F8 245 aaPredicted RBP13.12□□□□□ -0.31
DDX54-202ENST00000314045 OR10G2Q8NGC3 310 aa13.12□□□□□ -0.31
DDX54-202ENST00000314045 MIEF2Q96C03 454 aa13.12□□□□□ -0.31
DDX54-202ENST00000314045 POLR2J3Q9H1A7 115 aaKnown RBP13.12□□□□□ -0.31
DDX54-202ENST00000314045 SLC6A17Q9H1V8 727 aa13.12□□□□□ -0.31
DDX54-202ENST00000314045 SARDHQ9UL12 918 aa13.12□□□□□ -0.31
DDX54-202ENST00000314045 EGFP01133 1207 aa13.12□□□□□ -0.31
DDX54-202ENST00000314045 UQCRC2P22695 453 aa13.12□□□□□ -0.31
DDX54-202ENST00000314045 JAK1P23458 1154 aa13.12□□□□□ -0.31
DDX54-202ENST00000314045 HTR1EP28566 365 aa13.12□□□□□ -0.31
DDX54-202ENST00000314045 DNAJA1P31689 397 aaKnown RBP13.12□□□□□ -0.31
DDX54-202ENST00000314045 OR4D2P58180 307 aa13.12□□□□□ -0.31
DDX54-202ENST00000314045 MERTKQ12866 999 aa13.12□□□□□ -0.31
DDX54-202ENST00000314045 TARDBPQ13148 414 aaKnown RBP eCLIP13.12□□□□□ -0.312e-9■■■■■ 31.7
DDX54-202ENST00000314045 CTC1Q2NKJ3 1217 aa13.12□□□□□ -0.31
DDX54-202ENST00000314045 LUZP2Q86TE4 346 aa13.12□□□□□ -0.31
DDX54-202ENST00000314045 CLECL1Q8IZS7 167 aa13.12□□□□□ -0.31
DDX54-202ENST00000314045 LGI4Q8N135 537 aa13.12□□□□□ -0.31
DDX54-202ENST00000314045 OR52E1Q8NGJ3 308 aa13.12□□□□□ -0.31
DDX54-202ENST00000314045 KAT2AQ92830 837 aa13.12□□□□□ -0.31
DDX54-202ENST00000314045 HSPA12BQ96MM6 686 aa13.12□□□□□ -0.31
DDX54-202ENST00000314045 PELI2Q9HAT8 420 aa13.12□□□□□ -0.31
DDX54-202ENST00000314045 STOML2Q9UJZ1 356 aa13.12□□□□□ -0.31
DDX54-202ENST00000314045 YBX2Q9Y2T7 364 aaKnown RBP13.12□□□□□ -0.31
DDX54-202ENST00000314045 IFNGP01579 166 aa13.11□□□□□ -0.31
DDX54-202ENST00000314045 AGXTP21549 392 aa13.11□□□□□ -0.31
DDX54-202ENST00000314045 CD6P30203 668 aa13.11□□□□□ -0.31
DDX54-202ENST00000314045 MAGEA12P43365 314 aa13.11□□□□□ -0.31
DDX54-202ENST00000314045 MASP1P48740 699 aa13.11□□□□□ -0.31
DDX54-202ENST00000314045 INAQ16352 499 aa13.11□□□□□ -0.31
DDX54-202ENST00000314045 GPR107Q5VW38 600 aa13.11□□□□□ -0.31
DDX54-202ENST00000314045 ALG1LQ6GMV1 187 aa13.11□□□□□ -0.31
DDX54-202ENST00000314045 ASTLQ6HA08 431 aaPredicted RBP13.11□□□□□ -0.31
DDX54-202ENST00000314045 SLC36A4Q6YBV0 504 aa13.11□□□□□ -0.31
DDX54-202ENST00000314045 SLC22A15Q8IZD6 547 aa13.11□□□□□ -0.31
DDX54-202ENST00000314045 LILRA3Q8N6C8 439 aaPredicted RBP13.11□□□□□ -0.31
DDX54-202ENST00000314045 ACPTQ9BZG2 426 aa13.11□□□□□ -0.31
DDX54-202ENST00000314045 PAPOLBQ9NRJ5 636 aaKnown RBP13.11□□□□□ -0.31
DDX54-202ENST00000314045 N6AMT1Q9Y5N5 214 aa13.11□□□□□ -0.31
DDX54-202ENST00000314045 C1orf226A1L170 272 aa13.11□□□□□ -0.31
DDX54-202ENST00000314045 C9J4A7 227 aa13.11□□□□□ -0.31
DDX54-202ENST00000314045 COQ9O75208 318 aa13.11□□□□□ -0.31
DDX54-202ENST00000314045 IL1RNP18510 177 aa13.11□□□□□ -0.31
DDX54-202ENST00000314045 KDELR2P33947 212 aa13.11□□□□□ -0.31
DDX54-202ENST00000314045 ZNF267Q14586 743 aaPredicted RBP13.11□□□□□ -0.31
DDX54-202ENST00000314045 TMEM52BQ4KMG9 183 aa13.11□□□□□ -0.31
DDX54-202ENST00000314045 OR4C11Q6IEV9 310 aa13.11□□□□□ -0.31
DDX54-202ENST00000314045 C16orf78Q8WTQ4 265 aa13.11□□□□□ -0.31
DDX54-202ENST00000314045 UHRF1Q96T88 793 aaPredicted RBP13.11□□□□□ -0.31
DDX54-202ENST00000314045 KCNK12Q9HB15 430 aa13.11□□□□□ -0.31
DDX54-202ENST00000314045 ANKMY1Q9P2S6 941 aa13.11□□□□□ -0.31
DDX54-202ENST00000314045 WDR45Q9Y484 360 aa13.11□□□□□ -0.31
DDX54-202ENST00000314045 FAM221BA6H8Z2 402 aa13.11□□□□□ -0.31
DDX54-202ENST00000314045 CDC123O75794 336 aaPredicted RBP13.11□□□□□ -0.31
DDX54-202ENST00000314045 VNN2O95498 520 aa13.11□□□□□ -0.31
DDX54-202ENST00000314045 PRG2P13727 222 aa13.11□□□□□ -0.31
DDX54-202ENST00000314045 ALOX12P18054 663 aa13.11□□□□□ -0.31
DDX54-202ENST00000314045 IGFALSP35858 605 aa13.11□□□□□ -0.31
DDX54-202ENST00000314045 LGALS3BPQ08380 585 aa13.11□□□□□ -0.31
DDX54-202ENST00000314045 MED22Q15528 200 aa13.11□□□□□ -0.31
DDX54-202ENST00000314045 VRK3Q8IV63 474 aa13.11□□□□□ -0.31
DDX54-202ENST00000314045 SLC34A3Q8N130 599 aa13.11□□□□□ -0.31
DDX54-202ENST00000314045 ZNF570Q96NI8 536 aa13.11□□□□□ -0.31
DDX54-202ENST00000314045 Q9N2J8 555 aa13.11□□□□□ -0.31
DDX54-202ENST00000314045 DMTF1Q9Y222 760 aa13.11□□□□□ -0.31
DDX54-202ENST00000314045 WBP11Q9Y2W2 641 aaKnown RBP13.11□□□□□ -0.31
DDX54-202ENST00000314045 DUX1O43812 170 aa13.11□□□□□ -0.31
DDX54-202ENST00000314045 PROS1P07225 676 aa13.11□□□□□ -0.31
DDX54-202ENST00000314045 KLK3P07288 261 aaPredicted RBP13.11□□□□□ -0.31
DDX54-202ENST00000314045 DRD2P14416 443 aa13.11□□□□□ -0.31
DDX54-202ENST00000314045 SDC1P18827 310 aa13.11□□□□□ -0.31
DDX54-202ENST00000314045 GPX3P22352 226 aa13.11□□□□□ -0.31
DDX54-202ENST00000314045 NUDT1P36639 197 aa13.11□□□□□ -0.31
DDX54-202ENST00000314045 TRAF3Q13114 568 aa13.11□□□□□ -0.31
DDX54-202ENST00000314045 FADDQ13158 208 aa13.11□□□□□ -0.31
DDX54-202ENST00000314045 SMU1Q2TAY7 513 aa13.11□□□□□ -0.31
DDX54-202ENST00000314045 PAGE3Q5JUK9 113 aa13.11□□□□□ -0.31
DDX54-202ENST00000314045 RBM44Q6ZP01 1051 aaKnown RBP13.11□□□□□ -0.31
DDX54-202ENST00000314045 FAM98AQ8NCA5 519 aaKnown RBP13.11□□□□□ -0.31
DDX54-202ENST00000314045 FGF14Q92915 247 aa13.11□□□□□ -0.31
DDX54-202ENST00000314045 RNFT2Q96EX2 444 aa13.11□□□□□ -0.31
DDX54-202ENST00000314045 OR6C2Q9NZP2 312 aa13.11□□□□□ -0.31
DDX54-202ENST00000314045 PCDHB3Q9Y5E6 796 aa13.11□□□□□ -0.31
DDX54-202ENST00000314045 LINC00854A0A1B0GVQ3 168 aa13.1□□□□□ -0.31
DDX54-202ENST00000314045 SCAMP2O15127 329 aaKnown RBP13.1□□□□□ -0.31
DDX54-202ENST00000314045 GTDC1Q4AE62 458 aa13.1□□□□□ -0.31
DDX54-202ENST00000314045 HENMT1Q5T8I9 393 aaKnown RBP13.1□□□□□ -0.31
DDX54-202ENST00000314045 FAM91A1Q658Y4 838 aa13.1□□□□□ -0.31
DDX54-202ENST00000314045 ZNF551Q7Z340 670 aaPredicted RBP13.1□□□□□ -0.31
DDX54-202ENST00000314045 C12orf40Q86WS4 652 aa13.1□□□□□ -0.31
DDX54-202ENST00000314045 ZNF683Q8IZ20 524 aa13.1□□□□□ -0.31
DDX54-202ENST00000314045 WDR36Q8NI36 951 aaKnown RBP13.1□□□□□ -0.31
DDX54-202ENST00000314045 INSM2Q96T92 566 aaPredicted RBP13.1□□□□□ -0.31
DDX54-202ENST00000314045 PHF7Q9BWX1 381 aaPredicted RBP13.1□□□□□ -0.31
DDX54-202ENST00000314045 OR8D2Q9GZM6 311 aa13.1□□□□□ -0.31
DDX54-202ENST00000314045 P2RY12Q9H244 342 aa13.1□□□□□ -0.31
DDX54-202ENST00000314045 UBE2ZQ9H832 354 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms