RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 ZUFSPQ96AP4 578 aa14.98□□□□□ -0.01
HCFC1-201ENST00000310441 KLHL33A6NCF5 533 aa14.98□□□□□ -0.01
HCFC1-201ENST00000310441 NPIPA2E9PIF3 369 aa14.98□□□□□ -0.01
HCFC1-201ENST00000310441 NPIPA3F8WFD2 350 aa14.98□□□□□ -0.01
HCFC1-201ENST00000310441 AURKAO14965 403 aa14.98□□□□□ -0.01
HCFC1-201ENST00000310441 GNRHRP30968 328 aa14.98□□□□□ -0.01
HCFC1-201ENST00000310441 SLC18A2Q05940 514 aa14.98□□□□□ -0.01
HCFC1-201ENST00000310441 RIN1Q13671 783 aa14.98□□□□□ -0.01
HCFC1-201ENST00000310441 LASP1Q14847 261 aaKnown RBP14.98□□□□□ -0.01
HCFC1-201ENST00000310441 BEST3Q8N1M1 668 aa14.98□□□□□ -0.01
HCFC1-201ENST00000310441 Q8N402 240 aa14.98□□□□□ -0.01
HCFC1-201ENST00000310441 GALNT11Q8NCW6 608 aa14.98□□□□□ -0.01
HCFC1-201ENST00000310441 TTYH2Q9BSA4 534 aa14.98□□□□□ -0.01
HCFC1-201ENST00000310441 F5H0A9 414 aaPredicted RBP14.98□□□□□ -0.01
HCFC1-201ENST00000310441 RGS6P49758 472 aa14.98□□□□□ -0.01
HCFC1-201ENST00000310441 GK3PQ14409 553 aa14.98□□□□□ -0.01
HCFC1-201ENST00000310441 OR4K3Q96R72 315 aa14.98□□□□□ -0.01
HCFC1-201ENST00000310441 RRAGCQ9HB90 399 aa14.98□□□□□ -0.01
HCFC1-201ENST00000310441 ERVK-19Q9WJR5 959 aa14.98□□□□□ -0.01
HCFC1-201ENST00000310441 GPR89AB7ZAQ6 455 aa14.98□□□□□ -0.01
HCFC1-201ENST00000310441 GPR89BP0CG08 455 aa14.98□□□□□ -0.01
HCFC1-201ENST00000310441 KCNJ5P48544 419 aa14.98□□□□□ -0.01
HCFC1-201ENST00000310441 LUMP51884 338 aaPredicted RBP14.98□□□□□ -0.01
HCFC1-201ENST00000310441 C6orf183Q5T699 404 aa14.98□□□□□ -0.01
HCFC1-201ENST00000310441 TMPPEQ6ZT21 453 aa14.98□□□□□ -0.01
HCFC1-201ENST00000310441 ZFAND2BQ8WV99 257 aa14.98□□□□□ -0.01
HCFC1-201ENST00000310441 PCED1BQ96HM7 432 aa14.98□□□□□ -0.01
HCFC1-201ENST00000310441 ACSL5Q9ULC5 683 aa14.98□□□□□ -0.01
HCFC1-201ENST00000310441 C2CD4BA6NLJ0 364 aa14.97□□□□□ -0.01
HCFC1-201ENST00000310441 A8MXE2 369 aa14.97□□□□□ -0.01
HCFC1-201ENST00000310441 KCT2Q8NC54 265 aa14.97□□□□□ -0.01
HCFC1-201ENST00000310441 NLGN2Q8NFZ4 835 aa14.97□□□□□ -0.01
HCFC1-201ENST00000310441 PTPN18Q99952 460 aa14.97□□□□□ -0.01
HCFC1-201ENST00000310441 PELOQ9BRX2 385 aaKnown RBP14.97□□□□□ -0.01
HCFC1-201ENST00000310441 KLHL21Q9UJP4 597 aa14.97□□□□□ -0.01
HCFC1-201ENST00000310441 FAM170BA6NMN3 283 aa14.97□□□□□ -0.01
HCFC1-201ENST00000310441 C1orf196B1AJZ1 125 aa14.97□□□□□ -0.01
HCFC1-201ENST00000310441 NT5C1B-RDH14C9J2C7 533 aa14.97□□□□□ -0.01
HCFC1-201ENST00000310441 ERI3O43414 337 aaKnown RBP14.97□□□□□ -0.01
HCFC1-201ENST00000310441 HCRTR2O43614 444 aa14.97□□□□□ -0.01
HCFC1-201ENST00000310441 GABARAPL2P60520 117 aa14.97□□□□□ -0.01
HCFC1-201ENST00000310441 MZT1Q08AG7 82 aa14.97□□□□□ -0.01
HCFC1-201ENST00000310441 ZNF763Q0D2J5 394 aa14.97□□□□□ -0.01
HCFC1-201ENST00000310441 GAS6Q14393 721 aa14.97□□□□□ -0.01
HCFC1-201ENST00000310441 PTPRRQ15256 657 aa14.97□□□□□ -0.01
HCFC1-201ENST00000310441 BTBD16Q32M84 506 aa14.97□□□□□ -0.01
HCFC1-201ENST00000310441 NADK2Q4G0N4 442 aa14.97□□□□□ -0.01
HCFC1-201ENST00000310441 ATAD3CQ5T2N8 411 aa14.97□□□□□ -0.01
HCFC1-201ENST00000310441 NOXRED1Q6NXP6 359 aa14.97□□□□□ -0.01
HCFC1-201ENST00000310441 MAPK15Q8TD08 544 aa14.97□□□□□ -0.01
HCFC1-201ENST00000310441 OR14A2Q96R54 314 aa14.97□□□□□ -0.01
HCFC1-201ENST00000310441 FCRL5Q96RD9 977 aa14.97□□□□□ -0.01
HCFC1-201ENST00000310441 TMEM100Q9NV29 134 aa14.97□□□□□ -0.01
HCFC1-201ENST00000310441 TAS2R31P59538 309 aa14.97□□□□□ -0.01
HCFC1-201ENST00000310441 DACT2Q5SW24 774 aa14.97□□□□□ -0.01
HCFC1-201ENST00000310441 FAM189A1O60320 539 aa14.97□□□□□ -0.01
HCFC1-201ENST00000310441 EARS2Q5JPH6 523 aaKnown RBP14.97□□□□□ -0.01
HCFC1-201ENST00000310441 C10orf82Q8WW14 230 aa14.97□□□□□ -0.01
HCFC1-201ENST00000310441 TMEM203Q969S6 136 aa14.97□□□□□ -0.01
HCFC1-201ENST00000310441 HSH2DQ96JZ2 352 aa14.97□□□□□ -0.01
HCFC1-201ENST00000310441 SNX27Q96L92 541 aa14.97□□□□□ -0.01
HCFC1-201ENST00000310441 DERL2Q9GZP9 239 aa14.97□□□□□ -0.01
HCFC1-201ENST00000310441 TMEM185BQ9H7F4 350 aa14.97□□□□□ -0.01
HCFC1-201ENST00000310441 TPRP12270 2363 aaKnown RBP14.97□□□□□ -0.01
HCFC1-201ENST00000310441 TCEA1P23193 301 aaKnown RBP14.97□□□□□ -0.01
HCFC1-201ENST00000310441 CTHP32929 405 aa14.97□□□□□ -0.01
HCFC1-201ENST00000310441 CDKN2CP42773 168 aa14.97□□□□□ -0.01
HCFC1-201ENST00000310441 ATP4BP51164 291 aa14.97□□□□□ -0.01
HCFC1-201ENST00000310441 ANKRD22Q5VYY1 191 aa14.97□□□□□ -0.01
HCFC1-201ENST00000310441 CD84Q9UIB8 345 aa14.97□□□□□ -0.01
HCFC1-201ENST00000310441 TLX2O43763 284 aaPredicted RBP14.97□□□□□ -0.01
HCFC1-201ENST00000310441 ADH1BP00325 375 aa14.97□□□□□ -0.01
HCFC1-201ENST00000310441 RPS3P23396 243 aaKnown RBP eCLIP14.97□□□□□ -0.012e-8■■■□□ 15.4
HCFC1-201ENST00000310441 GJA9P57773 515 aa14.97□□□□□ -0.01
HCFC1-201ENST00000310441 RRAS2P62070 204 aaPredicted RBP14.97□□□□□ -0.01
HCFC1-201ENST00000310441 SLC27A4Q6P1M0 643 aa14.97□□□□□ -0.01
HCFC1-201ENST00000310441 GDPD4Q6W3E5 623 aa14.97□□□□□ -0.01
HCFC1-201ENST00000310441 VTCN1Q7Z7D3 282 aa14.97□□□□□ -0.01
HCFC1-201ENST00000310441 PDZD9Q8IXQ8 264 aa14.97□□□□□ -0.01
HCFC1-201ENST00000310441 SYNPOQ8N3V7 929 aa14.97□□□□□ -0.01
HCFC1-201ENST00000310441 ASCC1Q8N9N2 400 aaKnown RBP14.97□□□□□ -0.01
HCFC1-201ENST00000310441 ABHD5Q8WTS1 349 aa14.97□□□□□ -0.01
HCFC1-201ENST00000310441 NANSQ9NR45 359 aa14.97□□□□□ -0.01
HCFC1-201ENST00000310441 LIPT1Q9Y234 373 aa14.97□□□□□ -0.01
HCFC1-201ENST00000310441 KIAA0100Q14667 2235 aaKnown RBP14.97□□□□□ -0.01
HCFC1-201ENST00000310441 PAK4O96013 591 aaPredicted RBP14.97□□□□□ -0.01
HCFC1-201ENST00000310441 C4BPAP04003 597 aaKnown RBP14.97□□□□□ -0.01
HCFC1-201ENST00000310441 LILRA4P59901 499 aa14.97□□□□□ -0.01
HCFC1-201ENST00000310441 FAM198BQ6UWH4 519 aa14.97□□□□□ -0.01
HCFC1-201ENST00000310441 ABHD15Q6UXT9 468 aa14.97□□□□□ -0.01
HCFC1-201ENST00000310441 ZNF440Q8IYI8 595 aa14.97□□□□□ -0.01
HCFC1-201ENST00000310441 PIAS4Q8N2W9 510 aaPredicted RBP14.97□□□□□ -0.01
HCFC1-201ENST00000310441 OR6N1Q8NGY5 312 aa14.97□□□□□ -0.01
HCFC1-201ENST00000310441 TRIB2Q92519 343 aa14.97□□□□□ -0.01
HCFC1-201ENST00000310441 IL25Q9H293 177 aa14.97□□□□□ -0.01
HCFC1-201ENST00000310441 ATP1B2P14415 290 aaPredicted RBP14.96□□□□□ -0.01
HCFC1-201ENST00000310441 UQCRC2P22695 453 aa14.96□□□□□ -0.01
HCFC1-201ENST00000310441 RBM23Q86U06 439 aaKnown RBP14.96□□□□□ -0.01
HCFC1-201ENST00000310441 NPAS3Q8IXF0 933 aa14.96□□□□□ -0.01
HCFC1-201ENST00000310441 GPR152Q8TDT2 470 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms