RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 RXRGP48443 463 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 STK19P49842 368 aaPredicted RBP4.72□□□□□ -1.65
CKS1B-201ENST00000308987 HLCSP50747 726 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 ADPRHP54922 357 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 TMBIM6P55061 237 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 WNT3AP56704 352 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 NXPH1P58417 271 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 HHEXQ03014 270 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 COL10A1Q03692 680 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 EPS8Q12929 822 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 CSHL1Q14406 222 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 GK3PQ14409 553 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 POU6F1Q14863 301 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 CYTH1Q15438 398 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 CST6Q15828 149 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 MOGQ16653 247 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 NRF1Q16656 503 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 SMU1Q2TAY7 513 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 HNRNPA1L2Q32P51 320 aaKnown RBP4.72□□□□□ -1.65
CKS1B-201ENST00000308987 ZNF829Q3KNS6 432 aaPredicted RBP4.72□□□□□ -1.65
CKS1B-201ENST00000308987 MPPE1Q53F39 396 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 UNC50Q53HI1 259 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 KANK2Q63ZY3 851 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 ZNF776Q68DI1 518 aaPredicted RBP4.72□□□□□ -1.65
CKS1B-201ENST00000308987 MRNIPQ6NTE8 343 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 MSANTD2Q6P1R3 559 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 TTC33Q6PID6 262 aaPredicted RBP4.72□□□□□ -1.65
CKS1B-201ENST00000308987 CYHR1Q6ZMK1 362 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 NEK10Q6ZWH5 1172 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 USP30Q70CQ3 517 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 ZNF554Q86TJ5 538 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 ISCA2Q86U28 154 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 TAC4Q86UU9 113 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 PHYKPLQ8IUZ5 450 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 MMAAQ8IVH4 418 aaKnown RBP4.72□□□□□ -1.65
CKS1B-201ENST00000308987 FUNDC1Q8IVP5 155 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 SLC15A3Q8IY34 581 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 ADGRG5Q8IZF4 528 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 APCDD1Q8J025 514 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 STK40Q8N2I9 435 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 SLC25A45Q8N413 288 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 DHRSXQ8N5I4 330 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 DPP10Q8N608 796 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 TEX26Q8N6G2 289 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 RNF148Q8N7C7 305 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 RTL3Q8N8U3 475 aaKnown RBP4.72□□□□□ -1.65
CKS1B-201ENST00000308987 DCBLD1Q8N8Z6 715 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 FAM47BQ8NA70 645 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 SMYD1Q8NB12 490 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 IPMKQ8NFU5 416 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 SPATA22Q8NHS9 363 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 WFIKKN2Q8TEU8 576 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 CANT1Q8WVQ1 401 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 FAM131CQ96AQ9 280 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 PPWD1Q96BP3 646 aaKnown RBP4.72□□□□□ -1.65
CKS1B-201ENST00000308987 ISOC1Q96CN7 298 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 NXPE2Q96DL1 559 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 CLIP3Q96DZ5 547 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 MAGED4Q96JG8 741 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 OLFM1Q99784 485 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 CIB1Q99828 191 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 APOL2Q9BQE5 337 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 BCL7BQ9BQE9 202 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 ADI1Q9BV57 179 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 TDRD1Q9BXT4 1180 aaKnown RBP4.72□□□□□ -1.65
CKS1B-201ENST00000308987 CD244Q9BZW8 370 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 BRINP2Q9C0B6 783 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 SLC39A8Q9C0K1 460 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 PCDHAC1Q9H158 963 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 CCDC68Q9H2F9 335 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 NOL11Q9H8H0 719 aaKnown RBP4.72□□□□□ -1.65
CKS1B-201ENST00000308987 CPNE5Q9HCH3 593 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 SYTL2Q9HCH5 934 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 SLC52A3Q9NQ40 469 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 TBC1D23Q9NUY8 699 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 RIC8BQ9NVN3 520 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 INTS10Q9NVR2 710 aaKnown RBP4.72□□□□□ -1.65
CKS1B-201ENST00000308987 SMOXQ9NWM0 555 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 IRAK4Q9NWZ3 460 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 GIN1Q9NXP7 522 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 PKD2L2Q9NZM6 624 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 ZIM2Q9NZV7 527 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 CCDC167Q9P0B6 97 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 ITGB1BP2Q9UKP3 347 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 PACSIN3Q9UKS6 424 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 PCDHGB4Q9UN71 923 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 FAF1Q9UNN5 650 aaPredicted RBP4.72□□□□□ -1.65
CKS1B-201ENST00000308987 B3GNT3Q9Y2A9 372 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 AP3M1Q9Y2T2 418 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 PCDHGB5Q9Y5G0 923 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 PCDHA9Q9Y5H5 950 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 U3KQA8 63 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 CSMD1Q96PZ7 3565 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 MYO9AB2RTY4 2548 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 A0A0J9YYE9 177 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 RNF103-CHMP3A0A140T963 221 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 LOC285095A0A1B0GVY8 99 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 CCDC78A2IDD5 438 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 C16orf96A6NNT2 1141 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 ZNF839A8K0R7 811 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms