RNA–Protein interactions for RNA: ENST00000308271.13

USP48-201, Transcript of ubiquitin specific peptidase 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP48, Length 4,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-201ENST00000308271 DEDD2Q8WXF8 326 aa18.61■□□□□ 0.57
USP48-201ENST00000308271 OR51E2Q9H255 320 aa18.61■□□□□ 0.57
USP48-201ENST00000308271 OR51B5Q9H339 312 aa18.61■□□□□ 0.57
USP48-201ENST00000308271 TCF7L1Q9HCS4 588 aa18.61■□□□□ 0.57
USP48-201ENST00000308271 UBQLN2Q9UHD9 624 aa18.61■□□□□ 0.57
USP48-201ENST00000308271 DLGAP4Q9Y2H0 992 aa18.61■□□□□ 0.57
USP48-201ENST00000308271 TRPM3Q9HCF6 1732 aaPredicted RBP18.6■□□□□ 0.57
USP48-201ENST00000308271 FAM155AB1AL88 458 aaPredicted RBP18.6■□□□□ 0.57
USP48-201ENST00000308271 WWP2O00308 870 aa18.6■□□□□ 0.57
USP48-201ENST00000308271 SLC16A5O15375 505 aa18.6■□□□□ 0.57
USP48-201ENST00000308271 INHBEP58166 350 aa18.6■□□□□ 0.57
USP48-201ENST00000308271 FKBP1BP68106 108 aa18.6■□□□□ 0.57
USP48-201ENST00000308271 ADARB1P78563 741 aaKnown RBP18.6■□□□□ 0.57
USP48-201ENST00000308271 PRKCDQ05655 676 aa18.6■□□□□ 0.57
USP48-201ENST00000308271 MAMDC4Q6UXC1 1216 aa18.6■□□□□ 0.57
USP48-201ENST00000308271 SAMD14Q8IZD0 417 aaPredicted RBP18.6■□□□□ 0.57
USP48-201ENST00000308271 ASB15Q8WXK1 588 aa18.6■□□□□ 0.57
USP48-201ENST00000308271 MSANTD3Q96H12 275 aa18.6■□□□□ 0.57
USP48-201ENST00000308271 UHRF1Q96T88 793 aaPredicted RBP18.6■□□□□ 0.57
USP48-201ENST00000308271 TTLL2Q9BWV7 592 aa18.6■□□□□ 0.57
USP48-201ENST00000308271 FBXW2Q9UKT8 454 aa18.6■□□□□ 0.57
USP48-201ENST00000308271 HMX3A6NHT5 357 aa18.6■□□□□ 0.57
USP48-201ENST00000308271 PRAMEF14Q5SWL7 426 aa18.6■□□□□ 0.57
USP48-201ENST00000308271 GPRC6AQ5T6X5 926 aa18.6■□□□□ 0.57
USP48-201ENST00000308271 PRAMEF13Q5VWM6 474 aa18.6■□□□□ 0.57
USP48-201ENST00000308271 CD200R1Q8TD46 325 aa18.6■□□□□ 0.57
USP48-201ENST00000308271 CXorf40BQ96DE9 158 aa18.6■□□□□ 0.57
USP48-201ENST00000308271 ZSCAN5AQ9BUG6 496 aa18.6■□□□□ 0.57
USP48-201ENST00000308271 CKLFQ9UBR5 152 aa18.6■□□□□ 0.57
USP48-201ENST00000308271 NUFIP1Q9UHK0 495 aaKnown RBP18.6■□□□□ 0.57
USP48-201ENST00000308271 SARDHQ9UL12 918 aa18.6■□□□□ 0.57
USP48-201ENST00000308271 ADAP00813 363 aa18.6■□□□□ 0.57
USP48-201ENST00000308271 PRNPP04156 253 aa18.6■□□□□ 0.57
USP48-201ENST00000308271 PRSS56P0CW18 603 aa18.6■□□□□ 0.57
USP48-201ENST00000308271 TIA1P31483 386 aaKnown RBP eCLIP18.6■□□□□ 0.573e-8■■■■□ 24.9
USP48-201ENST00000308271 GGT2P36268 569 aa18.6■□□□□ 0.57
USP48-201ENST00000308271 PARP16Q8N5Y8 322 aa18.6■□□□□ 0.57
USP48-201ENST00000308271 RERGQ96A58 199 aaPredicted RBP18.6■□□□□ 0.57
USP48-201ENST00000308271 NELL2Q99435 816 aa18.6■□□□□ 0.57
USP48-201ENST00000308271 EPYCQ99645 322 aa18.6■□□□□ 0.57
USP48-201ENST00000308271 BRD7Q9NPI1 651 aa18.6■□□□□ 0.57
USP48-201ENST00000308271 CD93Q9NPY3 652 aa18.6■□□□□ 0.57
USP48-201ENST00000308271 IL37Q9NZH6 218 aa18.6■□□□□ 0.57
USP48-201ENST00000308271 AOC2O75106 756 aa18.59■□□□□ 0.57
USP48-201ENST00000308271 GPR32O75388 356 aa18.59■□□□□ 0.57
USP48-201ENST00000308271 CDK1P06493 297 aa18.59■□□□□ 0.57
USP48-201ENST00000308271 SLC9A5Q14940 896 aa18.59■□□□□ 0.57
USP48-201ENST00000308271 UGT8Q16880 541 aa18.59■□□□□ 0.57
USP48-201ENST00000308271 LRRC73Q5JTD7 316 aa18.59■□□□□ 0.57
USP48-201ENST00000308271 PRSS55Q6UWB4 352 aaPredicted RBP18.59■□□□□ 0.57
USP48-201ENST00000308271 SERPINA11Q86U17 422 aa18.59■□□□□ 0.57
USP48-201ENST00000308271 ZMIZ2Q8NF64 920 aa18.59■□□□□ 0.57
USP48-201ENST00000308271 CEP76Q8TAP6 659 aa18.59■□□□□ 0.57
USP48-201ENST00000308271 PTPN18Q99952 460 aa18.59■□□□□ 0.57
USP48-201ENST00000308271 TBC1D24Q9ULP9 559 aa18.59■□□□□ 0.57
USP48-201ENST00000308271 PRKYO43930 277 aa18.59■□□□□ 0.57
USP48-201ENST00000308271 CH25HO95992 272 aa18.59■□□□□ 0.57
USP48-201ENST00000308271 UQCRC2P22695 453 aa18.59■□□□□ 0.57
USP48-201ENST00000308271 CYP27C1Q4G0S4 372 aa18.59■□□□□ 0.57
USP48-201ENST00000308271 PRPF38BQ5VTL8 546 aaKnown RBP18.59■□□□□ 0.57
USP48-201ENST00000308271 SLC27A4Q6P1M0 643 aa18.59■□□□□ 0.57
USP48-201ENST00000308271 HSDL2Q6YN16 418 aa18.59■□□□□ 0.57
USP48-201ENST00000308271 KRT77Q7Z794 578 aa18.59■□□□□ 0.57
USP48-201ENST00000308271 IQCHQ86VS3 1027 aa18.59■□□□□ 0.57
USP48-201ENST00000308271 TIGD4Q8IY51 512 aa18.59■□□□□ 0.57
USP48-201ENST00000308271 ABCG5Q9H222 651 aa18.59■□□□□ 0.57
USP48-201ENST00000308271 ELAC1Q9H777 363 aaKnown RBP18.59■□□□□ 0.57
USP48-201ENST00000308271 NLKQ9UBE8 527 aa18.59■□□□□ 0.57
USP48-201ENST00000308271 GPSM3Q9Y4H4 160 aa18.59■□□□□ 0.57
USP48-201ENST00000308271 CRYZL1O95825 349 aa18.59■□□□□ 0.57
USP48-201ENST00000308271 IFNA6P05013 189 aa18.59■□□□□ 0.57
USP48-201ENST00000308271 HMGCLP35914 325 aa18.59■□□□□ 0.57
USP48-201ENST00000308271 GPR17Q13304 367 aa18.59■□□□□ 0.57
USP48-201ENST00000308271 RGMAQ96B86 450 aa18.59■□□□□ 0.57
USP48-201ENST00000308271 WRAP53Q9BUR4 548 aaKnown RBP18.59■□□□□ 0.57
USP48-201ENST00000308271 GBAP04062 536 aa18.59■□□□□ 0.57
USP48-201ENST00000308271 CSNK2A2P19784 350 aaPredicted RBP18.59■□□□□ 0.57
USP48-201ENST00000308271 DNASE1P24855 282 aa18.59■□□□□ 0.57
USP48-201ENST00000308271 TAS2R43P59537 309 aa18.59■□□□□ 0.57
USP48-201ENST00000308271 GARNL3Q5VVW2 1013 aa18.59■□□□□ 0.57
USP48-201ENST00000308271 JAZF1Q86VZ6 243 aa18.59■□□□□ 0.57
USP48-201ENST00000308271 GHDCQ8N2G8 530 aa18.59■□□□□ 0.57
USP48-201ENST00000308271 METTL4Q8N3J2 472 aa18.59■□□□□ 0.57
USP48-201ENST00000308271 GTF2H4Q92759 462 aa18.59■□□□□ 0.57
USP48-201ENST00000308271 OSTF1Q92882 214 aa18.59■□□□□ 0.57
USP48-201ENST00000308271 INPP5KQ9BT40 448 aa18.59■□□□□ 0.57
USP48-201ENST00000308271 A0A1W2PQL4 384 aaPredicted RBP18.58■□□□□ 0.57
USP48-201ENST00000308271 SOCS5O75159 536 aa18.58■□□□□ 0.57
USP48-201ENST00000308271 ADH1AP07327 375 aa18.58■□□□□ 0.57
USP48-201ENST00000308271 ACRV1P26436 265 aa18.58■□□□□ 0.57
USP48-201ENST00000308271 HSD17B2P37059 387 aa18.58■□□□□ 0.57
USP48-201ENST00000308271 METTL2BQ6P1Q9 378 aaKnown RBP18.58■□□□□ 0.57
USP48-201ENST00000308271 TMIGD1Q6UXZ0 262 aa18.58■□□□□ 0.57
USP48-201ENST00000308271 TMC8Q8IU68 726 aa18.58■□□□□ 0.57
USP48-201ENST00000308271 SAMD12Q8N8I0 201 aa18.58■□□□□ 0.57
USP48-201ENST00000308271 GALNT6Q8NCL4 622 aa18.58■□□□□ 0.57
USP48-201ENST00000308271 PSD4Q8NDX1 1056 aa18.58■□□□□ 0.57
USP48-201ENST00000308271 ANKRD36CQ5JPF3 1778 aa18.58■□□□□ 0.57
USP48-201ENST00000308271 ANXA2P2A6NMY6 339 aa18.58■□□□□ 0.56
USP48-201ENST00000308271 ANXA2P07355 339 aaKnown RBP18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms