RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 OLR1P78380 273 aa10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 ATP1A4Q13733 1029 aa10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 AP5B1Q2VPB7 878 aa10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 ADPRMQ3LIE5 342 aa10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 KHDRBS2Q5VWX1 349 aaKnown RBP10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 LETMD1Q6P1Q0 360 aa10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 FRMD7Q6ZUT3 714 aa10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 MRGPREQ86SM8 312 aa10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 C10orf107Q8IVU9 208 aa10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 GOLGA6L1Q8N7Z2 621 aa10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 CDYL2Q8N8U2 506 aa10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 OR5T3Q8NGG3 340 aa10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 PPP1R14CQ8TAE6 165 aa10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 WDR20Q8TBZ3 569 aa10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 ADAMTS17Q8TE56 1095 aa10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 ADAMTS18Q8TE60 1221 aa10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 APOBEC4Q8WW27 367 aaKnown RBP10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 SELENOMQ8WWX9 145 aa10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 METTL21AQ8WXB1 218 aa10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 RGMAQ96B86 450 aa10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 NACC2Q96BF6 587 aa10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 ZBTB9Q96C00 473 aa10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 MTFMTQ96DP5 389 aaKnown RBP10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 FER1L6-AS2Q96M78 137 aa10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 F2RL3Q96RI0 385 aa10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 UBL7Q96S82 380 aaPredicted RBP10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 SERINC2Q96SA4 455 aa10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 SERPINI1Q99574 410 aa10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 TBCDQ9BTW9 1192 aa10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 NPLQ9BXD5 320 aaPredicted RBP10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 SLC29A3Q9BZD2 475 aa10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 OR51B5Q9H339 312 aa10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 GSTO2Q9H4Y5 243 aa10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 MID1IP1Q9NPA3 183 aa10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 ACSS2Q9NR19 701 aa10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 C19orf25Q9UFG5 118 aaPredicted RBP10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 MKL2Q9ULH7 1088 aa10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 G3BP2Q9UN86 482 aaKnown RBP10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 MRPS33Q9Y291 106 aaKnown RBP10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 SPACA6W5XKT8 324 aa10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 USP24Q9UPU5 2620 aa10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 ARGFXA6NJG6 315 aa10.39□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 C4orf51C9J302 202 aa10.39□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 AGPSO00116 658 aa10.39□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 FOXE1O00358 373 aaPredicted RBP10.39□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 SAP18O00422 153 aaKnown RBP10.39□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 CHST10O43529 356 aa10.39□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 TYROBPO43914 113 aa10.39□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 CDC123O75794 336 aaPredicted RBP10.39□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 ZWINTO95229 277 aa10.39□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 BMP10O95393 424 aa10.39□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 FHP07954 510 aa10.39□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 CYC1P08574 325 aa10.39□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 SMIM10L1P0DMW3 83 aa10.39□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 NEFHP12036 1026 aa10.39□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 ACPPP15309 386 aa10.39□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 CREB1P16220 341 aa10.39□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 CERS1P27544 350 aa10.39□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 ALDH3A1P30838 453 aa10.39□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 TSFMP43897 325 aaKnown RBP10.39□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 RAB38P57729 211 aa10.39□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 FOXL2P58012 376 aa10.39□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 SNRPNP63162 240 aaKnown RBP10.39□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 TBR1Q16650 682 aa10.39□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 TUBB8Q3ZCM7 444 aa10.39□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 SGO1Q5FBB7 561 aa10.39□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 DEPDC1Q5TB30 811 aa10.39□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 ABHD17CQ6PCB6 329 aa10.39□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 MED25Q71SY5 747 aa10.39□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 HDXQ7Z353 690 aa10.39□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 EXOC3L1Q86VI1 746 aa10.39□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 RNF175Q8N4F7 328 aa10.39□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 TMEM102Q8N9M5 508 aaPredicted RBP10.39□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 CLEC1AQ8NC01 280 aa10.39□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 METTL6Q8TCB7 284 aa10.39□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 AGAP11Q8TF27 550 aa10.39□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 TBC1D20Q96BZ9 403 aa10.39□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 SMIM10Q96HG1 83 aa10.39□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 MECRQ9BV79 373 aa10.39□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 AICDAQ9GZX7 198 aa10.39□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 NMRK1Q9NWW6 199 aa10.39□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 PPT2Q9UMR5 302 aa10.39□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 ZFHX4Q86UP3 3567 aa10.38□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 MED13Q9UHV7 2174 aa10.38□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 DMXL2Q8TDJ6 3036 aa10.38□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 ARHGAP10A1A4S6 786 aa10.38□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 PPP6CO00743 305 aa10.38□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 PLPP1O14494 284 aa10.38□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 ALOX12BO75342 701 aa10.38□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 ESRRBO95718 433 aa10.38□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 C8orf89P0DMQ9 161 aa10.38□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 H2AFXP16104 143 aaPredicted RBP10.38□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 HIST1H1TP22492 207 aaPredicted RBP10.38□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 NEK2P51955 445 aa10.38□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 ARFIP1P53367 373 aa10.38□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 POLE2P56282 527 aa10.38□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 CSTF3Q12996 717 aaKnown RBP10.38□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 CUL3Q13618 768 aa10.38□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 IMPG1Q17R60 797 aa10.38□□□□□ -0.75
CSPG4P2Y-201ENST00000306853 IRAK1BP1Q5VVH5 260 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms