RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 CENPMQ9NSP4 180 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 GPR34Q9UPC5 381 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 CAPN8A6NHC0 703 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 STC1P52823 247 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 PSPHP78330 225 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 FRG2Q64ET8 278 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 NOXRED1Q6NXP6 359 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 ZNF627Q7L945 461 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 LIX1LQ8IVB5 337 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 SPATA22Q8NHS9 363 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 FRG2BQ96QU4 278 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 CWH43Q9H720 699 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 DKK3Q9UBP4 350 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 EIF3KQ9UBQ5 218 aaKnown RBP8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 TMEM59LQ9UK28 342 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 DAPL1A0PJW8 107 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 GJE1A6NN92 205 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 RTCAO00442 366 aaKnown RBP8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 JUNDP17535 347 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 TSPAN8P19075 237 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 ABCG1P45844 678 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 AFF3P51826 1226 aaKnown RBP8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 AP2S1P53680 142 aaPredicted RBP8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 E2F1Q01094 437 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 CREB5Q02930 508 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 LRRC26Q2I0M4 334 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 RNASE12Q5GAN4 147 aaKnown RBP8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 TMIGD1Q6UXZ0 262 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 BEND4Q6ZU67 534 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 C6orf120Q7Z4R8 191 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 CILP2Q8IUL8 1156 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 CBARPQ8N350 705 aaPredicted RBP8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 FAM86B1Q8N7N1 296 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 ELMO3Q96BJ8 720 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 GPR174Q9BXC1 333 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 GPRC5BQ9NZH0 403 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 FTSJ1Q9UET6 329 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 ATP6AP2A0A1C7CYW4 349 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 CXCL10P02778 98 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 CCNOP22674 350 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 CD6P30203 668 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 PIM3Q86V86 326 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 RAB43Q86YS6 212 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 MINDY2Q8NBR6 621 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 NAT14Q8WUY8 206 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 SLC5A11Q8WWX8 675 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 SCRN2Q96FV2 425 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 SLC5A7Q9GZV3 580 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 LMAN1LQ9HAT1 526 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 OR2AT4A6NND4 320 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 MAGEB17A8MXT2 336 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 FTCDNL1E5RQL4 147 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 CYB5BO43169 146 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 ACTL6BO94805 426 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 HCKP08631 526 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 MPC1LP0DKB6 136 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 EN2P19622 333 aaPredicted RBP8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 NFATC2Q13469 925 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 MAD2L1BPQ15013 274 aaPredicted RBP8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 ANKRD54Q6NXT1 300 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 LINGO2Q7L985 606 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 AKAP14Q86UN6 197 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 OR2L2Q8NH16 312 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 NCSTNQ92542 709 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 MR1Q95460 341 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 G6PC3Q9BUM1 346 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 FN3KQ9H479 309 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 CD248Q9HCU0 757 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 HEATR5BQ9P2D3 2071 aa8.04□□□□□ -1.12
PCDHB1-201ENST00000306549 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.04□□□□□ -1.12
PCDHB1-201ENST00000306549 CIB4A0PJX0 185 aa8.04□□□□□ -1.12
PCDHB1-201ENST00000306549 LINC01553A4QN01 128 aa8.04□□□□□ -1.12
PCDHB1-201ENST00000306549 WASH4PA8MWX3 477 aa8.04□□□□□ -1.12
PCDHB1-201ENST00000306549 ECI2O75521 394 aa8.04□□□□□ -1.12
PCDHB1-201ENST00000306549 RFPL2O75678 378 aa8.04□□□□□ -1.12
PCDHB1-201ENST00000306549 ANXA3P12429 323 aa8.04□□□□□ -1.12
PCDHB1-201ENST00000306549 ICAM2P13598 275 aa8.04□□□□□ -1.12
PCDHB1-201ENST00000306549 ADRB3P13945 408 aa8.04□□□□□ -1.12
PCDHB1-201ENST00000306549 S100A7P31151 101 aa8.04□□□□□ -1.12
PCDHB1-201ENST00000306549 HMGCLP35914 325 aa8.04□□□□□ -1.12
PCDHB1-201ENST00000306549 MAGEA12P43365 314 aa8.04□□□□□ -1.12
PCDHB1-201ENST00000306549 RAB28P51157 221 aa8.04□□□□□ -1.12
PCDHB1-201ENST00000306549 GRIK2Q13002 908 aa8.04□□□□□ -1.12
PCDHB1-201ENST00000306549 CHRNA6Q15825 494 aa8.04□□□□□ -1.12
PCDHB1-201ENST00000306549 SYT16Q17RD7 645 aa8.04□□□□□ -1.12
PCDHB1-201ENST00000306549 ZNF598Q86UK7 904 aaKnown RBP8.04□□□□□ -1.12
PCDHB1-201ENST00000306549 TXNDC5Q8NBS9 432 aaKnown RBP8.04□□□□□ -1.12
PCDHB1-201ENST00000306549 PLEKHA6Q9Y2H5 1048 aa8.04□□□□□ -1.12
PCDHB1-201ENST00000306549 CLPXO76031 633 aa8.04□□□□□ -1.12
PCDHB1-201ENST00000306549 AHSA1O95433 338 aa8.04□□□□□ -1.12
PCDHB1-201ENST00000306549 HNRNPLP14866 589 aaKnown RBP eCLIP8.04□□□□□ -1.12
PCDHB1-201ENST00000306549 HOXD13P35453 343 aa8.04□□□□□ -1.12
PCDHB1-201ENST00000306549 PLA2G16P53816 162 aa8.04□□□□□ -1.12
PCDHB1-201ENST00000306549 DSC1Q08554 894 aa8.04□□□□□ -1.12
PCDHB1-201ENST00000306549 EFR3AQ14156 821 aa8.04□□□□□ -1.12
PCDHB1-201ENST00000306549 GRM7Q14831 915 aa8.04□□□□□ -1.12
PCDHB1-201ENST00000306549 IFI44LQ53G44 452 aa8.04□□□□□ -1.12
PCDHB1-201ENST00000306549 GPR149Q86SP6 731 aa8.04□□□□□ -1.12
PCDHB1-201ENST00000306549 PNPT1Q8TCS8 783 aaKnown RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms