RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 A0A1W2PRQ8 180 aa15.36■□□□□ 0.05
USP42-201ENST00000306177 KLHL33A6NCF5 533 aa15.36■□□□□ 0.05
USP42-201ENST00000306177 CD9P21926 228 aa15.36■□□□□ 0.05
USP42-201ENST00000306177 GLDCP23378 1020 aa15.36■□□□□ 0.05
USP42-201ENST00000306177 ITGA3P26006 1051 aa15.36■□□□□ 0.05
USP42-201ENST00000306177 HTR1EP28566 365 aa15.36■□□□□ 0.05
USP42-201ENST00000306177 CD47Q08722 323 aa15.36■□□□□ 0.05
USP42-201ENST00000306177 RAB33AQ14088 237 aa15.36■□□□□ 0.05
USP42-201ENST00000306177 DHCR24Q15392 516 aa15.36■□□□□ 0.05
USP42-201ENST00000306177 OR4K17Q8NGC6 315 aa15.36■□□□□ 0.05
USP42-201ENST00000306177 TMEM80Q96HE8 168 aa15.36■□□□□ 0.05
USP42-201ENST00000306177 ZNF778Q96MU6 729 aa15.36■□□□□ 0.05
USP42-201ENST00000306177 PFDN2Q9UHV9 154 aa15.36■□□□□ 0.05
USP42-201ENST00000306177 NPIPA5E9PKD4 350 aa15.36■□□□□ 0.05
USP42-201ENST00000306177 EEDO75530 441 aaKnown RBP15.36■□□□□ 0.05
USP42-201ENST00000306177 MTRF1O75570 445 aaKnown RBP15.36■□□□□ 0.05
USP42-201ENST00000306177 ARL6IP5O75915 188 aa15.36■□□□□ 0.05
USP42-201ENST00000306177 EDN1P05305 212 aa15.36■□□□□ 0.05
USP42-201ENST00000306177 SLC2A2P11168 524 aaPredicted RBP15.36■□□□□ 0.05
USP42-201ENST00000306177 SUOXP51687 545 aa15.36■□□□□ 0.05
USP42-201ENST00000306177 PDX1P52945 283 aa15.36■□□□□ 0.05
USP42-201ENST00000306177 SCRN3Q0VDG4 424 aa15.36■□□□□ 0.05
USP42-201ENST00000306177 GRIK2Q13002 908 aa15.36■□□□□ 0.05
USP42-201ENST00000306177 FADDQ13158 208 aa15.36■□□□□ 0.05
USP42-201ENST00000306177 ELOCQ15369 112 aa15.36■□□□□ 0.05
USP42-201ENST00000306177 TPRG1LQ5T0D9 272 aa15.36■□□□□ 0.05
USP42-201ENST00000306177 ZNF773Q6PK81 442 aa15.36■□□□□ 0.05
USP42-201ENST00000306177 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.36■□□□□ 0.05
USP42-201ENST00000306177 TTC9BQ8N6N2 239 aa15.36■□□□□ 0.05
USP42-201ENST00000306177 OSTF1Q92882 214 aa15.36■□□□□ 0.05
USP42-201ENST00000306177 BADQ92934 168 aa15.36■□□□□ 0.05
USP42-201ENST00000306177 SLC22A4Q9H015 551 aa15.36■□□□□ 0.05
USP42-201ENST00000306177 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.36■□□□□ 0.05
USP42-201ENST00000306177 C19orf25Q9UFG5 118 aaPredicted RBP15.36■□□□□ 0.05
USP42-201ENST00000306177 SLCO3A1Q9UIG8 710 aa15.36■□□□□ 0.05
USP42-201ENST00000306177 NPIPA1Q9UND3 350 aa15.36■□□□□ 0.05
USP42-201ENST00000306177 PCDHB3Q9Y5E6 796 aa15.36■□□□□ 0.05
USP42-201ENST00000306177 HEPACAM2A8MVW5 462 aa15.35■□□□□ 0.05
USP42-201ENST00000306177 K7ERQ8 282 aa15.35■□□□□ 0.05
USP42-201ENST00000306177 ABCB7O75027 752 aa15.35■□□□□ 0.05
USP42-201ENST00000306177 RAB36O95755 333 aa15.35■□□□□ 0.05
USP42-201ENST00000306177 ASGR2P07307 311 aa15.35■□□□□ 0.05
USP42-201ENST00000306177 IL3P08700 152 aa15.35■□□□□ 0.05
USP42-201ENST00000306177 SLC6A6P31641 620 aa15.35■□□□□ 0.05
USP42-201ENST00000306177 GRIA2P42262 883 aa15.35■□□□□ 0.05
USP42-201ENST00000306177 TBPL1P62380 186 aa15.35■□□□□ 0.05
USP42-201ENST00000306177 SLC36A4Q6YBV0 504 aa15.35■□□□□ 0.05
USP42-201ENST00000306177 APCDD1Q8J025 514 aa15.35■□□□□ 0.05
USP42-201ENST00000306177 YIPF7Q8N8F6 280 aa15.35■□□□□ 0.05
USP42-201ENST00000306177 MVB12BQ9H7P6 319 aa15.35■□□□□ 0.05
USP42-201ENST00000306177 CCDC59Q9P031 241 aaKnown RBP15.35■□□□□ 0.05
USP42-201ENST00000306177 IFT52Q9Y366 437 aa15.35■□□□□ 0.05
USP42-201ENST00000306177 PSKH1P11801 424 aa15.35■□□□□ 0.05
USP42-201ENST00000306177 IFI30P13284 250 aa15.35■□□□□ 0.05
USP42-201ENST00000306177 GSTM4Q03013 218 aa15.35■□□□□ 0.05
USP42-201ENST00000306177 ABRAXAS2Q15018 415 aa15.35■□□□□ 0.05
USP42-201ENST00000306177 ASPGQ86U10 573 aa15.35■□□□□ 0.05
USP42-201ENST00000306177 ASPNQ9BXN1 380 aa15.35■□□□□ 0.05
USP42-201ENST00000306177 RHCGQ9UBD6 479 aa15.35■□□□□ 0.05
USP42-201ENST00000306177 STOML2Q9UJZ1 356 aa15.35■□□□□ 0.05
USP42-201ENST00000306177 GP1BBP13224 206 aa15.35■□□□□ 0.05
USP42-201ENST00000306177 OR12D2P58182 307 aa15.35■□□□□ 0.05
USP42-201ENST00000306177 BNIP3Q12983 259 aa15.35■□□□□ 0.05
USP42-201ENST00000306177 CCDC80Q76M96 950 aa15.35■□□□□ 0.05
USP42-201ENST00000306177 TMEM156Q8N614 296 aa15.35■□□□□ 0.05
USP42-201ENST00000306177 ZNF689Q96CS4 500 aaPredicted RBP15.35■□□□□ 0.05
USP42-201ENST00000306177 MCHR1Q99705 422 aa15.35■□□□□ 0.05
USP42-201ENST00000306177 TBC1D24Q9ULP9 559 aa15.35■□□□□ 0.05
USP42-201ENST00000306177 TMA7Q9Y2S6 64 aaKnown RBP15.35■□□□□ 0.05
USP42-201ENST00000306177 MYH10P35580 1976 aa15.35■□□□□ 0.05
USP42-201ENST00000306177 KHNYNO15037 678 aaKnown RBP15.35■□□□□ 0.05
USP42-201ENST00000306177 DFNA5O60443 496 aa15.35■□□□□ 0.05
USP42-201ENST00000306177 KAT7O95251 611 aa15.35■□□□□ 0.05
USP42-201ENST00000306177 FESP07332 822 aa15.35■□□□□ 0.05
USP42-201ENST00000306177 HSD11B1P28845 292 aa15.35■□□□□ 0.05
USP42-201ENST00000306177 KCNC1P48547 511 aa15.35■□□□□ 0.05
USP42-201ENST00000306177 LAPTM4AQ15012 233 aa15.35■□□□□ 0.05
USP42-201ENST00000306177 VMACQ2NL98 169 aa15.35■□□□□ 0.05
USP42-201ENST00000306177 RASSF6Q6ZTQ3 369 aa15.35■□□□□ 0.05
USP42-201ENST00000306177 SDR16C5Q8N3Y7 309 aa15.35■□□□□ 0.05
USP42-201ENST00000306177 C1orf216Q8TAB5 229 aa15.35■□□□□ 0.05
USP42-201ENST00000306177 GNPDA2Q8TDQ7 276 aa15.35■□□□□ 0.05
USP42-201ENST00000306177 SETD7Q8WTS6 366 aaKnown RBP15.35■□□□□ 0.05
USP42-201ENST00000306177 SLC45A3Q96JT2 553 aa15.35■□□□□ 0.05
USP42-201ENST00000306177 POU6F2P78424 691 aaPredicted RBP15.34■□□□□ 0.05
USP42-201ENST00000306177 TUBA3CQ13748 450 aa15.34■□□□□ 0.05
USP42-201ENST00000306177 CHERPQ8IWX8 916 aaKnown RBP15.34■□□□□ 0.05
USP42-201ENST00000306177 TMED9Q9BVK6 235 aa15.34■□□□□ 0.05
USP42-201ENST00000306177 RNF121Q9H920 327 aa15.34■□□□□ 0.05
USP42-201ENST00000306177 WDR6Q9NNW5 1121 aaKnown RBP15.34■□□□□ 0.05
USP42-201ENST00000306177 MID1O15344 667 aa15.34■□□□□ 0.05
USP42-201ENST00000306177 RNGTTO60942 597 aaKnown RBP15.34■□□□□ 0.05
USP42-201ENST00000306177 RFPL2O75678 378 aa15.34■□□□□ 0.05
USP42-201ENST00000306177 RPP14O95059 124 aaKnown RBP15.34■□□□□ 0.05
USP42-201ENST00000306177 ID2Q02363 134 aa15.34■□□□□ 0.05
USP42-201ENST00000306177 ZNF627Q7L945 461 aa15.34■□□□□ 0.05
USP42-201ENST00000306177 CCDC116Q8IYX3 515 aa15.34■□□□□ 0.05
USP42-201ENST00000306177 Q8N9G6 341 aaPredicted RBP15.34■□□□□ 0.05
USP42-201ENST00000306177 PNLDC1Q8NA58 520 aaKnown RBP15.34■□□□□ 0.05
USP42-201ENST00000306177 FIBINQ8TAL6 211 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms