RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 SHQ1Q6PI26 577 aaKnown RBP13.45□□□□□ -0.26
PRKCB-201ENST00000303531 SPATC1Q76KD6 591 aa13.45□□□□□ -0.26
PRKCB-201ENST00000303531 ZNF227Q86WZ6 799 aa13.45□□□□□ -0.26
PRKCB-201ENST00000303531 UMODL1-AS1Q8N2C9 162 aa13.45□□□□□ -0.26
PRKCB-201ENST00000303531 NR4A3Q92570 626 aa13.45□□□□□ -0.26
PRKCB-201ENST00000303531 CDKN2DP55273 166 aa13.44□□□□□ -0.26
PRKCB-201ENST00000303531 AMIGO1Q86WK6 493 aa13.44□□□□□ -0.26
PRKCB-201ENST00000303531 ZNF675Q8TD23 568 aa13.44□□□□□ -0.26
PRKCB-201ENST00000303531 GNPDA2Q8TDQ7 276 aa13.44□□□□□ -0.26
PRKCB-201ENST00000303531 SCAMP4Q969E2 229 aa13.44□□□□□ -0.26
PRKCB-201ENST00000303531 VILLO15195 856 aa13.44□□□□□ -0.26
PRKCB-201ENST00000303531 PROM1O43490 865 aa13.44□□□□□ -0.26
PRKCB-201ENST00000303531 MAFKO60675 156 aa13.44□□□□□ -0.26
PRKCB-201ENST00000303531 LEFTY1O75610 366 aa13.44□□□□□ -0.26
PRKCB-201ENST00000303531 ACRV1P26436 265 aa13.44□□□□□ -0.26
PRKCB-201ENST00000303531 MAB21L1Q13394 359 aa13.44□□□□□ -0.26
PRKCB-201ENST00000303531 CENPSQ8N2Z9 138 aa13.44□□□□□ -0.26
PRKCB-201ENST00000303531 ACOT12Q8WYK0 555 aa13.44□□□□□ -0.26
PRKCB-201ENST00000303531 METTL8Q9H825 291 aaKnown RBP13.44□□□□□ -0.26
PRKCB-201ENST00000303531 PREBQ9HCU5 417 aa13.44□□□□□ -0.26
PRKCB-201ENST00000303531 FKBP14Q9NWM8 211 aa13.44□□□□□ -0.26
PRKCB-201ENST00000303531 COL14A1Q05707 1796 aaKnown RBP13.44□□□□□ -0.26
PRKCB-201ENST00000303531 ZNF878C9JN71 531 aa13.44□□□□□ -0.26
PRKCB-201ENST00000303531 F8A1P23610 371 aa13.44□□□□□ -0.26
PRKCB-201ENST00000303531 SLC6A6P31641 620 aa13.44□□□□□ -0.26
PRKCB-201ENST00000303531 MAP2K4P45985 399 aa13.44□□□□□ -0.26
PRKCB-201ENST00000303531 EIF5AP63241 154 aaKnown RBP13.44□□□□□ -0.26
PRKCB-201ENST00000303531 ST3GAL4Q11206 333 aa13.44□□□□□ -0.26
PRKCB-201ENST00000303531 HNRNPA0Q13151 305 aaKnown RBP13.44□□□□□ -0.26
PRKCB-201ENST00000303531 SLC45A3Q96JT2 553 aa13.44□□□□□ -0.26
PRKCB-201ENST00000303531 C16orf70Q9BSU1 422 aa13.44□□□□□ -0.26
PRKCB-201ENST00000303531 TTTY10Q9BZA0 68 aa13.44□□□□□ -0.26
PRKCB-201ENST00000303531 EXOSC1Q9Y3B2 195 aaKnown RBP13.44□□□□□ -0.26
PRKCB-201ENST00000303531 A0A1W2PQ45 241 aaPredicted RBP13.44□□□□□ -0.26
PRKCB-201ENST00000303531 A0A1W2PQY0 241 aa13.44□□□□□ -0.26
PRKCB-201ENST00000303531 CPED1A4D0V7 1026 aa13.44□□□□□ -0.26
PRKCB-201ENST00000303531 FGF18O76093 207 aa13.44□□□□□ -0.26
PRKCB-201ENST00000303531 STOMP27105 288 aa13.44□□□□□ -0.26
PRKCB-201ENST00000303531 HTR1EP28566 365 aa13.44□□□□□ -0.26
PRKCB-201ENST00000303531 EIF1AXP47813 144 aaKnown RBP13.44□□□□□ -0.26
PRKCB-201ENST00000303531 PIGFQ07326 219 aa13.44□□□□□ -0.26
PRKCB-201ENST00000303531 MCHR1Q99705 422 aa13.44□□□□□ -0.26
PRKCB-201ENST00000303531 TLR9Q9NR96 1032 aa13.44□□□□□ -0.26
PRKCB-201ENST00000303531 PCDHB3Q9Y5E6 796 aa13.44□□□□□ -0.26
PRKCB-201ENST00000303531 ST14Q9Y5Y6 855 aa13.44□□□□□ -0.26
PRKCB-201ENST00000303531 MYH8P13535 1937 aa13.44□□□□□ -0.26
PRKCB-201ENST00000303531 TSPAN6O43657 245 aa13.44□□□□□ -0.26
PRKCB-201ENST00000303531 MT-ND5P03915 603 aa13.44□□□□□ -0.26
PRKCB-201ENST00000303531 RUNDC3AQ59EK9 446 aa13.44□□□□□ -0.26
PRKCB-201ENST00000303531 FANK1Q8TC84 345 aa13.44□□□□□ -0.26
PRKCB-201ENST00000303531 RPL6Q02878 288 aaKnown RBP13.44□□□□□ -0.26
PRKCB-201ENST00000303531 ZNF648Q5T619 568 aaPredicted RBP13.44□□□□□ -0.26
PRKCB-201ENST00000303531 TMEM135Q86UB9 458 aa13.44□□□□□ -0.26
PRKCB-201ENST00000303531 ZFAND4Q86XD8 727 aa13.44□□□□□ -0.26
PRKCB-201ENST00000303531 PEX13Q92968 403 aa13.44□□□□□ -0.26
PRKCB-201ENST00000303531 NXPE2Q96DL1 559 aa13.44□□□□□ -0.26
PRKCB-201ENST00000303531 GRHPRQ9UBQ7 328 aa13.44□□□□□ -0.26
PRKCB-201ENST00000303531 BAZ2AQ9UIF9 1905 aaKnown RBP13.44□□□□□ -0.26
PRKCB-201ENST00000303531 FCER2P06734 321 aa13.43□□□□□ -0.26
PRKCB-201ENST00000303531 GNSP15586 552 aa13.43□□□□□ -0.26
PRKCB-201ENST00000303531 DEFA5Q01523 94 aa13.43□□□□□ -0.26
PRKCB-201ENST00000303531 OR5M3Q8NGP4 307 aa13.43□□□□□ -0.26
PRKCB-201ENST00000303531 SDHAF3Q9NRP4 125 aa13.43□□□□□ -0.26
PRKCB-201ENST00000303531 KLRF1Q9NZS2 232 aa13.43□□□□□ -0.26
PRKCB-201ENST00000303531 A8MU76 341 aa13.43□□□□□ -0.26
PRKCB-201ENST00000303531 EIF1AYO14602 144 aaKnown RBP13.43□□□□□ -0.26
PRKCB-201ENST00000303531 HTR1AP08908 422 aa13.43□□□□□ -0.26
PRKCB-201ENST00000303531 NIPAL4Q0D2K0 466 aa13.43□□□□□ -0.26
PRKCB-201ENST00000303531 GINS1Q14691 196 aa13.43□□□□□ -0.26
PRKCB-201ENST00000303531 DGLUCYQ7Z3D6 616 aa13.43□□□□□ -0.26
PRKCB-201ENST00000303531 ANKFN1Q8N957 763 aa13.43□□□□□ -0.26
PRKCB-201ENST00000303531 TIGARQ9NQ88 270 aa13.43□□□□□ -0.26
PRKCB-201ENST00000303531 MARCH4Q9P2E8 410 aaPredicted RBP13.43□□□□□ -0.26
PRKCB-201ENST00000303531 SMAD9O15198 467 aaKnown RBP13.43□□□□□ -0.26
PRKCB-201ENST00000303531 EEDO75530 441 aaKnown RBP13.43□□□□□ -0.26
PRKCB-201ENST00000303531 HOXB2P14652 356 aa13.43□□□□□ -0.26
PRKCB-201ENST00000303531 GMPRP36959 345 aa13.43□□□□□ -0.26
PRKCB-201ENST00000303531 TMBIM6P55061 237 aa13.43□□□□□ -0.26
PRKCB-201ENST00000303531 TAS2R43P59537 309 aa13.43□□□□□ -0.26
PRKCB-201ENST00000303531 CEACAM7Q14002 265 aa13.43□□□□□ -0.26
PRKCB-201ENST00000303531 ABRAXAS2Q15018 415 aa13.43□□□□□ -0.26
PRKCB-201ENST00000303531 CARM1Q86X55 608 aa13.43□□□□□ -0.26
PRKCB-201ENST00000303531 HCAR2Q8TDS4 363 aa13.43□□□□□ -0.26
PRKCB-201ENST00000303531 RANBP9Q96S59 729 aa13.43□□□□□ -0.26
PRKCB-201ENST00000303531 ENAMQ9NRM1 1142 aa13.43□□□□□ -0.26
PRKCB-201ENST00000303531 AIG1Q9NVV5 245 aa13.43□□□□□ -0.26
PRKCB-201ENST00000303531 CLDND1Q9NY35 253 aa13.43□□□□□ -0.26
PRKCB-201ENST00000303531 SEC14L4Q9UDX3 406 aa13.43□□□□□ -0.26
PRKCB-201ENST00000303531 PCDHB14Q9Y5E9 798 aa13.43□□□□□ -0.26
PRKCB-201ENST00000303531 AOC2O75106 756 aa13.43□□□□□ -0.26
PRKCB-201ENST00000303531 STK19P49842 368 aaPredicted RBP13.43□□□□□ -0.26
PRKCB-201ENST00000303531 OC90Q02509 493 aaPredicted RBP13.43□□□□□ -0.26
PRKCB-201ENST00000303531 SHKBP1Q8TBC3 707 aa13.43□□□□□ -0.26
PRKCB-201ENST00000303531 LOC100509620A0A075B734 347 aa13.43□□□□□ -0.26
PRKCB-201ENST00000303531 CCRL2O00421 344 aa13.43□□□□□ -0.26
PRKCB-201ENST00000303531 DLGAP1O14490 977 aa13.43□□□□□ -0.26
PRKCB-201ENST00000303531 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.43□□□□□ -0.261e-6■■□□□ 13.3
PRKCB-201ENST00000303531 ZNF783Q6ZMS7 281 aa13.43□□□□□ -0.26
PRKCB-201ENST00000303531 MLXQ9UH92 298 aa13.43□□□□□ -0.26
PRKCB-201ENST00000303531 NALCNQ8IZF0 1738 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms