RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 GASTP01350 101 aa14.08□□□□□ -0.16
COL6A2-201ENST00000300527 TYMPP19971 482 aa14.08□□□□□ -0.16
COL6A2-201ENST00000300527 CHMP24386 653 aa14.08□□□□□ -0.16
COL6A2-201ENST00000300527 IL18Q14116 193 aa14.08□□□□□ -0.16
COL6A2-201ENST00000300527 RGNQ15493 299 aa14.08□□□□□ -0.16
COL6A2-201ENST00000300527 SZRD1Q7Z422 152 aa14.08□□□□□ -0.16
COL6A2-201ENST00000300527 HMGN2P46Q86SG4 172 aa14.08□□□□□ -0.16
COL6A2-201ENST00000300527 VPS37AQ8NEZ2 397 aa14.08□□□□□ -0.16
COL6A2-201ENST00000300527 SETD6Q8TBK2 473 aa14.08□□□□□ -0.16
COL6A2-201ENST00000300527 FOXJ1Q92949 421 aa14.08□□□□□ -0.16
COL6A2-201ENST00000300527 ZIC5Q96T25 663 aa14.08□□□□□ -0.16
COL6A2-201ENST00000300527 IL26Q9NPH9 171 aa14.08□□□□□ -0.16
COL6A2-201ENST00000300527 CTPS2Q9NRF8 586 aa14.08□□□□□ -0.16
COL6A2-201ENST00000300527 PLCXD1Q9NUJ7 323 aa14.08□□□□□ -0.16
COL6A2-201ENST00000300527 RFXAPO00287 272 aa14.08□□□□□ -0.16
COL6A2-201ENST00000300527 OR10H3O60404 316 aa14.08□□□□□ -0.16
COL6A2-201ENST00000300527 CSO75390 466 aaKnown RBP14.08□□□□□ -0.16
COL6A2-201ENST00000300527 CPT1AP50416 773 aa14.08□□□□□ -0.16
COL6A2-201ENST00000300527 ZNF284Q2VY69 593 aa14.08□□□□□ -0.16
COL6A2-201ENST00000300527 PXDC1Q5TGL8 231 aa14.08□□□□□ -0.16
COL6A2-201ENST00000300527 SAXO2Q658L1 398 aa14.08□□□□□ -0.16
COL6A2-201ENST00000300527 RFLNAQ6ZTI6 216 aa14.08□□□□□ -0.16
COL6A2-201ENST00000300527 SHFQ7M4L6 423 aa14.08□□□□□ -0.16
COL6A2-201ENST00000300527 TSEN54Q7Z6J9 526 aaKnown RBP14.08□□□□□ -0.16
COL6A2-201ENST00000300527 TSPAN33Q86UF1 283 aa14.08□□□□□ -0.16
COL6A2-201ENST00000300527 TRIM69Q86WT6 500 aa14.08□□□□□ -0.16
COL6A2-201ENST00000300527 LSRQ86X29 649 aaPredicted RBP14.08□□□□□ -0.16
COL6A2-201ENST00000300527 OR8H3Q8N146 312 aa14.08□□□□□ -0.16
COL6A2-201ENST00000300527 RIPOR3Q96MK2 946 aa14.08□□□□□ -0.16
COL6A2-201ENST00000300527 SLC29A3Q9BZD2 475 aa14.08□□□□□ -0.16
COL6A2-201ENST00000300527 NARFLQ9H6Q4 476 aa14.08□□□□□ -0.16
COL6A2-201ENST00000300527 TVP23BQ9NYZ1 205 aa14.08□□□□□ -0.16
COL6A2-201ENST00000300527 CD84Q9UIB8 345 aa14.08□□□□□ -0.16
COL6A2-201ENST00000300527 GLYATL1P3A0A0U1RQE8 302 aa14.07□□□□□ -0.16
COL6A2-201ENST00000300527 UNCXA6NJT0 531 aa14.07□□□□□ -0.16
COL6A2-201ENST00000300527 A8MUA0 341 aa14.07□□□□□ -0.16
COL6A2-201ENST00000300527 M0QZQ0 153 aa14.07□□□□□ -0.16
COL6A2-201ENST00000300527 BTN3A3O00478 584 aa14.07□□□□□ -0.16
COL6A2-201ENST00000300527 SLC2A2P11168 524 aaPredicted RBP14.07□□□□□ -0.16
COL6A2-201ENST00000300527 WNT3P56703 355 aa14.07□□□□□ -0.16
COL6A2-201ENST00000300527 SRSF11Q05519 484 aaKnown RBP14.07□□□□□ -0.16
COL6A2-201ENST00000300527 NFE2Q16621 373 aaPredicted RBP14.07□□□□□ -0.16
COL6A2-201ENST00000300527 IER5LQ5T953 404 aa14.07□□□□□ -0.16
COL6A2-201ENST00000300527 GDF6Q6KF10 455 aaPredicted RBP14.07□□□□□ -0.16
COL6A2-201ENST00000300527 HJURPQ8NCD3 748 aaPredicted RBP14.07□□□□□ -0.16
COL6A2-201ENST00000300527 TESCQ96BS2 214 aa14.07□□□□□ -0.16
COL6A2-201ENST00000300527 MYO19Q96H55 970 aa14.07□□□□□ -0.16
COL6A2-201ENST00000300527 FAM193BQ96PV7 902 aaPredicted RBP14.07□□□□□ -0.16
COL6A2-201ENST00000300527 TM9SF2Q99805 663 aa14.07□□□□□ -0.16
COL6A2-201ENST00000300527 WACQ9BTA9 647 aa14.07□□□□□ -0.16
COL6A2-201ENST00000300527 NDRG2Q9UN36 371 aaKnown RBP14.07□□□□□ -0.16
COL6A2-201ENST00000300527 PRKAB1Q9Y478 270 aa14.07□□□□□ -0.16
COL6A2-201ENST00000300527 GABRR3A8MPY1 467 aa14.07□□□□□ -0.16
COL6A2-201ENST00000300527 TLR4O00206 839 aa14.07□□□□□ -0.16
COL6A2-201ENST00000300527 KDELR3O43731 214 aa14.07□□□□□ -0.16
COL6A2-201ENST00000300527 DDX5P17844 614 aaKnown RBP14.07□□□□□ -0.16
COL6A2-201ENST00000300527 MAPK12P53778 367 aa14.07□□□□□ -0.16
COL6A2-201ENST00000300527 SELENOWP63302 87 aa14.07□□□□□ -0.16
COL6A2-201ENST00000300527 SCARB2Q14108 478 aa14.07□□□□□ -0.16
COL6A2-201ENST00000300527 GPR19Q15760 415 aa14.07□□□□□ -0.16
COL6A2-201ENST00000300527 CRTC2Q53ET0 693 aaPredicted RBP14.07□□□□□ -0.16
COL6A2-201ENST00000300527 LCN1P1Q5VSP4 162 aa14.07□□□□□ -0.16
COL6A2-201ENST00000300527 OTOP2Q7RTS6 562 aa14.07□□□□□ -0.16
COL6A2-201ENST00000300527 FAM20CQ8IXL6 584 aa14.07□□□□□ -0.16
COL6A2-201ENST00000300527 C9orf43Q8TAL5 461 aaPredicted RBP14.07□□□□□ -0.16
COL6A2-201ENST00000300527 A0A1B0GVC2 190 aa14.07□□□□□ -0.16
COL6A2-201ENST00000300527 SLC35F4A4IF30 521 aa14.07□□□□□ -0.16
COL6A2-201ENST00000300527 A6NIN4 97 aa14.07□□□□□ -0.16
COL6A2-201ENST00000300527 I3L521 148 aa14.07□□□□□ -0.16
COL6A2-201ENST00000300527 TEX28O15482 410 aa14.07□□□□□ -0.16
COL6A2-201ENST00000300527 PRAMEF4O60810 478 aa14.07□□□□□ -0.16
COL6A2-201ENST00000300527 NCR1O76036 304 aa14.07□□□□□ -0.16
COL6A2-201ENST00000300527 ERP29P30040 261 aaKnown RBP14.07□□□□□ -0.16
COL6A2-201ENST00000300527 MAP2K3P46734 347 aa14.07□□□□□ -0.16
COL6A2-201ENST00000300527 C1DQ13901 141 aaKnown RBP14.07□□□□□ -0.16
COL6A2-201ENST00000300527 RNASE12Q5GAN4 147 aaKnown RBP14.07□□□□□ -0.16
COL6A2-201ENST00000300527 ATAT1Q5SQI0 421 aa14.07□□□□□ -0.16
COL6A2-201ENST00000300527 PRAMEF9Q5VWM5 478 aa14.07□□□□□ -0.16
COL6A2-201ENST00000300527 CASP12Q6UXS9 341 aa14.07□□□□□ -0.16
COL6A2-201ENST00000300527 WDR53Q7Z5U6 358 aaPredicted RBP14.07□□□□□ -0.16
COL6A2-201ENST00000300527 LRRC20Q8TCA0 184 aa14.07□□□□□ -0.16
COL6A2-201ENST00000300527 CSGALNACT1Q8TDX6 532 aa14.07□□□□□ -0.16
COL6A2-201ENST00000300527 HDHD2Q9H0R4 259 aa14.07□□□□□ -0.16
COL6A2-201ENST00000300527 ASAH2Q9NR71 780 aa14.07□□□□□ -0.16
COL6A2-201ENST00000300527 ING3Q9NXR8 418 aa14.07□□□□□ -0.16
COL6A2-201ENST00000300527 TMCC3Q9ULS5 477 aa14.07□□□□□ -0.16
COL6A2-201ENST00000300527 PRAMEF33A0A0G2JMD5 474 aa14.06□□□□□ -0.16
COL6A2-201ENST00000300527 LOC105371267A0A1B0GV96 52 aa14.06□□□□□ -0.16
COL6A2-201ENST00000300527 PRAMEF10O60809 474 aa14.06□□□□□ -0.16
COL6A2-201ENST00000300527 C6orf47O95873 294 aa14.06□□□□□ -0.16
COL6A2-201ENST00000300527 HOXB6P17509 224 aaKnown RBP14.06□□□□□ -0.16
COL6A2-201ENST00000300527 CR2P20023 1033 aa14.06□□□□□ -0.16
COL6A2-201ENST00000300527 CRISP1P54107 249 aa14.06□□□□□ -0.16
COL6A2-201ENST00000300527 RPS26P62854 115 aaKnown RBP14.06□□□□□ -0.16
COL6A2-201ENST00000300527 ABRQ12979 859 aa14.06□□□□□ -0.16
COL6A2-201ENST00000300527 FLYWCH1Q4VC44 716 aa14.06□□□□□ -0.16
COL6A2-201ENST00000300527 DDI2Q5TDH0 399 aa14.06□□□□□ -0.16
COL6A2-201ENST00000300527 CERS6Q6ZMG9 384 aa14.06□□□□□ -0.16
COL6A2-201ENST00000300527 DEF8Q6ZN54 512 aa14.06□□□□□ -0.16
COL6A2-201ENST00000300527 ASB18Q6ZVZ8 466 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms