RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 LPPQ93052 612 aa12.97□□□□□ -0.33
RPUSD4-201ENST00000298317 TOE1Q96GM8 510 aaKnown RBP12.97□□□□□ -0.33
RPUSD4-201ENST00000298317 TMEM80Q96HE8 168 aa12.97□□□□□ -0.33
RPUSD4-201ENST00000298317 FCRL1Q96LA6 429 aa12.97□□□□□ -0.33
RPUSD4-201ENST00000298317 APOLD1Q96LR9 279 aa12.97□□□□□ -0.33
RPUSD4-201ENST00000298317 SAMD11Q96NU1 681 aa12.97□□□□□ -0.33
RPUSD4-201ENST00000298317 FERD3LQ96RJ6 166 aa12.97□□□□□ -0.33
RPUSD4-201ENST00000298317 ZSCAN5AQ9BUG6 496 aa12.97□□□□□ -0.33
RPUSD4-201ENST00000298317 PAK6Q9NQU5 681 aaPredicted RBP12.97□□□□□ -0.33
RPUSD4-201ENST00000298317 MCUBQ9NWR8 336 aa12.97□□□□□ -0.33
RPUSD4-201ENST00000298317 FAM120CQ9NX05 1096 aaKnown RBP12.97□□□□□ -0.33
RPUSD4-201ENST00000298317 CLEC2DQ9UHP7 191 aa12.97□□□□□ -0.33
RPUSD4-201ENST00000298317 NDRG2Q9UN36 371 aaKnown RBP12.97□□□□□ -0.33
RPUSD4-201ENST00000298317 SSR3Q9UNL2 185 aa12.97□□□□□ -0.33
RPUSD4-201ENST00000298317 CHD5Q8TDI0 1954 aa12.97□□□□□ -0.33
RPUSD4-201ENST00000298317 ARL5CA6NH57 179 aa12.97□□□□□ -0.33
RPUSD4-201ENST00000298317 FZD9O00144 591 aa12.97□□□□□ -0.33
RPUSD4-201ENST00000298317 PITPNM1O00562 1244 aa12.97□□□□□ -0.33
RPUSD4-201ENST00000298317 SGTAO43765 313 aa12.97□□□□□ -0.33
RPUSD4-201ENST00000298317 PDGFAP04085 211 aa12.97□□□□□ -0.33
RPUSD4-201ENST00000298317 HBQ1P09105 142 aa12.97□□□□□ -0.33
RPUSD4-201ENST00000298317 CKMT1AP12532 417 aa12.97□□□□□ -0.33
RPUSD4-201ENST00000298317 ATF4P18848 351 aaPredicted RBP12.97□□□□□ -0.33
RPUSD4-201ENST00000298317 TNFRSF1BP20333 461 aa12.97□□□□□ -0.33
RPUSD4-201ENST00000298317 RPS3P23396 243 aaKnown RBP eCLIP12.97□□□□□ -0.33
RPUSD4-201ENST00000298317 SSTR4P31391 388 aa12.97□□□□□ -0.33
RPUSD4-201ENST00000298317 MXD1Q05195 221 aa12.97□□□□□ -0.33
RPUSD4-201ENST00000298317 CD300LGQ6UXG3 332 aa12.97□□□□□ -0.33
RPUSD4-201ENST00000298317 MBOAT1Q6ZNC8 495 aa12.97□□□□□ -0.33
RPUSD4-201ENST00000298317 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.97□□□□□ -0.33
RPUSD4-201ENST00000298317 OR8J2Q8NGG1 315 aa12.97□□□□□ -0.33
RPUSD4-201ENST00000298317 OR10Z1Q8NGY1 313 aa12.97□□□□□ -0.33
RPUSD4-201ENST00000298317 HERVK_113Q902F9 699 aa12.97□□□□□ -0.33
RPUSD4-201ENST00000298317 MAL2Q969L2 176 aa12.97□□□□□ -0.33
RPUSD4-201ENST00000298317 UPRTQ96BW1 309 aa12.97□□□□□ -0.33
RPUSD4-201ENST00000298317 CCDC120Q96HB5 630 aa12.97□□□□□ -0.33
RPUSD4-201ENST00000298317 HYLS1Q96M11 299 aa12.97□□□□□ -0.33
RPUSD4-201ENST00000298317 DCLRE1CQ96SD1 692 aaKnown RBP12.97□□□□□ -0.33
RPUSD4-201ENST00000298317 ELOVL6Q9H5J4 265 aa12.97□□□□□ -0.33
RPUSD4-201ENST00000298317 TRIM45Q9H8W5 580 aaPredicted RBP12.97□□□□□ -0.33
RPUSD4-201ENST00000298317 RDH14Q9HBH5 336 aa12.97□□□□□ -0.33
RPUSD4-201ENST00000298317 FAM105AQ9NUU6 356 aa12.97□□□□□ -0.33
RPUSD4-201ENST00000298317 ENOPH1Q9UHY7 261 aa12.97□□□□□ -0.33
RPUSD4-201ENST00000298317 WASHC1A8K0Z3 465 aa12.96□□□□□ -0.33
RPUSD4-201ENST00000298317 ANKRD66B4E2M5 251 aa12.96□□□□□ -0.33
RPUSD4-201ENST00000298317 M0QZQ0 153 aa12.96□□□□□ -0.33
RPUSD4-201ENST00000298317 WWP2O00308 870 aa12.96□□□□□ -0.33
RPUSD4-201ENST00000298317 MYL12BO14950 172 aa12.96□□□□□ -0.33
RPUSD4-201ENST00000298317 YY2O15391 372 aa12.96□□□□□ -0.33
RPUSD4-201ENST00000298317 PRMT3O60678 531 aa12.96□□□□□ -0.33
RPUSD4-201ENST00000298317 NBNO60934 754 aa12.96□□□□□ -0.33
RPUSD4-201ENST00000298317 B3GAT3O94766 335 aa12.96□□□□□ -0.33
RPUSD4-201ENST00000298317 CPSF4O95639 269 aaKnown RBP12.96□□□□□ -0.33
RPUSD4-201ENST00000298317 MYL12AP19105 171 aa12.96□□□□□ -0.33
RPUSD4-201ENST00000298317 DGKAP23743 735 aa12.96□□□□□ -0.33
RPUSD4-201ENST00000298317 LIMS1P48059 325 aa12.96□□□□□ -0.33
RPUSD4-201ENST00000298317 MLLT11Q13015 90 aaPredicted RBP12.96□□□□□ -0.33
RPUSD4-201ENST00000298317 PTPRRQ15256 657 aa12.96□□□□□ -0.33
RPUSD4-201ENST00000298317 ZNF628Q5EBL2 1059 aa12.96□□□□□ -0.33
RPUSD4-201ENST00000298317 MEDAGQ5VYS4 303 aa12.96□□□□□ -0.33
RPUSD4-201ENST00000298317 NOXRED1Q6NXP6 359 aa12.96□□□□□ -0.33
RPUSD4-201ENST00000298317 ATP6V1C2Q8NEY4 427 aa12.96□□□□□ -0.33
RPUSD4-201ENST00000298317 CSGALNACT1Q8TDX6 532 aa12.96□□□□□ -0.33
RPUSD4-201ENST00000298317 AP2M1Q96CW1 435 aa12.96□□□□□ -0.33
RPUSD4-201ENST00000298317 FAM193BQ96PV7 902 aaPredicted RBP12.96□□□□□ -0.33
RPUSD4-201ENST00000298317 FAM129BQ96TA1 746 aa12.96□□□□□ -0.33
RPUSD4-201ENST00000298317 MND1Q9BWT6 205 aa12.96□□□□□ -0.33
RPUSD4-201ENST00000298317 ELP3Q9H9T3 547 aa12.96□□□□□ -0.33
RPUSD4-201ENST00000298317 WASH6PQ9NQA3 447 aa12.96□□□□□ -0.33
RPUSD4-201ENST00000298317 THSD1Q9NS62 852 aa12.96□□□□□ -0.33
RPUSD4-201ENST00000298317 ELF5Q9UKW6 265 aaPredicted RBP12.96□□□□□ -0.33
RPUSD4-201ENST00000298317 NOSIPQ9Y314 301 aaKnown RBP12.96□□□□□ -0.33
RPUSD4-201ENST00000298317 RAI2Q9Y5P3 530 aa12.96□□□□□ -0.33
RPUSD4-201ENST00000298317 NUP214P35658 2090 aaPredicted RBP12.96□□□□□ -0.33
RPUSD4-201ENST00000298317 C1orf226A1L170 272 aa12.96□□□□□ -0.34
RPUSD4-201ENST00000298317 PRAMEF25A6NGN4 478 aa12.96□□□□□ -0.34
RPUSD4-201ENST00000298317 PLD2O14939 933 aa12.96□□□□□ -0.34
RPUSD4-201ENST00000298317 ENTPD6O75354 484 aa12.96□□□□□ -0.34
RPUSD4-201ENST00000298317 SCO1O75880 301 aa12.96□□□□□ -0.34
RPUSD4-201ENST00000298317 SLC22A5O76082 557 aa12.96□□□□□ -0.34
RPUSD4-201ENST00000298317 OR7A10O76100 309 aa12.96□□□□□ -0.34
RPUSD4-201ENST00000298317 CNR2P34972 360 aa12.96□□□□□ -0.34
RPUSD4-201ENST00000298317 SRP54P61011 504 aaKnown RBP12.96□□□□□ -0.34
RPUSD4-201ENST00000298317 GNA13Q14344 377 aa12.96□□□□□ -0.34
RPUSD4-201ENST00000298317 TEAD4Q15561 434 aa12.96□□□□□ -0.34
RPUSD4-201ENST00000298317 IFI44LQ53G44 452 aa12.96□□□□□ -0.34
RPUSD4-201ENST00000298317 SCN4BQ8IWT1 228 aa12.96□□□□□ -0.34
RPUSD4-201ENST00000298317 PHC2Q8IXK0 858 aa12.96□□□□□ -0.34
RPUSD4-201ENST00000298317 ANKRD53Q8N9V6 530 aa12.96□□□□□ -0.34
RPUSD4-201ENST00000298317 VPS37AQ8NEZ2 397 aa12.96□□□□□ -0.34
RPUSD4-201ENST00000298317 TTLQ8NG68 377 aa12.96□□□□□ -0.34
RPUSD4-201ENST00000298317 ZBED6CLQ96FA7 236 aaPredicted RBP12.96□□□□□ -0.34
RPUSD4-201ENST00000298317 MARVELD1Q9BSK0 173 aa12.96□□□□□ -0.34
RPUSD4-201ENST00000298317 EBPLQ9BY08 206 aa12.96□□□□□ -0.34
RPUSD4-201ENST00000298317 TXNL4BQ9NX01 149 aaKnown RBP12.96□□□□□ -0.34
RPUSD4-201ENST00000298317 PCDHGC4Q9Y5F7 938 aa12.96□□□□□ -0.34
RPUSD4-201ENST00000298317 CXCL11O14625 94 aa12.95□□□□□ -0.34
RPUSD4-201ENST00000298317 SLC43A1O75387 559 aa12.95□□□□□ -0.34
RPUSD4-201ENST00000298317 CLEC2LP0C7M8 214 aa12.95□□□□□ -0.34
RPUSD4-201ENST00000298317 SRCP12931 536 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms