RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 A0A096LPK6 155 aa13.55□□□□□ -0.24
HMGN3-201ENST00000275036 KIF2AO00139 706 aaPredicted RBP13.55□□□□□ -0.24
HMGN3-201ENST00000275036 ERI3O43414 337 aaKnown RBP13.55□□□□□ -0.24
HMGN3-201ENST00000275036 CLEC3AO75596 197 aa13.55□□□□□ -0.24
HMGN3-201ENST00000275036 WDPCPO95876 746 aa13.55□□□□□ -0.24
HMGN3-201ENST00000275036 S100BP04271 92 aaPredicted RBP13.55□□□□□ -0.24
HMGN3-201ENST00000275036 RNH1P13489 461 aaKnown RBP13.55□□□□□ -0.24
HMGN3-201ENST00000275036 ICAM2P13598 275 aa13.55□□□□□ -0.24
HMGN3-201ENST00000275036 MAOAP21397 527 aa13.55□□□□□ -0.24
HMGN3-201ENST00000275036 TNFSF10P50591 281 aa13.55□□□□□ -0.24
HMGN3-201ENST00000275036 STXBP1P61764 594 aaKnown RBP13.55□□□□□ -0.24
HMGN3-201ENST00000275036 SKP1P63208 163 aa13.55□□□□□ -0.24
HMGN3-201ENST00000275036 BTN3A2P78410 334 aa13.55□□□□□ -0.24
HMGN3-201ENST00000275036 ARG2P78540 354 aa13.55□□□□□ -0.24
HMGN3-201ENST00000275036 SRSF11Q05519 484 aaKnown RBP13.55□□□□□ -0.24
HMGN3-201ENST00000275036 CHIT1Q13231 466 aa13.55□□□□□ -0.24
HMGN3-201ENST00000275036 ADPRMQ3LIE5 342 aa13.55□□□□□ -0.24
HMGN3-201ENST00000275036 PAPD4Q6PIY7 484 aaKnown RBP13.55□□□□□ -0.24
HMGN3-201ENST00000275036 LRRC70Q7Z2Q7 622 aa13.55□□□□□ -0.24
HMGN3-201ENST00000275036 OR1N1Q8NGS0 311 aa13.55□□□□□ -0.24
HMGN3-201ENST00000275036 KIF18AQ8NI77 898 aa13.55□□□□□ -0.24
HMGN3-201ENST00000275036 RHEBL1Q8TAI7 183 aa13.55□□□□□ -0.24
HMGN3-201ENST00000275036 UHMK1Q8TAS1 419 aaKnown RBP13.55□□□□□ -0.24
HMGN3-201ENST00000275036 QRFPRQ96P65 431 aa13.55□□□□□ -0.24
HMGN3-201ENST00000275036 TAAR6Q96RI8 345 aa13.55□□□□□ -0.24
HMGN3-201ENST00000275036 PITHD1Q9GZP4 211 aaPredicted RBP13.55□□□□□ -0.24
HMGN3-201ENST00000275036 RHBGQ9H310 441 aa13.55□□□□□ -0.24
HMGN3-201ENST00000275036 CLK4Q9HAZ1 481 aaKnown RBP13.55□□□□□ -0.24
HMGN3-201ENST00000275036 ZNF358Q9NW07 568 aa13.55□□□□□ -0.24
HMGN3-201ENST00000275036 IGKV3D-11A0A0A0MRZ8 115 aa13.54□□□□□ -0.24
HMGN3-201ENST00000275036 WIPF3A6NGB9 483 aa13.54□□□□□ -0.24
HMGN3-201ENST00000275036 ANKDD1BA6NHY2 528 aa13.54□□□□□ -0.24
HMGN3-201ENST00000275036 LRRC14BA6NHZ5 514 aa13.54□□□□□ -0.24
HMGN3-201ENST00000275036 K7EPI3 171 aa13.54□□□□□ -0.24
HMGN3-201ENST00000275036 MAN1A2O60476 641 aa13.54□□□□□ -0.24
HMGN3-201ENST00000275036 KLHL2O95198 593 aa13.54□□□□□ -0.24
HMGN3-201ENST00000275036 LDLRP01130 860 aa13.54□□□□□ -0.24
HMGN3-201ENST00000275036 JAK1P23458 1154 aa13.54□□□□□ -0.24
HMGN3-201ENST00000275036 GSTM2P28161 218 aa13.54□□□□□ -0.24
HMGN3-201ENST00000275036 TYK2P29597 1187 aa13.54□□□□□ -0.24
HMGN3-201ENST00000275036 CASP2P42575 452 aa13.54□□□□□ -0.24
HMGN3-201ENST00000275036 MAGEA12P43365 314 aa13.54□□□□□ -0.24
HMGN3-201ENST00000275036 SERPINB8P50452 374 aa13.54□□□□□ -0.24
HMGN3-201ENST00000275036 ST13P50502 369 aaKnown RBP13.54□□□□□ -0.24
HMGN3-201ENST00000275036 HNRNPFP52597 415 aaKnown RBP13.54□□□□□ -0.24
HMGN3-201ENST00000275036 OR4D2P58180 307 aa13.54□□□□□ -0.24
HMGN3-201ENST00000275036 IRF8Q02556 426 aa13.54□□□□□ -0.24
HMGN3-201ENST00000275036 ACAP2Q15057 778 aa13.54□□□□□ -0.24
HMGN3-201ENST00000275036 TBCCQ15814 346 aa13.54□□□□□ -0.24
HMGN3-201ENST00000275036 FAM83EQ2M2I3 478 aa13.54□□□□□ -0.24
HMGN3-201ENST00000275036 FCRLBQ6BAA4 426 aa13.54□□□□□ -0.24
HMGN3-201ENST00000275036 H3F3CQ6NXT2 135 aa13.54□□□□□ -0.24
HMGN3-201ENST00000275036 QSOX2Q6ZRP7 698 aa13.54□□□□□ -0.24
HMGN3-201ENST00000275036 CEP128Q6ZU80 1094 aa13.54□□□□□ -0.24
HMGN3-201ENST00000275036 LRRN4CLQ8ND94 238 aa13.54□□□□□ -0.24
HMGN3-201ENST00000275036 ST6GALNAC3Q8NDV1 305 aa13.54□□□□□ -0.24
HMGN3-201ENST00000275036 TMEM52Q8NDY8 209 aa13.54□□□□□ -0.24
HMGN3-201ENST00000275036 OR2L5Q8NG80 312 aa13.54□□□□□ -0.24
HMGN3-201ENST00000275036 FAR1Q8WVX9 515 aa13.54□□□□□ -0.24
HMGN3-201ENST00000275036 HAS2Q92819 552 aa13.54□□□□□ -0.24
HMGN3-201ENST00000275036 ISL2Q96A47 359 aa13.54□□□□□ -0.24
HMGN3-201ENST00000275036 SEC16BQ96JE7 1060 aa13.54□□□□□ -0.24
HMGN3-201ENST00000275036 PTCHD1Q96NR3 888 aa13.54□□□□□ -0.24
HMGN3-201ENST00000275036 PAFAH2Q99487 392 aa13.54□□□□□ -0.24
HMGN3-201ENST00000275036 SLX1AQ9BQ83 275 aa13.54□□□□□ -0.24
HMGN3-201ENST00000275036 EFCAB11Q9BUY7 163 aa13.54□□□□□ -0.24
HMGN3-201ENST00000275036 REXO4Q9GZR2 422 aaKnown RBP13.54□□□□□ -0.24
HMGN3-201ENST00000275036 NECTIN3Q9NQS3 549 aa13.54□□□□□ -0.24
HMGN3-201ENST00000275036 OPTCQ9UBM4 332 aa13.54□□□□□ -0.24
HMGN3-201ENST00000275036 PLEKHB1Q9UF11 243 aaPredicted RBP13.54□□□□□ -0.24
HMGN3-201ENST00000275036 NFU1Q9UMS0 254 aa13.54□□□□□ -0.24
HMGN3-201ENST00000275036 CLDN16Q9Y5I7 305 aa13.54□□□□□ -0.24
HMGN3-201ENST00000275036 UNC79Q9P2D8 2635 aa13.53□□□□□ -0.24
HMGN3-201ENST00000275036 TCRBV16S1A1N1A0A5B0 115 aa13.53□□□□□ -0.24
HMGN3-201ENST00000275036 A1L4Q6 167 aa13.53□□□□□ -0.24
HMGN3-201ENST00000275036 DYTNA2CJ06 578 aa13.53□□□□□ -0.24
HMGN3-201ENST00000275036 A8MUI8 341 aa13.53□□□□□ -0.24
HMGN3-201ENST00000275036 TGFBR3LH3BV60 316 aa13.53□□□□□ -0.24
HMGN3-201ENST00000275036 KLK8O60259 260 aa13.53□□□□□ -0.24
HMGN3-201ENST00000275036 PRMT3O60678 531 aa13.53□□□□□ -0.24
HMGN3-201ENST00000275036 CERS1P27544 350 aa13.53□□□□□ -0.24
HMGN3-201ENST00000275036 PLA2G16P53816 162 aa13.53□□□□□ -0.24
HMGN3-201ENST00000275036 SLC26A5P58743 744 aa13.53□□□□□ -0.24
HMGN3-201ENST00000275036 ZNF33BQ06732 778 aa13.53□□□□□ -0.24
HMGN3-201ENST00000275036 ACTN3Q08043 901 aaPredicted RBP13.53□□□□□ -0.24
HMGN3-201ENST00000275036 PCDH1Q08174 1060 aa13.53□□□□□ -0.24
HMGN3-201ENST00000275036 SETDB1Q15047 1291 aa13.53□□□□□ -0.24
HMGN3-201ENST00000275036 TECRLQ5HYJ1 363 aa13.53□□□□□ -0.24
HMGN3-201ENST00000275036 ZNF324BQ6AW86 544 aaPredicted RBP13.53□□□□□ -0.24
HMGN3-201ENST00000275036 RPUSD3Q6P087 351 aaKnown RBP13.53□□□□□ -0.24
HMGN3-201ENST00000275036 ABHD17CQ6PCB6 329 aa13.53□□□□□ -0.24
HMGN3-201ENST00000275036 CCDC91Q7Z6B0 441 aa13.53□□□□□ -0.24
HMGN3-201ENST00000275036 UBE3DQ7Z6J8 389 aa13.53□□□□□ -0.24
HMGN3-201ENST00000275036 RNF175Q8N4F7 328 aa13.53□□□□□ -0.24
HMGN3-201ENST00000275036 M1APQ8TC57 530 aa13.53□□□□□ -0.24
HMGN3-201ENST00000275036 ZNF473Q8WTR7 871 aaKnown RBP13.53□□□□□ -0.24
HMGN3-201ENST00000275036 DCAKDQ8WVC6 231 aa13.53□□□□□ -0.24
HMGN3-201ENST00000275036 FAR2Q96K12 515 aa13.53□□□□□ -0.24
HMGN3-201ENST00000275036 MAGEB10Q96LZ2 347 aaPredicted RBP13.53□□□□□ -0.24
HMGN3-201ENST00000275036 F2RL3Q96RI0 385 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms