RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 HIST1H1TP22492 207 aaPredicted RBP16.32■□□□□ 0.2
SKP2-201ENST00000274254 ATP5A1P25705 553 aaKnown RBP16.32■□□□□ 0.2
SKP2-201ENST00000274254 ID4P47928 161 aa16.32■□□□□ 0.2
SKP2-201ENST00000274254 RAE1P78406 368 aaKnown RBP16.32■□□□□ 0.2
SKP2-201ENST00000274254 BTN3A2P78410 334 aa16.32■□□□□ 0.2
SKP2-201ENST00000274254 CAMK2BQ13554 666 aa16.32■□□□□ 0.2
SKP2-201ENST00000274254 SMU1Q2TAY7 513 aa16.32■□□□□ 0.2
SKP2-201ENST00000274254 GALNTL6Q49A17 601 aa16.32■□□□□ 0.2
SKP2-201ENST00000274254 OGFOD2Q6N063 350 aa16.32■□□□□ 0.2
SKP2-201ENST00000274254 NIPAL1Q6NVV3 410 aa16.32■□□□□ 0.2
SKP2-201ENST00000274254 FOXR1Q6PIV2 292 aa16.32■□□□□ 0.2
SKP2-201ENST00000274254 TTLL10Q6ZVT0 673 aa16.32■□□□□ 0.2
SKP2-201ENST00000274254 CPLX4Q7Z7G2 160 aa16.32■□□□□ 0.2
SKP2-201ENST00000274254 AMER3Q8N944 861 aa16.32■□□□□ 0.2
SKP2-201ENST00000274254 ROGDIQ9GZN7 287 aa16.32■□□□□ 0.2
SKP2-201ENST00000274254 FAM107BQ9H098 131 aa16.32■□□□□ 0.2
SKP2-201ENST00000274254 ANKHQ9HCJ1 492 aa16.32■□□□□ 0.2
SKP2-201ENST00000274254 WASF3Q9UPY6 502 aa16.32■□□□□ 0.2
SKP2-201ENST00000274254 TMED5Q9Y3A6 229 aa16.32■□□□□ 0.2
SKP2-201ENST00000274254 NAALAD2Q9Y3Q0 740 aa16.32■□□□□ 0.2
SKP2-201ENST00000274254 A0A088AWK7 358 aa16.31■□□□□ 0.2
SKP2-201ENST00000274254 A0A0A6YYC8 382 aaPredicted RBP16.31■□□□□ 0.2
SKP2-201ENST00000274254 A0A0A6YYD5 115 aa16.31■□□□□ 0.2
SKP2-201ENST00000274254 H0YIG0 161 aa16.31■□□□□ 0.2
SKP2-201ENST00000274254 I3L1I5 382 aaPredicted RBP16.31■□□□□ 0.2
SKP2-201ENST00000274254 CPNE3O75131 537 aaKnown RBP16.31■□□□□ 0.2
SKP2-201ENST00000274254 EEDO75530 441 aaKnown RBP16.31■□□□□ 0.2
SKP2-201ENST00000274254 TNFSF15O95150 251 aa16.31■□□□□ 0.2
SKP2-201ENST00000274254 NTRK1P04629 796 aa16.31■□□□□ 0.2
SKP2-201ENST00000274254 ACPPP15309 386 aa16.31■□□□□ 0.2
SKP2-201ENST00000274254 ZNF10P21506 573 aaPredicted RBP16.31■□□□□ 0.2
SKP2-201ENST00000274254 TPP2P29144 1249 aaPredicted RBP16.31■□□□□ 0.2
SKP2-201ENST00000274254 RORAP35398 523 aa16.31■□□□□ 0.2
SKP2-201ENST00000274254 SSR2P43308 183 aa16.31■□□□□ 0.2
SKP2-201ENST00000274254 MTTPP55157 894 aa16.31■□□□□ 0.2
SKP2-201ENST00000274254 RPL38P63173 70 aaKnown RBP16.31■□□□□ 0.2
SKP2-201ENST00000274254 GABREP78334 506 aa16.31■□□□□ 0.2
SKP2-201ENST00000274254 LSM12Q3MHD2 195 aaKnown RBP16.31■□□□□ 0.2
SKP2-201ENST00000274254 TMEM164Q5U3C3 297 aa16.31■□□□□ 0.2
SKP2-201ENST00000274254 ZNF385CQ66K41 422 aaPredicted RBP16.31■□□□□ 0.2
SKP2-201ENST00000274254 IGF2-ASQ6U949 168 aa16.31■□□□□ 0.2
SKP2-201ENST00000274254 PAGE2Q7Z2X7 111 aa16.31■□□□□ 0.2
SKP2-201ENST00000274254 NUDT13Q86X67 352 aa16.31■□□□□ 0.2
SKP2-201ENST00000274254 ZCCHC7Q8N3Z6 543 aaKnown RBP16.31■□□□□ 0.2
SKP2-201ENST00000274254 ACOT4Q8N9L9 421 aa16.31■□□□□ 0.2
SKP2-201ENST00000274254 OR9A4Q8NGU2 314 aa16.31■□□□□ 0.2
SKP2-201ENST00000274254 CEP70Q8NHQ1 597 aa16.31■□□□□ 0.2
SKP2-201ENST00000274254 PROKR1Q8TCW9 393 aa16.31■□□□□ 0.2
SKP2-201ENST00000274254 LRFN5Q96NI6 719 aa16.31■□□□□ 0.2
SKP2-201ENST00000274254 SLC46A1Q96NT5 459 aa16.31■□□□□ 0.2
SKP2-201ENST00000274254 GBP5Q96PP8 586 aa16.31■□□□□ 0.2
SKP2-201ENST00000274254 SERINC2Q96SA4 455 aa16.31■□□□□ 0.2
SKP2-201ENST00000274254 ELAC2Q9BQ52 826 aaKnown RBP16.31■□□□□ 0.2
SKP2-201ENST00000274254 CCDC28BQ9BUN5 200 aa16.31■□□□□ 0.2
SKP2-201ENST00000274254 TMEM120AQ9BXJ8 343 aa16.31■□□□□ 0.2
SKP2-201ENST00000274254 SPRY4Q9C004 299 aa16.31■□□□□ 0.2
SKP2-201ENST00000274254 NRSN2Q9GZP1 204 aa16.31■□□□□ 0.2
SKP2-201ENST00000274254 TCF7L2Q9NQB0 619 aa16.31■□□□□ 0.2
SKP2-201ENST00000274254 TXLNGQ9NUQ3 528 aa16.31■□□□□ 0.2
SKP2-201ENST00000274254 TMEM184BQ9Y519 407 aaPredicted RBP16.31■□□□□ 0.2
SKP2-201ENST00000274254 AHCTF1Q8WYP5 2266 aa16.31■□□□□ 0.2
SKP2-201ENST00000274254 SNX3O60493 162 aa16.3■□□□□ 0.2
SKP2-201ENST00000274254 KIAA0754O94854 1291 aa16.3■□□□□ 0.2
SKP2-201ENST00000274254 KLK1P06870 262 aa16.3■□□□□ 0.2
SKP2-201ENST00000274254 LBPP18428 481 aa16.3■□□□□ 0.2
SKP2-201ENST00000274254 ITGAXP20702 1163 aa16.3■□□□□ 0.2
SKP2-201ENST00000274254 ALAS2P22557 587 aa16.3■□□□□ 0.2
SKP2-201ENST00000274254 CERS1P27544 350 aa16.3■□□□□ 0.2
SKP2-201ENST00000274254 TIA1P31483 386 aaKnown RBP eCLIP16.3■□□□□ 0.2
SKP2-201ENST00000274254 ERVK-8P63133 956 aa16.3■□□□□ 0.2
SKP2-201ENST00000274254 SKP1P63208 163 aa16.3■□□□□ 0.2
SKP2-201ENST00000274254 EMX2Q04743 252 aa16.3■□□□□ 0.2
SKP2-201ENST00000274254 FOXC1Q12948 553 aa16.3■□□□□ 0.2
SKP2-201ENST00000274254 NOXRED1Q6NXP6 359 aa16.3■□□□□ 0.2
SKP2-201ENST00000274254 PRMT9Q6P2P2 845 aa16.3■□□□□ 0.2
SKP2-201ENST00000274254 ACAD11Q709F0 780 aa16.3■□□□□ 0.2
SKP2-201ENST00000274254 SPATA21Q7Z572 469 aa16.3■□□□□ 0.2
SKP2-201ENST00000274254 FNDC5Q8NAU1 212 aa16.3■□□□□ 0.2
SKP2-201ENST00000274254 C10orf82Q8WW14 230 aa16.3■□□□□ 0.2
SKP2-201ENST00000274254 CCT8L2Q96SF2 557 aa16.3■□□□□ 0.2
SKP2-201ENST00000274254 ULBP3Q9BZM4 244 aa16.3■□□□□ 0.2
SKP2-201ENST00000274254 SLC7A5P2Q9GIP4 190 aa16.3■□□□□ 0.2
SKP2-201ENST00000274254 COPS7BQ9H9Q2 264 aaPredicted RBP16.3■□□□□ 0.2
SKP2-201ENST00000274254 MCM8Q9UJA3 840 aa16.3■□□□□ 0.2
SKP2-201ENST00000274254 CDC14AQ9UNH5 594 aa16.3■□□□□ 0.2
SKP2-201ENST00000274254 SGK494L7N484 410 aa16.29■□□□□ 0.2
SKP2-201ENST00000274254 NVLO15381 856 aaKnown RBP16.29■□□□□ 0.2
SKP2-201ENST00000274254 TMPRSS11DO60235 418 aa16.29■□□□□ 0.2
SKP2-201ENST00000274254 PCDH7O60245 1069 aa16.29■□□□□ 0.2
SKP2-201ENST00000274254 ONECUT2O95948 504 aa16.29■□□□□ 0.2
SKP2-201ENST00000274254 FAM107AO95990 144 aa16.29■□□□□ 0.2
SKP2-201ENST00000274254 GBAP04062 536 aa16.29■□□□□ 0.2
SKP2-201ENST00000274254 AVPR1BP47901 424 aa16.29■□□□□ 0.2
SKP2-201ENST00000274254 ARFIP2P53365 341 aa16.29■□□□□ 0.2
SKP2-201ENST00000274254 SF3A3Q12874 501 aaKnown RBP eCLIP16.29■□□□□ 0.2
SKP2-201ENST00000274254 RTP5Q14D33 572 aa16.29■□□□□ 0.2
SKP2-201ENST00000274254 MRM1Q6IN84 353 aaKnown RBP16.29■□□□□ 0.2
SKP2-201ENST00000274254 PIGWQ7Z7B1 504 aa16.29■□□□□ 0.2
SKP2-201ENST00000274254 CLIP3Q96DZ5 547 aa16.29■□□□□ 0.2
SKP2-201ENST00000274254 RNF31Q96EP0 1072 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms