RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 RNF130Q86XS8 419 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 KREMEN2Q8NCW0 462 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 OR13F1Q8NGS4 319 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 TSSK6Q9BXA6 273 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 PPIL3Q9H2H8 161 aaKnown RBP11.14□□□□□ -0.63
VPS33A-201ENST00000267199 FXYD6-FXYD2A0A087WZ82 144 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 PI15O43692 258 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 STC2O76061 302 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 PRNPP04156 253 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 MAN2A2P49641 1150 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 PPIGQ13427 754 aaKnown RBP eCLIP11.14□□□□□ -0.63
VPS33A-201ENST00000267199 ADAM15Q13444 863 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 SF1Q15637 639 aaKnown RBP11.14□□□□□ -0.63
VPS33A-201ENST00000267199 ARSIQ5FYB1 569 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 RTP2Q5QGT7 225 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 NOXRED1Q6NXP6 359 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 ALKAL1Q6UXT8 129 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 FRRS1Q6ZNA5 592 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 SCAMP4Q969E2 229 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 SMIM14Q96QK8 99 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 FXYD6Q9H0Q3 95 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 C3orf14Q9HBI5 128 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 CSNK1G1Q9HCP0 422 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 EXTL2Q9UBQ6 330 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 FBXW2Q9UKT8 454 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 COL16A1Q07092 1604 aaPredicted RBP11.13□□□□□ -0.63
VPS33A-201ENST00000267199 AGAP5A6NIR3 686 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 OR1F1O43749 312 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 AKAP8O43823 692 aaKnown RBP11.13□□□□□ -0.63
VPS33A-201ENST00000267199 ADH1CP00326 375 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 HNF1BP35680 557 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 PNLIPRP1P54315 467 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 RCAN2Q14206 197 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 DUS1LQ6P1R4 473 aaKnown RBP11.13□□□□□ -0.63
VPS33A-201ENST00000267199 CLECL1Q8IZS7 167 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 NT5C3BQ969T7 300 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 DPCDQ9BVM2 203 aaPredicted RBP11.13□□□□□ -0.63
VPS33A-201ENST00000267199 C1QTNF7Q9BXJ2 289 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 TTTY10Q9BZA0 68 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 DPAGT1Q9H3H5 408 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 ARNT2Q9HBZ2 717 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 POLR1DQ9Y2S0 133 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 IFT52Q9Y366 437 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 ZNF840PA6NDX5 716 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 CTDSP2O14595 271 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 PDYNP01213 254 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 UQCRC1P31930 480 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 FAUP35544 74 aaKnown RBP11.13□□□□□ -0.63
VPS33A-201ENST00000267199 HNRNPFP52597 415 aaKnown RBP11.13□□□□□ -0.63
VPS33A-201ENST00000267199 CDH11P55287 796 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 SELPLGQ14242 412 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 LHFPL3Q86UP9 236 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 KLHL36Q8N4N3 616 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 OXR1Q8N573 874 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 SLC5A8Q8N695 610 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 PAPD5Q8NDF8 572 aaKnown RBP11.13□□□□□ -0.63
VPS33A-201ENST00000267199 DEDD2Q8WXF8 326 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 ASB12Q8WXK4 309 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 CMTM7Q96FZ5 175 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 BOCQ9BWV1 1114 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 NANSQ9NR45 359 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 FARSBQ9NSD9 589 aaKnown RBP11.13□□□□□ -0.63
VPS33A-201ENST00000267199 GRIP1Q9Y3R0 1128 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 ZNF780BQ9Y6R6 833 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 STRCQ7RTU9 1775 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 CRYZL1O95825 349 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 CBSLP0DN79 551 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 ZNF10P21506 573 aaPredicted RBP11.13□□□□□ -0.63
VPS33A-201ENST00000267199 CBSP35520 551 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 HMGCLP35914 325 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 BDKRB1P46663 353 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 PREPP48147 710 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 CAP1Q01518 475 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 MLLT1Q03111 559 aaPredicted RBP11.13□□□□□ -0.63
VPS33A-201ENST00000267199 ZNF367Q7RTV3 350 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 TAF8Q7Z7C8 310 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 CADM3Q8N126 398 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 RHOXF1Q8NHV9 184 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 CYB5D2Q8WUJ1 264 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 RELTQ969Z4 430 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 SLC35G5Q96KT7 338 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 INPP5KQ9BT40 448 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 EFCAB11Q9BUY7 163 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 IGFLR1Q9H665 355 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 GPN2Q9H9Y4 310 aaPredicted RBP11.13□□□□□ -0.63
VPS33A-201ENST00000267199 FAM120CQ9NX05 1096 aaKnown RBP11.13□□□□□ -0.63
VPS33A-201ENST00000267199 DUS2Q9NX74 493 aaKnown RBP11.13□□□□□ -0.63
VPS33A-201ENST00000267199 B3GNT3Q9Y2A9 372 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 L7N2F9 121 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 HLA-DPB1P04440 258 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 ITGA3P26006 1051 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 ARRB2P32121 409 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 BCL7AQ4VC05 210 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 FAM46CQ5VWP2 391 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 SH2D5Q6ZV89 423 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 ALDH16A1Q8IZ83 802 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 POMGNT2Q8NAT1 580 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 CXorf40BQ96DE9 158 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 LMAN2LQ9H0V9 348 aa11.13□□□□□ -0.63
VPS33A-201ENST00000267199 MICAL3Q7RTP6 2002 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms