RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 GALNT7Q86SF2 657 aa11.65□□□□□ -0.54
SMG6-201ENST00000263073 FRS2Q8WU20 508 aa11.65□□□□□ -0.54
SMG6-201ENST00000263073 S100A16Q96FQ6 103 aaKnown RBP11.65□□□□□ -0.54
SMG6-201ENST00000263073 HCN3Q9P1Z3 774 aa11.65□□□□□ -0.54
SMG6-201ENST00000263073 OR12D1P0DN82 309 aa11.65□□□□□ -0.54
SMG6-201ENST00000263073 KELP23276 732 aa11.65□□□□□ -0.54
SMG6-201ENST00000263073 SSTR4P31391 388 aa11.65□□□□□ -0.54
SMG6-201ENST00000263073 GNG2P59768 71 aa11.65□□□□□ -0.54
SMG6-201ENST00000263073 SLC10A2Q12908 348 aaPredicted RBP11.65□□□□□ -0.54
SMG6-201ENST00000263073 LBX2Q6XYB7 198 aa11.65□□□□□ -0.54
SMG6-201ENST00000263073 TP53INP2Q8IXH6 220 aa11.65□□□□□ -0.54
SMG6-201ENST00000263073 FANK1Q8TC84 345 aa11.65□□□□□ -0.54
SMG6-201ENST00000263073 CD244Q9BZW8 370 aa11.65□□□□□ -0.54
SMG6-201ENST00000263073 DERL2Q9GZP9 239 aa11.65□□□□□ -0.54
SMG6-201ENST00000263073 ZBTB20Q9HC78 741 aaPredicted RBP11.65□□□□□ -0.54
SMG6-201ENST00000263073 TBCCD1Q9NVR7 557 aa11.65□□□□□ -0.54
SMG6-201ENST00000263073 SARDHQ9UL12 918 aa11.65□□□□□ -0.54
SMG6-201ENST00000263073 MYOM1P52179 1685 aa11.65□□□□□ -0.54
SMG6-201ENST00000263073 ANKRD66B4E2M5 251 aa11.65□□□□□ -0.54
SMG6-201ENST00000263073 M0R129 80 aa11.65□□□□□ -0.54
SMG6-201ENST00000263073 B4GAT1O43505 415 aa11.65□□□□□ -0.54
SMG6-201ENST00000263073 SRPRAP08240 638 aaKnown RBP11.65□□□□□ -0.54
SMG6-201ENST00000263073 PRSS56P0CW18 603 aa11.65□□□□□ -0.54
SMG6-201ENST00000263073 PEPDP12955 493 aa11.65□□□□□ -0.54
SMG6-201ENST00000263073 CDKN2DP55273 166 aa11.65□□□□□ -0.54
SMG6-201ENST00000263073 ABRAXAS2Q15018 415 aa11.65□□□□□ -0.54
SMG6-201ENST00000263073 C6orf136Q5SQH8 315 aa11.65□□□□□ -0.54
SMG6-201ENST00000263073 BEND4Q6ZU67 534 aa11.65□□□□□ -0.54
SMG6-201ENST00000263073 DNAJB8Q8NHS0 232 aa11.65□□□□□ -0.54
SMG6-201ENST00000263073 ZNF420Q8TAQ5 688 aaPredicted RBP11.65□□□□□ -0.54
SMG6-201ENST00000263073 ZUFSPQ96AP4 578 aa11.65□□□□□ -0.54
SMG6-201ENST00000263073 SH3YL1Q96HL8 342 aaPredicted RBP11.65□□□□□ -0.54
SMG6-201ENST00000263073 SCLYQ96I15 445 aa11.65□□□□□ -0.54
SMG6-201ENST00000263073 OR10A4Q9H209 315 aa11.65□□□□□ -0.54
SMG6-201ENST00000263073 MMP27Q9H306 513 aa11.65□□□□□ -0.54
SMG6-201ENST00000263073 CARS2Q9HA77 564 aaKnown RBP11.65□□□□□ -0.54
SMG6-201ENST00000263073 MYEF2Q9P2K5 600 aaKnown RBP11.65□□□□□ -0.54
SMG6-201ENST00000263073 MGAT4CQ9UBM8 478 aa11.65□□□□□ -0.54
SMG6-201ENST00000263073 MYH8P13535 1937 aa11.65□□□□□ -0.55
SMG6-201ENST00000263073 IGKV6D-41A0A0C4DH26 115 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 A8MU76 341 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 CAPN5O15484 640 aaPredicted RBP11.64□□□□□ -0.55
SMG6-201ENST00000263073 GTF2F2P13984 249 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 ZNF14P17017 642 aaPredicted RBP11.64□□□□□ -0.55
SMG6-201ENST00000263073 MMP14P50281 582 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 ERVK-21P61565 698 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 EMX2Q04743 252 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 TUBA3CQ13748 450 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 GDPD4Q6W3E5 623 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 SSX6Q7RTT6 188 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 SLC22A8Q8TCC7 542 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 ACSL6Q9UKU0 697 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 HCN4Q9Y3Q4 1203 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 OR6C74A6NCV1 312 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 B4GALT2O60909 372 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 OXSR1O95747 527 aaPredicted RBP11.64□□□□□ -0.55
SMG6-201ENST00000263073 BMP8BP34820 402 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 GXYLT1Q4G148 440 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 C2orf27AQ580R0 203 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 LRRC70Q7Z2Q7 622 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 BMP8AQ7Z5Y6 402 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 OR4E2Q8NGC2 313 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 ZNF778Q96MU6 729 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 CD180Q99467 661 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 SLC38A3Q99624 504 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 NTPCRQ9BSD7 190 aaKnown RBP11.64□□□□□ -0.55
SMG6-201ENST00000263073 TLE6Q9H808 572 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 MTMR10Q9NXD2 777 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 ATXN7L1Q9ULK2 861 aaPredicted RBP11.64□□□□□ -0.55
SMG6-201ENST00000263073 ERVK-11Q9UQG0 969 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 DLGAP4Q9Y2H0 992 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 KNDC1Q76NI1 1749 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 B4DGG1 531 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 ZNF670-ZNF695F2Z2N8 137 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 SLC33A1O00400 549 aaPredicted RBP11.64□□□□□ -0.55
SMG6-201ENST00000263073 WNT9AO14904 365 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 NUPL2O15504 423 aaKnown RBP11.64□□□□□ -0.55
SMG6-201ENST00000263073 MMP20O60882 483 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 STC1P52823 247 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 ZNF45Q02386 682 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 CCL14Q16627 93 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 ZNF181Q2M3W8 571 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 CCM2LQ9NUG4 571 aaPredicted RBP11.64□□□□□ -0.55
SMG6-201ENST00000263073 TMEM9Q9P0T7 183 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.64□□□□□ -0.55
SMG6-201ENST00000263073 SH3PXD2BA1X283 911 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 LRRN3E7EW58 273 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 C11orf98E9PRG8 122 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 RFPL2O75678 378 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 CDC123O75794 336 aaPredicted RBP11.64□□□□□ -0.55
SMG6-201ENST00000263073 CCNOP22674 350 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 TM4SF1P30408 202 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 MAP2K3P46734 347 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 ABHD18Q0P651 414 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 COMMD7Q86VX2 200 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 KLBQ86Z14 1044 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 SH3RF2Q8TEC5 729 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 FCAMRQ8WWV6 532 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 CCM2Q9BSQ5 444 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 LRRN3Q9H3W5 708 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms