RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 ASB8Q9H765 288 aa13.65□□□□□ -0.22
SCARF1-201ENST00000263071 EXOSC4Q9NPD3 245 aaKnown RBP13.65□□□□□ -0.22
SCARF1-201ENST00000263071 LIPT1Q9Y234 373 aa13.65□□□□□ -0.22
SCARF1-201ENST00000263071 PCDHGB1Q9Y5G3 927 aa13.65□□□□□ -0.22
SCARF1-201ENST00000263071 ALG5Q9Y673 324 aa13.65□□□□□ -0.22
SCARF1-201ENST00000263071 UNC80Q8N2C7 3258 aa13.65□□□□□ -0.22
SCARF1-201ENST00000263071 ELOVL7A1L3X0 281 aa13.65□□□□□ -0.22
SCARF1-201ENST00000263071 MBLAC1A4D2B0 266 aaPredicted RBP13.65□□□□□ -0.22
SCARF1-201ENST00000263071 SLC25A14O95258 325 aaPredicted RBP13.65□□□□□ -0.22
SCARF1-201ENST00000263071 CELF2O95319 508 aaKnown RBP13.65□□□□□ -0.22
SCARF1-201ENST00000263071 ISL1P61371 349 aa13.65□□□□□ -0.22
SCARF1-201ENST00000263071 BOP1Q14137 746 aaKnown RBP13.65□□□□□ -0.22
SCARF1-201ENST00000263071 CLLU1Q5K131 121 aa13.65□□□□□ -0.22
SCARF1-201ENST00000263071 CDKL4Q5MAI5 379 aa13.65□□□□□ -0.22
SCARF1-201ENST00000263071 C5orf46Q6UWT4 87 aa13.65□□□□□ -0.22
SCARF1-201ENST00000263071 C2orf69Q8N8R5 385 aa13.65□□□□□ -0.22
SCARF1-201ENST00000263071 PTPN18Q99952 460 aa13.65□□□□□ -0.22
SCARF1-201ENST00000263071 INPP5KQ9BT40 448 aa13.65□□□□□ -0.22
SCARF1-201ENST00000263071 NUSAP1Q9BXS6 441 aaKnown RBP13.65□□□□□ -0.22
SCARF1-201ENST00000263071 FAM124BQ9H5Z6 455 aaPredicted RBP13.65□□□□□ -0.22
SCARF1-201ENST00000263071 MYL12BO14950 172 aa13.64□□□□□ -0.23
SCARF1-201ENST00000263071 MLYCDO95822 493 aa13.64□□□□□ -0.23
SCARF1-201ENST00000263071 PEX11BO96011 259 aa13.64□□□□□ -0.23
SCARF1-201ENST00000263071 RAF1P04049 648 aa13.64□□□□□ -0.23
SCARF1-201ENST00000263071 MYL12AP19105 171 aa13.64□□□□□ -0.23
SCARF1-201ENST00000263071 TUSC3Q13454 348 aa13.64□□□□□ -0.23
SCARF1-201ENST00000263071 BAK1Q16611 211 aa13.64□□□□□ -0.23
SCARF1-201ENST00000263071 ZNF284Q2VY69 593 aa13.64□□□□□ -0.23
SCARF1-201ENST00000263071 RNF219Q5W0B1 726 aaPredicted RBP13.64□□□□□ -0.23
SCARF1-201ENST00000263071 HS6ST3Q8IZP7 471 aa13.64□□□□□ -0.23
SCARF1-201ENST00000263071 C10orf111Q8N326 155 aa13.64□□□□□ -0.23
SCARF1-201ENST00000263071 SETD9Q8NE22 299 aa13.64□□□□□ -0.23
SCARF1-201ENST00000263071 COQ8BQ96D53 544 aa13.64□□□□□ -0.23
SCARF1-201ENST00000263071 SDHCQ99643 169 aaPredicted RBP13.64□□□□□ -0.23
SCARF1-201ENST00000263071 UGT2B28Q9BY64 529 aa13.64□□□□□ -0.23
SCARF1-201ENST00000263071 ZNF768Q9H5H4 540 aaKnown RBP13.64□□□□□ -0.23
SCARF1-201ENST00000263071 MAGEL2Q9UJ55 1249 aa13.64□□□□□ -0.23
SCARF1-201ENST00000263071 CRLS1Q9UJA2 301 aa13.64□□□□□ -0.23
SCARF1-201ENST00000263071 CLCA3PQ9Y6N3 262 aa13.64□□□□□ -0.23
SCARF1-201ENST00000263071 A0A1B0GVM2 712 aa13.64□□□□□ -0.23
SCARF1-201ENST00000263071 FAM234BA2RU67 622 aa13.64□□□□□ -0.23
SCARF1-201ENST00000263071 ALPPP05187 535 aa13.64□□□□□ -0.23
SCARF1-201ENST00000263071 TACR2P21452 398 aa13.64□□□□□ -0.23
SCARF1-201ENST00000263071 LPOP22079 712 aaPredicted RBP13.64□□□□□ -0.23
SCARF1-201ENST00000263071 IGFBP5P24593 272 aa13.64□□□□□ -0.23
SCARF1-201ENST00000263071 CCL23P55773 120 aa13.64□□□□□ -0.23
SCARF1-201ENST00000263071 CSTF1Q05048 431 aaKnown RBP13.64□□□□□ -0.23
SCARF1-201ENST00000263071 ZNF91Q05481 1191 aa13.64□□□□□ -0.23
SCARF1-201ENST00000263071 EXOSC2Q13868 293 aaKnown RBP13.64□□□□□ -0.23
SCARF1-201ENST00000263071 FCRLBQ6BAA4 426 aa13.64□□□□□ -0.23
SCARF1-201ENST00000263071 DOK6Q6PKX4 331 aa13.64□□□□□ -0.23
SCARF1-201ENST00000263071 C9orf62Q8N4C0 152 aa13.64□□□□□ -0.23
SCARF1-201ENST00000263071 AP2M1Q96CW1 435 aa13.64□□□□□ -0.23
SCARF1-201ENST00000263071 IL1RAPQ9NPH3 570 aa13.64□□□□□ -0.23
SCARF1-201ENST00000263071 PDP1Q9P0J1 537 aaPredicted RBP13.64□□□□□ -0.23
SCARF1-201ENST00000263071 ABCD2Q9UBJ2 740 aa13.64□□□□□ -0.23
SCARF1-201ENST00000263071 NAALAD2Q9Y3Q0 740 aa13.64□□□□□ -0.23
SCARF1-201ENST00000263071 AUP1Q9Y679 476 aa13.64□□□□□ -0.23
SCARF1-201ENST00000263071 A0A0C4DFX4 3053 aa13.64□□□□□ -0.23
SCARF1-201ENST00000263071 TRBV23-1A0A0A0MS06 115 aa13.64□□□□□ -0.23
SCARF1-201ENST00000263071 A0A0A6YYJ9 748 aa13.64□□□□□ -0.23
SCARF1-201ENST00000263071 LOC730098B7Z3J9 87 aa13.64□□□□□ -0.23
SCARF1-201ENST00000263071 PER2O15055 1255 aa13.64□□□□□ -0.23
SCARF1-201ENST00000263071 SNAPINO95295 136 aa13.64□□□□□ -0.23
SCARF1-201ENST00000263071 PAPSS2O95340 614 aaPredicted RBP13.64□□□□□ -0.23
SCARF1-201ENST00000263071 GJB5O95377 273 aa13.64□□□□□ -0.23
SCARF1-201ENST00000263071 APOC3P02656 99 aa13.64□□□□□ -0.23
SCARF1-201ENST00000263071 ACSM4P0C7M7 580 aa13.64□□□□□ -0.23
SCARF1-201ENST00000263071 HLA-DPA1P20036 260 aa13.64□□□□□ -0.23
SCARF1-201ENST00000263071 LIPAP38571 399 aa13.64□□□□□ -0.23
SCARF1-201ENST00000263071 SERINC3Q13530 473 aa13.64□□□□□ -0.23
SCARF1-201ENST00000263071 ZMAT1Q5H9K5 638 aa13.64□□□□□ -0.23
SCARF1-201ENST00000263071 PRSS55Q6UWB4 352 aaPredicted RBP13.64□□□□□ -0.23
SCARF1-201ENST00000263071 RNF180Q86T96 592 aa13.64□□□□□ -0.23
SCARF1-201ENST00000263071 CCDC190Q86UF4 302 aa13.64□□□□□ -0.23
SCARF1-201ENST00000263071 LMNTD1Q8N9Z9 388 aa13.64□□□□□ -0.23
SCARF1-201ENST00000263071 CEP76Q8TAP6 659 aa13.64□□□□□ -0.23
SCARF1-201ENST00000263071 SELENOMQ8WWX9 145 aa13.64□□□□□ -0.23
SCARF1-201ENST00000263071 PDXPQ96GD0 296 aa13.64□□□□□ -0.23
SCARF1-201ENST00000263071 RDH12Q96NR8 316 aa13.64□□□□□ -0.23
SCARF1-201ENST00000263071 C11orf54Q9H0W9 315 aaPredicted RBP13.64□□□□□ -0.23
SCARF1-201ENST00000263071 CCNB1IP1Q9NPC3 277 aa13.64□□□□□ -0.23
SCARF1-201ENST00000263071 TRAV19A0A0A6YYK7 116 aa13.63□□□□□ -0.23
SCARF1-201ENST00000263071 TCRBV5S2A0A599 114 aa13.63□□□□□ -0.23
SCARF1-201ENST00000263071 SMIM30A4D0T7 59 aa13.63□□□□□ -0.23
SCARF1-201ENST00000263071 FABP7O15540 132 aa13.63□□□□□ -0.23
SCARF1-201ENST00000263071 VIPP01282 170 aa13.63□□□□□ -0.23
SCARF1-201ENST00000263071 ZNF81P51508 661 aa13.63□□□□□ -0.23
SCARF1-201ENST00000263071 RHOAP61586 193 aa13.63□□□□□ -0.23
SCARF1-201ENST00000263071 C2orf80Q0P641 193 aa13.63□□□□□ -0.23
SCARF1-201ENST00000263071 FAM131AQ6UXB0 335 aa13.63□□□□□ -0.23
SCARF1-201ENST00000263071 TRILQ7L0X0 811 aa13.63□□□□□ -0.23
SCARF1-201ENST00000263071 SPATA19Q7Z5L4 167 aa13.63□□□□□ -0.23
SCARF1-201ENST00000263071 LSRQ86X29 649 aaPredicted RBP13.63□□□□□ -0.23
SCARF1-201ENST00000263071 C8orf33Q9H7E9 229 aaPredicted RBP13.63□□□□□ -0.23
SCARF1-201ENST00000263071 ABCB8Q9NUT2 735 aa13.63□□□□□ -0.23
SCARF1-201ENST00000263071 CD84Q9UIB8 345 aa13.63□□□□□ -0.23
SCARF1-201ENST00000263071 SAMHD1Q9Y3Z3 626 aaKnown RBP13.63□□□□□ -0.23
SCARF1-201ENST00000263071 FKBP7Q9Y680 259 aa13.63□□□□□ -0.23
SCARF1-201ENST00000263071 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms