RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 PTGER1P34995 402 aa12.99□□□□□ -0.33
VMP1-201ENST00000262291 HBA1P69905 142 aa12.99□□□□□ -0.33
VMP1-201ENST00000262291 ITGADQ13349 1161 aa12.99□□□□□ -0.33
VMP1-201ENST00000262291 LCTLQ6UWM7 567 aa12.99□□□□□ -0.33
VMP1-201ENST00000262291 WASH2PQ6VEQ5 465 aa12.99□□□□□ -0.33
VMP1-201ENST00000262291 TMEM179BQ7Z7N9 219 aa12.99□□□□□ -0.33
VMP1-201ENST00000262291 FAM9CQ8IZT9 166 aa12.99□□□□□ -0.33
VMP1-201ENST00000262291 OR8J2Q8NGG1 315 aa12.99□□□□□ -0.33
VMP1-201ENST00000262291 HMGB4Q8WW32 186 aa12.99□□□□□ -0.33
VMP1-201ENST00000262291 STARD8Q92502 1023 aa12.99□□□□□ -0.33
VMP1-201ENST00000262291 CAMK1GQ96NX5 476 aa12.99□□□□□ -0.33
VMP1-201ENST00000262291 ADI1Q9BV57 179 aa12.99□□□□□ -0.33
VMP1-201ENST00000262291 AASDHPPTQ9NRN7 309 aa12.99□□□□□ -0.33
VMP1-201ENST00000262291 PNMA8BQ9ULN7 279 aaPredicted RBP12.99□□□□□ -0.33
VMP1-201ENST00000262291 NDRG2Q9UN36 371 aaKnown RBP12.99□□□□□ -0.33
VMP1-201ENST00000262291 NOX1Q9Y5S8 564 aa12.99□□□□□ -0.33
VMP1-201ENST00000262291 ANKDD1BA6NHY2 528 aa12.98□□□□□ -0.33
VMP1-201ENST00000262291 hCG_2039718K7EN88 272 aa12.98□□□□□ -0.33
VMP1-201ENST00000262291 KCNK5O95279 499 aa12.98□□□□□ -0.33
VMP1-201ENST00000262291 ACADMP11310 421 aa12.98□□□□□ -0.33
VMP1-201ENST00000262291 FCGR1AP12314 374 aa12.98□□□□□ -0.33
VMP1-201ENST00000262291 NR1D2Q14995 579 aa12.98□□□□□ -0.33
VMP1-201ENST00000262291 CCDC85BQ15834 202 aaPredicted RBP12.98□□□□□ -0.33
VMP1-201ENST00000262291 TMTC4Q5T4D3 741 aa12.98□□□□□ -0.33
VMP1-201ENST00000262291 SPRED1Q7Z699 444 aa12.98□□□□□ -0.33
VMP1-201ENST00000262291 CARM1Q86X55 608 aa12.98□□□□□ -0.33
VMP1-201ENST00000262291 PTOV1Q86YD1 416 aa12.98□□□□□ -0.33
VMP1-201ENST00000262291 TDHQ8IZJ6 230 aa12.98□□□□□ -0.33
VMP1-201ENST00000262291 SMRP1Q8NCR6 262 aa12.98□□□□□ -0.33
VMP1-201ENST00000262291 OR1E3Q8WZA6 343 aa12.98□□□□□ -0.33
VMP1-201ENST00000262291 TFAP2CQ92754 450 aa12.98□□□□□ -0.33
VMP1-201ENST00000262291 WDR34Q96EX3 536 aa12.98□□□□□ -0.33
VMP1-201ENST00000262291 RMND5BQ96G75 393 aaPredicted RBP12.98□□□□□ -0.33
VMP1-201ENST00000262291 SIAEQ9HAT2 523 aa12.98□□□□□ -0.33
VMP1-201ENST00000262291 DCAF13Q9NV06 445 aaKnown RBP12.98□□□□□ -0.33
VMP1-201ENST00000262291 FAM120CQ9NX05 1096 aaKnown RBP12.98□□□□□ -0.33
VMP1-201ENST00000262291 SPHK1Q9NYA1 384 aa12.98□□□□□ -0.33
VMP1-201ENST00000262291 ITGB1BP2Q9UKP3 347 aa12.98□□□□□ -0.33
VMP1-201ENST00000262291 FZD4Q9ULV1 537 aa12.98□□□□□ -0.33
VMP1-201ENST00000262291 MYRFQ9Y2G1 1151 aa12.98□□□□□ -0.33
VMP1-201ENST00000262291 TCRBV21S2A2A0A5A6 115 aa12.98□□□□□ -0.33
VMP1-201ENST00000262291 PLPP1O14494 284 aa12.98□□□□□ -0.33
VMP1-201ENST00000262291 SCELO95171 688 aa12.98□□□□□ -0.33
VMP1-201ENST00000262291 ASMTP46597 345 aa12.98□□□□□ -0.33
VMP1-201ENST00000262291 RPS9P46781 194 aaKnown RBP12.98□□□□□ -0.33
VMP1-201ENST00000262291 PLA2G16P53816 162 aa12.98□□□□□ -0.33
VMP1-201ENST00000262291 ABHD18Q0P651 414 aa12.98□□□□□ -0.33
VMP1-201ENST00000262291 GRSF1Q12849 480 aaKnown RBP eCLIP12.98□□□□□ -0.33
VMP1-201ENST00000262291 MERTKQ12866 999 aa12.98□□□□□ -0.33
VMP1-201ENST00000262291 E2F2Q14209 437 aa12.98□□□□□ -0.33
VMP1-201ENST00000262291 ZNF829Q3KNS6 432 aaPredicted RBP12.98□□□□□ -0.33
VMP1-201ENST00000262291 CYP27C1Q4G0S4 372 aa12.98□□□□□ -0.33
VMP1-201ENST00000262291 INTS11Q5TA45 600 aaKnown RBP12.98□□□□□ -0.33
VMP1-201ENST00000262291 GPR107Q5VW38 600 aa12.98□□□□□ -0.33
VMP1-201ENST00000262291 ZZZ3Q8IYH5 903 aa12.98□□□□□ -0.33
VMP1-201ENST00000262291 NAGSQ8N159 534 aa12.98□□□□□ -0.33
VMP1-201ENST00000262291 GOLM1Q8NBJ4 401 aa12.98□□□□□ -0.33
VMP1-201ENST00000262291 TBC1D15Q8TC07 691 aa12.98□□□□□ -0.33
VMP1-201ENST00000262291 REXO5Q96IC2 774 aaKnown RBP12.98□□□□□ -0.33
VMP1-201ENST00000262291 BDH2Q9BUT1 245 aa12.98□□□□□ -0.33
VMP1-201ENST00000262291 UGT2B28Q9BY64 529 aa12.98□□□□□ -0.33
VMP1-201ENST00000262291 REEP4Q9H6H4 257 aa12.98□□□□□ -0.33
VMP1-201ENST00000262291 KCNK12Q9HB15 430 aa12.98□□□□□ -0.33
VMP1-201ENST00000262291 OLAHQ9NV23 265 aa12.98□□□□□ -0.33
VMP1-201ENST00000262291 SNX11Q9Y5W9 270 aa12.98□□□□□ -0.33
VMP1-201ENST00000262291 MTCH2Q9Y6C9 303 aa12.98□□□□□ -0.33
VMP1-201ENST00000262291 IGKV1-8A0A0C4DH67 115 aa12.97□□□□□ -0.33
VMP1-201ENST00000262291 A6NL46 340 aa12.97□□□□□ -0.33
VMP1-201ENST00000262291 ANHXE9PGG2 379 aa12.97□□□□□ -0.33
VMP1-201ENST00000262291 H3BNH8 94 aa12.97□□□□□ -0.33
VMP1-201ENST00000262291 CACNB4O00305 520 aaPredicted RBP12.97□□□□□ -0.33
VMP1-201ENST00000262291 FOXE1O00358 373 aaPredicted RBP12.97□□□□□ -0.33
VMP1-201ENST00000262291 OPN1SWP03999 348 aa12.97□□□□□ -0.33
VMP1-201ENST00000262291 ETFAP13804 333 aa12.97□□□□□ -0.33
VMP1-201ENST00000262291 SOAT1P35610 550 aa12.97□□□□□ -0.33
VMP1-201ENST00000262291 CRATP43155 626 aa12.97□□□□□ -0.33
VMP1-201ENST00000262291 TRPC1P48995 793 aa12.97□□□□□ -0.33
VMP1-201ENST00000262291 BMXP51813 675 aa12.97□□□□□ -0.33
VMP1-201ENST00000262291 PCDH1Q08174 1060 aa12.97□□□□□ -0.33
VMP1-201ENST00000262291 CCNYL2Q5T2Q4 361 aa12.97□□□□□ -0.33
VMP1-201ENST00000262291 SPESP1Q6UW49 350 aa12.97□□□□□ -0.33
VMP1-201ENST00000262291 DGLUCYQ7Z3D6 616 aa12.97□□□□□ -0.33
VMP1-201ENST00000262291 KRT78Q8N1N4 520 aa12.97□□□□□ -0.33
VMP1-201ENST00000262291 PGBD3Q8N328 593 aa12.97□□□□□ -0.33
VMP1-201ENST00000262291 OR52E1Q8NGJ3 308 aa12.97□□□□□ -0.33
VMP1-201ENST00000262291 SETD7Q8WTS6 366 aaKnown RBP12.97□□□□□ -0.33
VMP1-201ENST00000262291 SMPDL3AQ92484 453 aa12.97□□□□□ -0.33
VMP1-201ENST00000262291 PPCDCQ96CD2 204 aa12.97□□□□□ -0.33
VMP1-201ENST00000262291 TPD52L3Q96J77 140 aa12.97□□□□□ -0.33
VMP1-201ENST00000262291 BARD1Q99728 777 aaKnown RBP12.97□□□□□ -0.33
VMP1-201ENST00000262291 VNN3Q9NY84 501 aa12.97□□□□□ -0.33
VMP1-201ENST00000262291 TBC1D29Q9UFV1 150 aa12.97□□□□□ -0.33
VMP1-201ENST00000262291 PCDHB11Q9Y5F2 797 aa12.97□□□□□ -0.33
VMP1-201ENST00000262291 PRKRAO75569 313 aaKnown RBP12.97□□□□□ -0.33
VMP1-201ENST00000262291 FURINP09958 794 aa12.97□□□□□ -0.33
VMP1-201ENST00000262291 ZNF12P17014 697 aa12.97□□□□□ -0.33
VMP1-201ENST00000262291 TCEA1P23193 301 aaKnown RBP12.97□□□□□ -0.33
VMP1-201ENST00000262291 ZNF542PQ5EBM4 170 aa12.97□□□□□ -0.33
VMP1-201ENST00000262291 IRAK1BP1Q5VVH5 260 aa12.97□□□□□ -0.33
VMP1-201ENST00000262291 Q6ZS52 159 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms