RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 ERVK-8P63133 956 aa19.65■□□□□ 0.74
RTCA-201ENST00000260563 HYAL2Q12891 473 aa19.65■□□□□ 0.74
RTCA-201ENST00000260563 COL9A2Q14055 689 aaPredicted RBP19.65■□□□□ 0.74
RTCA-201ENST00000260563 SMU1Q2TAY7 513 aa19.65■□□□□ 0.74
RTCA-201ENST00000260563 TOR1AIP1Q5JTV8 583 aa19.65■□□□□ 0.74
RTCA-201ENST00000260563 CHSY3Q70JA7 882 aa19.65■□□□□ 0.74
RTCA-201ENST00000260563 ARHGEF39Q8N4T4 335 aa19.65■□□□□ 0.74
RTCA-201ENST00000260563 FNDC5Q8NAU1 212 aa19.65■□□□□ 0.74
RTCA-201ENST00000260563 GALNT6Q8NCL4 622 aa19.65■□□□□ 0.74
RTCA-201ENST00000260563 PROKR1Q8TCW9 393 aa19.65■□□□□ 0.74
RTCA-201ENST00000260563 CMTM7Q96FZ5 175 aa19.65■□□□□ 0.74
RTCA-201ENST00000260563 CATSPER2Q96P56 530 aa19.65■□□□□ 0.74
RTCA-201ENST00000260563 SERPINI1Q99574 410 aa19.65■□□□□ 0.74
RTCA-201ENST00000260563 MS4A8Q9BY19 250 aa19.65■□□□□ 0.74
RTCA-201ENST00000260563 NMUR2Q9GZQ4 415 aa19.65■□□□□ 0.74
RTCA-201ENST00000260563 NMRK1Q9NWW6 199 aa19.65■□□□□ 0.74
RTCA-201ENST00000260563 ACSL6Q9UKU0 697 aa19.65■□□□□ 0.74
RTCA-201ENST00000260563 FCHO1O14526 889 aa19.64■□□□□ 0.73
RTCA-201ENST00000260563 SH3BGRLO75368 114 aa19.64■□□□□ 0.73
RTCA-201ENST00000260563 SEC22BO75396 215 aa19.64■□□□□ 0.73
RTCA-201ENST00000260563 TBX6O95947 436 aaPredicted RBP19.64■□□□□ 0.73
RTCA-201ENST00000260563 ALDOCP09972 364 aaKnown RBP19.64■□□□□ 0.73
RTCA-201ENST00000260563 ALAS2P22557 587 aa19.64■□□□□ 0.73
RTCA-201ENST00000260563 PTX3P26022 381 aaPredicted RBP19.64■□□□□ 0.73
RTCA-201ENST00000260563 HNRNPH1P31943 449 aaKnown RBP19.64■□□□□ 0.73
RTCA-201ENST00000260563 RPL38P63173 70 aaKnown RBP19.64■□□□□ 0.73
RTCA-201ENST00000260563 EMX2Q04743 252 aa19.64■□□□□ 0.73
RTCA-201ENST00000260563 RFTN2Q52LD8 501 aaPredicted RBP19.64■□□□□ 0.73
RTCA-201ENST00000260563 SPATA19Q7Z5L4 167 aa19.64■□□□□ 0.73
RTCA-201ENST00000260563 ZFAND4Q86XD8 727 aa19.64■□□□□ 0.73
RTCA-201ENST00000260563 SLC38A9Q8NBW4 561 aa19.64■□□□□ 0.73
RTCA-201ENST00000260563 GATA6Q92908 595 aa19.64■□□□□ 0.73
RTCA-201ENST00000260563 GAL3ST3Q96A11 431 aa19.64■□□□□ 0.73
RTCA-201ENST00000260563 APIPQ96GX9 242 aa19.64■□□□□ 0.73
RTCA-201ENST00000260563 MARK4Q96L34 752 aa19.64■□□□□ 0.73
RTCA-201ENST00000260563 LRFN5Q96NI6 719 aa19.64■□□□□ 0.73
RTCA-201ENST00000260563 REXO4Q9GZR2 422 aaKnown RBP19.64■□□□□ 0.73
RTCA-201ENST00000260563 MYLK2Q9H1R3 596 aa19.64■□□□□ 0.73
RTCA-201ENST00000260563 OR51B5Q9H339 312 aa19.64■□□□□ 0.73
RTCA-201ENST00000260563 G3BP2Q9UN86 482 aaKnown RBP19.64■□□□□ 0.73
RTCA-201ENST00000260563 NCOR2Q9Y618 2525 aa19.63■□□□□ 0.73
RTCA-201ENST00000260563 TEX51A0A1B0GUA7 166 aa19.63■□□□□ 0.73
RTCA-201ENST00000260563 LRIT2A6NDA9 550 aa19.63■□□□□ 0.73
RTCA-201ENST00000260563 MED26O95402 600 aa19.63■□□□□ 0.73
RTCA-201ENST00000260563 ZNF888P0CJ79 500 aaPredicted RBP19.63■□□□□ 0.73
RTCA-201ENST00000260563 RORAP35398 523 aa19.63■□□□□ 0.73
RTCA-201ENST00000260563 MAD2L1Q13257 205 aaPredicted RBP19.63■□□□□ 0.73
RTCA-201ENST00000260563 CUL3Q13618 768 aa19.63■□□□□ 0.73
RTCA-201ENST00000260563 FAM53BQ14153 422 aa19.63■□□□□ 0.73
RTCA-201ENST00000260563 MAP7Q14244 749 aa19.63■□□□□ 0.73
RTCA-201ENST00000260563 HERC3Q15034 1050 aa19.63■□□□□ 0.73
RTCA-201ENST00000260563 KIAA0040Q15053 153 aa19.63■□□□□ 0.73
RTCA-201ENST00000260563 ADPRMQ3LIE5 342 aa19.63■□□□□ 0.73
RTCA-201ENST00000260563 C1orf189Q5VU69 101 aa19.63■□□□□ 0.73
RTCA-201ENST00000260563 C6orf15Q6UXA7 325 aaPredicted RBP19.63■□□□□ 0.73
RTCA-201ENST00000260563 DSELQ8IZU8 1212 aa19.63■□□□□ 0.73
RTCA-201ENST00000260563 FITM2Q8N6M3 262 aa19.63■□□□□ 0.73
RTCA-201ENST00000260563 MS4A6EQ96DS6 147 aa19.63■□□□□ 0.73
RTCA-201ENST00000260563 MVB12AQ96EY5 273 aa19.63■□□□□ 0.73
RTCA-201ENST00000260563 METTL2AQ96IZ6 378 aaKnown RBP19.63■□□□□ 0.73
RTCA-201ENST00000260563 CENPKQ9BS16 269 aa19.63■□□□□ 0.73
RTCA-201ENST00000260563 C1orf50Q9BV19 199 aa19.63■□□□□ 0.73
RTCA-201ENST00000260563 SPRY4Q9C004 299 aa19.63■□□□□ 0.73
RTCA-201ENST00000260563 KLHL31Q9H511 634 aa19.63■□□□□ 0.73
RTCA-201ENST00000260563 SAR1AQ9NR31 198 aa19.63■□□□□ 0.73
RTCA-201ENST00000260563 MRPS2Q9Y399 296 aaKnown RBP19.63■□□□□ 0.73
RTCA-201ENST00000260563 SLC22A7Q9Y694 548 aa19.63■□□□□ 0.73
RTCA-201ENST00000260563 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.62■□□□□ 0.73
RTCA-201ENST00000260563 KLK3P07288 261 aaPredicted RBP19.62■□□□□ 0.73
RTCA-201ENST00000260563 IL1RNP18510 177 aa19.62■□□□□ 0.73
RTCA-201ENST00000260563 PCBP4P57723 403 aaKnown RBP19.62■□□□□ 0.73
RTCA-201ENST00000260563 TGM3Q08188 693 aa19.62■□□□□ 0.73
RTCA-201ENST00000260563 TBL3Q12788 808 aaKnown RBP19.62■□□□□ 0.73
RTCA-201ENST00000260563 KHDRBS2Q5VWX1 349 aaKnown RBP19.62■□□□□ 0.73
RTCA-201ENST00000260563 TRIM40Q6P9F5 258 aa19.62■□□□□ 0.73
RTCA-201ENST00000260563 TRPM8Q7Z2W7 1104 aa19.62■□□□□ 0.73
RTCA-201ENST00000260563 NLGN4XQ8N0W4 816 aa19.62■□□□□ 0.73
RTCA-201ENST00000260563 ESX1Q8N693 406 aa19.62■□□□□ 0.73
RTCA-201ENST00000260563 METTL27Q8N6F8 245 aaPredicted RBP19.62■□□□□ 0.73
RTCA-201ENST00000260563 NLGN4YQ8NFZ3 816 aaPredicted RBP19.62■□□□□ 0.73
RTCA-201ENST00000260563 UTP15Q8TED0 518 aaKnown RBP19.62■□□□□ 0.73
RTCA-201ENST00000260563 ERP27Q96DN0 273 aa19.62■□□□□ 0.73
RTCA-201ENST00000260563 GBP5Q96PP8 586 aa19.62■□□□□ 0.73
RTCA-201ENST00000260563 AICDAQ9GZX7 198 aa19.62■□□□□ 0.73
RTCA-201ENST00000260563 CCDC86Q9H6F5 360 aaKnown RBP19.62■□□□□ 0.73
RTCA-201ENST00000260563 ANKHQ9HCJ1 492 aa19.62■□□□□ 0.73
RTCA-201ENST00000260563 TMED5Q9Y3A6 229 aa19.62■□□□□ 0.73
RTCA-201ENST00000260563 SEC16AO15027 2179 aa19.62■□□□□ 0.73
RTCA-201ENST00000260563 MEN1O00255 615 aa19.61■□□□□ 0.73
RTCA-201ENST00000260563 ERI3O43414 337 aaKnown RBP19.61■□□□□ 0.73
RTCA-201ENST00000260563 RAD1O60671 282 aa19.61■□□□□ 0.73
RTCA-201ENST00000260563 CCNYL3P0C7X3 344 aa19.61■□□□□ 0.73
RTCA-201ENST00000260563 LIPCP11150 499 aa19.61■□□□□ 0.73
RTCA-201ENST00000260563 ALOX12P18054 663 aa19.61■□□□□ 0.73
RTCA-201ENST00000260563 AGXTP21549 392 aa19.61■□□□□ 0.73
RTCA-201ENST00000260563 AVPR1BP47901 424 aa19.61■□□□□ 0.73
RTCA-201ENST00000260563 SKP1P63208 163 aa19.61■□□□□ 0.73
RTCA-201ENST00000260563 ABHD18Q0P651 414 aa19.61■□□□□ 0.73
RTCA-201ENST00000260563 UBAP2LQ14157 1087 aaKnown RBP19.61■□□□□ 0.73
RTCA-201ENST00000260563 SPIN4Q56A73 249 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms