RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 TMEM145Q8NBT3 493 aa14.03□□□□□ -0.16
TRAFD1-201ENST00000257604 UCN3Q969E3 161 aa14.03□□□□□ -0.16
TRAFD1-201ENST00000257604 ABCG2Q9UNQ0 655 aa14.03□□□□□ -0.16
TRAFD1-201ENST00000257604 CKAP5Q14008 2032 aa14.03□□□□□ -0.16
TRAFD1-201ENST00000257604 CABIN1Q9Y6J0 2220 aa14.03□□□□□ -0.16
TRAFD1-201ENST00000257604 SLC16A5O15375 505 aa14.03□□□□□ -0.16
TRAFD1-201ENST00000257604 DNTTP04053 509 aa14.03□□□□□ -0.16
TRAFD1-201ENST00000257604 THRBP10828 461 aa14.03□□□□□ -0.16
TRAFD1-201ENST00000257604 POU2F1P14859 743 aa14.03□□□□□ -0.16
TRAFD1-201ENST00000257604 FMO3P31513 532 aa14.03□□□□□ -0.16
TRAFD1-201ENST00000257604 FGL2Q14314 439 aa14.03□□□□□ -0.16
TRAFD1-201ENST00000257604 EIF4HQ15056 248 aaKnown RBP14.03□□□□□ -0.16
TRAFD1-201ENST00000257604 SKIV2LQ15477 1246 aaKnown RBP14.03□□□□□ -0.16
TRAFD1-201ENST00000257604 GRHL2Q6ISB3 625 aa14.03□□□□□ -0.16
TRAFD1-201ENST00000257604 SLCO6A1Q86UG4 719 aa14.03□□□□□ -0.16
TRAFD1-201ENST00000257604 FAM129CQ86XR2 697 aa14.03□□□□□ -0.16
TRAFD1-201ENST00000257604 PTRH1Q86Y79 214 aaKnown RBP14.03□□□□□ -0.16
TRAFD1-201ENST00000257604 PLPP6Q8IY26 295 aa14.03□□□□□ -0.16
TRAFD1-201ENST00000257604 NRBF2Q96F24 287 aa14.03□□□□□ -0.16
TRAFD1-201ENST00000257604 FCRL4Q96PJ5 515 aa14.03□□□□□ -0.16
TRAFD1-201ENST00000257604 VPS35Q96QK1 796 aa14.03□□□□□ -0.16
TRAFD1-201ENST00000257604 POU2F3Q9UKI9 436 aa14.03□□□□□ -0.16
TRAFD1-201ENST00000257604 SOBPA7XYQ1 873 aa14.02□□□□□ -0.16
TRAFD1-201ENST00000257604 SEC14L2O76054 403 aa14.02□□□□□ -0.16
TRAFD1-201ENST00000257604 KLF8O95600 359 aaPredicted RBP14.02□□□□□ -0.16
TRAFD1-201ENST00000257604 LAMP2P13473 410 aa14.02□□□□□ -0.16
TRAFD1-201ENST00000257604 CRHBPP24387 322 aa14.02□□□□□ -0.16
TRAFD1-201ENST00000257604 HPCAL1P37235 193 aa14.02□□□□□ -0.16
TRAFD1-201ENST00000257604 HBA1P69905 142 aa14.02□□□□□ -0.16
TRAFD1-201ENST00000257604 IFITM3Q01628 133 aa14.02□□□□□ -0.16
TRAFD1-201ENST00000257604 CTU2Q2VPK5 515 aaKnown RBP14.02□□□□□ -0.16
TRAFD1-201ENST00000257604 ANKRD54Q6NXT1 300 aa14.02□□□□□ -0.16
TRAFD1-201ENST00000257604 HORMAD1Q86X24 394 aa14.02□□□□□ -0.16
TRAFD1-201ENST00000257604 NDNFQ8TB73 568 aa14.02□□□□□ -0.16
TRAFD1-201ENST00000257604 TSACCQ96A04 125 aaPredicted RBP14.02□□□□□ -0.16
TRAFD1-201ENST00000257604 PPCDCQ96CD2 204 aa14.02□□□□□ -0.16
TRAFD1-201ENST00000257604 YIPF4Q9BSR8 244 aa14.02□□□□□ -0.16
TRAFD1-201ENST00000257604 SIAEQ9HAT2 523 aa14.02□□□□□ -0.16
TRAFD1-201ENST00000257604 RASSF1Q9NS23 344 aa14.02□□□□□ -0.16
TRAFD1-201ENST00000257604 GDE1Q9NZC3 331 aa14.02□□□□□ -0.16
TRAFD1-201ENST00000257604 THAP10Q9P2Z0 257 aaPredicted RBP14.02□□□□□ -0.16
TRAFD1-201ENST00000257604 ZNF229Q9UJW7 825 aa14.02□□□□□ -0.16
TRAFD1-201ENST00000257604 SNX11Q9Y5W9 270 aa14.02□□□□□ -0.16
TRAFD1-201ENST00000257604 DOCK8Q8NF50 2099 aa14.02□□□□□ -0.17
TRAFD1-201ENST00000257604 POM121BA6NF01 834 aa14.02□□□□□ -0.17
TRAFD1-201ENST00000257604 ERAL1O75616 437 aaKnown RBP14.02□□□□□ -0.17
TRAFD1-201ENST00000257604 CPNE6O95741 557 aa14.02□□□□□ -0.17
TRAFD1-201ENST00000257604 HTR1AP08908 422 aa14.02□□□□□ -0.17
TRAFD1-201ENST00000257604 HOXB2P14652 356 aa14.02□□□□□ -0.17
TRAFD1-201ENST00000257604 TMBIM6P55061 237 aa14.02□□□□□ -0.17
TRAFD1-201ENST00000257604 RAE1P78406 368 aaKnown RBP14.02□□□□□ -0.17
TRAFD1-201ENST00000257604 OCA2Q04671 838 aa14.02□□□□□ -0.17
TRAFD1-201ENST00000257604 CCDC85BQ15834 202 aaPredicted RBP14.02□□□□□ -0.17
TRAFD1-201ENST00000257604 DPY19L1Q2PZI1 675 aa14.02□□□□□ -0.17
TRAFD1-201ENST00000257604 AGBL4Q5VU57 503 aa14.02□□□□□ -0.17
TRAFD1-201ENST00000257604 NUDT18Q6ZVK8 323 aa14.02□□□□□ -0.17
TRAFD1-201ENST00000257604 THAP5Q7Z6K1 395 aa14.02□□□□□ -0.17
TRAFD1-201ENST00000257604 C11orf74Q86VG3 221 aa14.02□□□□□ -0.17
TRAFD1-201ENST00000257604 NRSN1Q8IZ57 195 aa14.02□□□□□ -0.17
TRAFD1-201ENST00000257604 OR56A3Q8NH54 315 aa14.02□□□□□ -0.17
TRAFD1-201ENST00000257604 RAB8BQ92930 207 aa14.02□□□□□ -0.17
TRAFD1-201ENST00000257604 SH3YL1Q96HL8 342 aaPredicted RBP14.02□□□□□ -0.17
TRAFD1-201ENST00000257604 CPPED1Q9BRF8 314 aaPredicted RBP14.02□□□□□ -0.17
TRAFD1-201ENST00000257604 SPATA7Q9P0W8 599 aa14.02□□□□□ -0.17
TRAFD1-201ENST00000257604 NDRG2Q9UN36 371 aaKnown RBP14.02□□□□□ -0.17
TRAFD1-201ENST00000257604 TESMINQ9Y4I5 508 aa14.02□□□□□ -0.17
TRAFD1-201ENST00000257604 CCDC88CQ9P219 2028 aa14.02□□□□□ -0.17
TRAFD1-201ENST00000257604 A0A096LPI6 279 aa14.02□□□□□ -0.17
TRAFD1-201ENST00000257604 ABCB7O75027 752 aa14.02□□□□□ -0.17
TRAFD1-201ENST00000257604 ASGR2P07307 311 aa14.02□□□□□ -0.17
TRAFD1-201ENST00000257604 NAT1P18440 290 aa14.02□□□□□ -0.17
TRAFD1-201ENST00000257604 SPDYE7PQ495Y7 208 aa14.02□□□□□ -0.17
TRAFD1-201ENST00000257604 SDE2Q6IQ49 451 aa14.02□□□□□ -0.17
TRAFD1-201ENST00000257604 C8orf59Q8N0T1 100 aaPredicted RBP14.02□□□□□ -0.17
TRAFD1-201ENST00000257604 CADM3Q8N126 398 aa14.02□□□□□ -0.17
TRAFD1-201ENST00000257604 DEFB119Q8N690 84 aa14.02□□□□□ -0.17
TRAFD1-201ENST00000257604 ATG16L2Q8NAA4 619 aa14.02□□□□□ -0.17
TRAFD1-201ENST00000257604 OR2L2Q8NH16 312 aa14.02□□□□□ -0.17
TRAFD1-201ENST00000257604 CCL4L1Q8NHW4 92 aa14.02□□□□□ -0.17
TRAFD1-201ENST00000257604 RAB2BQ8WUD1 216 aa14.02□□□□□ -0.17
TRAFD1-201ENST00000257604 RPL3LQ92901 407 aaKnown RBP14.02□□□□□ -0.17
TRAFD1-201ENST00000257604 ALPK1Q96QP1 1244 aa14.02□□□□□ -0.17
TRAFD1-201ENST00000257604 KIF17Q9P2E2 1029 aa14.02□□□□□ -0.17
TRAFD1-201ENST00000257604 RHCGQ9UBD6 479 aa14.02□□□□□ -0.17
TRAFD1-201ENST00000257604 PLXNB3Q9ULL4 1909 aa14.01□□□□□ -0.17
TRAFD1-201ENST00000257604 UPK1AO00322 258 aa14.01□□□□□ -0.17
TRAFD1-201ENST00000257604 C8orf89P0DMQ9 161 aa14.01□□□□□ -0.17
TRAFD1-201ENST00000257604 TIA1P31483 386 aaKnown RBP eCLIP14.01□□□□□ -0.173e-12■□□□□ 10.8
TRAFD1-201ENST00000257604 MADCAM1Q13477 382 aa14.01□□□□□ -0.17
TRAFD1-201ENST00000257604 DAG1Q14118 895 aa14.01□□□□□ -0.17
TRAFD1-201ENST00000257604 NXPE4Q6UWF7 544 aa14.01□□□□□ -0.17
TRAFD1-201ENST00000257604 ENPP7Q6UWV6 458 aa14.01□□□□□ -0.17
TRAFD1-201ENST00000257604 C17orf62Q9BQA9 187 aa14.01□□□□□ -0.17
TRAFD1-201ENST00000257604 ABCB10Q9NRK6 738 aa14.01□□□□□ -0.17
TRAFD1-201ENST00000257604 TSPAN11A1L157 253 aa14.01□□□□□ -0.17
TRAFD1-201ENST00000257604 LILRB5O75023 590 aa14.01□□□□□ -0.17
TRAFD1-201ENST00000257604 OXSR1O95747 527 aaPredicted RBP14.01□□□□□ -0.17
TRAFD1-201ENST00000257604 ALPLP05186 524 aa14.01□□□□□ -0.17
TRAFD1-201ENST00000257604 TPTEP56180 551 aa14.01□□□□□ -0.17
TRAFD1-201ENST00000257604 RAB8AP61006 207 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms