RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 C1orf189Q5VU69 101 aa18.02■□□□□ 0.48
SMARCC1-201ENST00000254480 DPH2Q9BQC3 489 aaPredicted RBP18.02■□□□□ 0.48
SMARCC1-201ENST00000254480 WACQ9BTA9 647 aa18.02■□□□□ 0.48
SMARCC1-201ENST00000254480 PAK6Q9NQU5 681 aaPredicted RBP18.02■□□□□ 0.48
SMARCC1-201ENST00000254480 GPR32O75388 356 aa18.02■□□□□ 0.48
SMARCC1-201ENST00000254480 NTHL1P78549 312 aa18.02■□□□□ 0.48
SMARCC1-201ENST00000254480 TPRG1LQ5T0D9 272 aa18.02■□□□□ 0.48
SMARCC1-201ENST00000254480 SWT1Q5T5J6 900 aaKnown RBP18.02■□□□□ 0.48
SMARCC1-201ENST00000254480 FCGR1BQ92637 280 aa18.02■□□□□ 0.48
SMARCC1-201ENST00000254480 MCHR1Q99705 422 aa18.02■□□□□ 0.48
SMARCC1-201ENST00000254480 ITPAQ9BY32 194 aa18.02■□□□□ 0.48
SMARCC1-201ENST00000254480 TMEM59LQ9UK28 342 aa18.02■□□□□ 0.48
SMARCC1-201ENST00000254480 MGAT4AQ9UM21 535 aa18.02■□□□□ 0.48
SMARCC1-201ENST00000254480 TMED5Q9Y3A6 229 aa18.02■□□□□ 0.48
SMARCC1-201ENST00000254480 MAU2Q9Y6X3 613 aa18.02■□□□□ 0.48
SMARCC1-201ENST00000254480 CLEC3AO75596 197 aa18.02■□□□□ 0.48
SMARCC1-201ENST00000254480 KDM4BO94953 1096 aa18.02■□□□□ 0.48
SMARCC1-201ENST00000254480 FGF3P11487 239 aaPredicted RBP18.02■□□□□ 0.48
SMARCC1-201ENST00000254480 OR56A1Q8NGH5 318 aa18.02■□□□□ 0.48
SMARCC1-201ENST00000254480 CEP76Q8TAP6 659 aa18.02■□□□□ 0.48
SMARCC1-201ENST00000254480 C13orf42A0A1B0GVH6 325 aa18.02■□□□□ 0.47
SMARCC1-201ENST00000254480 ZNF670-ZNF695F2Z2N8 137 aa18.02■□□□□ 0.47
SMARCC1-201ENST00000254480 CKMT1AP12532 417 aa18.02■□□□□ 0.47
SMARCC1-201ENST00000254480 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.02■□□□□ 0.473e-9■■□□□ 12.7
SMARCC1-201ENST00000254480 CCDC36Q8IYA8 594 aa18.02■□□□□ 0.47
SMARCC1-201ENST00000254480 ZNF317Q96PQ6 595 aaPredicted RBP18.02■□□□□ 0.47
SMARCC1-201ENST00000254480 EPYCQ99645 322 aa18.02■□□□□ 0.47
SMARCC1-201ENST00000254480 ASPNQ9BXN1 380 aa18.02■□□□□ 0.47
SMARCC1-201ENST00000254480 A0A1W2PQU0 124 aa18.02■□□□□ 0.47
SMARCC1-201ENST00000254480 ABLIM1O14639 778 aa18.02■□□□□ 0.47
SMARCC1-201ENST00000254480 HCRTR2O43614 444 aa18.02■□□□□ 0.47
SMARCC1-201ENST00000254480 AGR2O95994 175 aa18.02■□□□□ 0.47
SMARCC1-201ENST00000254480 EMX2Q04743 252 aa18.02■□□□□ 0.47
SMARCC1-201ENST00000254480 TOMM5Q8N4H5 51 aa18.02■□□□□ 0.47
SMARCC1-201ENST00000254480 TRPV4Q9HBA0 871 aa18.02■□□□□ 0.47
SMARCC1-201ENST00000254480 ACTR3BQ9P1U1 418 aa18.02■□□□□ 0.47
SMARCC1-201ENST00000254480 TMEM107Q6UX40 140 aa18.01■□□□□ 0.47
SMARCC1-201ENST00000254480 OR51G2Q8NGK0 314 aa18.01■□□□□ 0.47
SMARCC1-201ENST00000254480 F2RL3Q96RI0 385 aa18.01■□□□□ 0.47
SMARCC1-201ENST00000254480 MND1Q9BWT6 205 aa18.01■□□□□ 0.47
SMARCC1-201ENST00000254480 OR2AT4A6NND4 320 aa18.01■□□□□ 0.47
SMARCC1-201ENST00000254480 DFNA5O60443 496 aa18.01■□□□□ 0.47
SMARCC1-201ENST00000254480 RHDQ02161 417 aa18.01■□□□□ 0.47
SMARCC1-201ENST00000254480 UGT8Q16880 541 aa18.01■□□□□ 0.47
SMARCC1-201ENST00000254480 GLYATL1Q969I3 302 aa18.01■□□□□ 0.47
SMARCC1-201ENST00000254480 RAD9AQ99638 391 aa18.01■□□□□ 0.47
SMARCC1-201ENST00000254480 MTG2Q9H4K7 406 aa18.01■□□□□ 0.47
SMARCC1-201ENST00000254480 PHLPP1O60346 1717 aa18.01■□□□□ 0.47
SMARCC1-201ENST00000254480 LSM1O15116 133 aaKnown RBP18.01■□□□□ 0.47
SMARCC1-201ENST00000254480 RNGTTO60942 597 aaKnown RBP18.01■□□□□ 0.47
SMARCC1-201ENST00000254480 GRK5P34947 590 aa18.01■□□□□ 0.47
SMARCC1-201ENST00000254480 MFSD2AQ8NA29 543 aa18.01■□□□□ 0.47
SMARCC1-201ENST00000254480 OR6N2Q8NGY6 317 aa18.01■□□□□ 0.47
SMARCC1-201ENST00000254480 ORAI3Q9BRQ5 295 aa18.01■□□□□ 0.47
SMARCC1-201ENST00000254480 PRTFDC1Q9NRG1 225 aa18.01■□□□□ 0.47
SMARCC1-201ENST00000254480 FAM120CQ9NX05 1096 aaKnown RBP18.01■□□□□ 0.47
SMARCC1-201ENST00000254480 LAMP5Q9UJQ1 280 aa18.01■□□□□ 0.47
SMARCC1-201ENST00000254480 CAPN14A8MX76 684 aa18.01■□□□□ 0.47
SMARCC1-201ENST00000254480 CAPN5O15484 640 aaPredicted RBP18.01■□□□□ 0.47
SMARCC1-201ENST00000254480 TSPAN9O75954 239 aa18.01■□□□□ 0.47
SMARCC1-201ENST00000254480 AHSA1O95433 338 aa18.01■□□□□ 0.47
SMARCC1-201ENST00000254480 SLAMF1Q13291 335 aa18.01■□□□□ 0.47
SMARCC1-201ENST00000254480 TMEM40Q8WWA1 233 aa18.01■□□□□ 0.47
SMARCC1-201ENST00000254480 MS4A12Q9NXJ0 267 aa18.01■□□□□ 0.47
SMARCC1-201ENST00000254480 SPARCP09486 303 aa18.01■□□□□ 0.47
SMARCC1-201ENST00000254480 ACRV1P26436 265 aa18.01■□□□□ 0.47
SMARCC1-201ENST00000254480 CBLBQ13191 982 aa18.01■□□□□ 0.47
SMARCC1-201ENST00000254480 ADGRD2Q7Z7M1 963 aa18.01■□□□□ 0.47
SMARCC1-201ENST00000254480 TSPAN33Q86UF1 283 aa18.01■□□□□ 0.47
SMARCC1-201ENST00000254480 GPALPP1Q8IXQ4 340 aa18.01■□□□□ 0.47
SMARCC1-201ENST00000254480 FANK1Q8TC84 345 aa18.01■□□□□ 0.47
SMARCC1-201ENST00000254480 SEZ6LQ9BYH1 1024 aa18.01■□□□□ 0.47
SMARCC1-201ENST00000254480 ACSL6Q9UKU0 697 aa18.01■□□□□ 0.47
SMARCC1-201ENST00000254480 CHP2O43745 196 aa18■□□□□ 0.47
SMARCC1-201ENST00000254480 RFPL1O75677 317 aa18■□□□□ 0.47
SMARCC1-201ENST00000254480 GSTM3P21266 225 aa18■□□□□ 0.47
SMARCC1-201ENST00000254480 SLC6A4P31645 630 aa18■□□□□ 0.47
SMARCC1-201ENST00000254480 MAGEA11P43364 429 aa18■□□□□ 0.47
SMARCC1-201ENST00000254480 APLP1P51693 650 aa18■□□□□ 0.47
SMARCC1-201ENST00000254480 LPAL2Q16609 132 aa18■□□□□ 0.47
SMARCC1-201ENST00000254480 ANKDD1AQ495B1 522 aa18■□□□□ 0.47
SMARCC1-201ENST00000254480 C12orf40Q86WS4 652 aa18■□□□□ 0.47
SMARCC1-201ENST00000254480 OR4K14Q8NGD5 310 aa18■□□□□ 0.47
SMARCC1-201ENST00000254480 TRIM43Q96BQ3 446 aaPredicted RBP18■□□□□ 0.47
SMARCC1-201ENST00000254480 SOX30O94993 753 aa18■□□□□ 0.47
SMARCC1-201ENST00000254480 C6orf136Q5SQH8 315 aa18■□□□□ 0.47
SMARCC1-201ENST00000254480 OR51A7Q8NH64 312 aa18■□□□□ 0.47
SMARCC1-201ENST00000254480 CNIH3Q8TBE1 160 aa18■□□□□ 0.47
SMARCC1-201ENST00000254480 KCNJ9Q92806 393 aa18■□□□□ 0.47
SMARCC1-201ENST00000254480 REEP4Q9H6H4 257 aa18■□□□□ 0.47
SMARCC1-201ENST00000254480 RPF2Q9H7B2 306 aaKnown RBP18■□□□□ 0.47
SMARCC1-201ENST00000254480 PCDHGB5Q9Y5G0 923 aa18■□□□□ 0.47
SMARCC1-201ENST00000254480 PLOD2O00469 737 aa18■□□□□ 0.47
SMARCC1-201ENST00000254480 STC2O76061 302 aa18■□□□□ 0.47
SMARCC1-201ENST00000254480 IQCF3P0C7M6 154 aa18■□□□□ 0.47
SMARCC1-201ENST00000254480 NANOGP8Q6NSW7 305 aa18■□□□□ 0.47
SMARCC1-201ENST00000254480 OR5T2Q8NGG2 359 aa18■□□□□ 0.47
SMARCC1-201ENST00000254480 SLC6A15Q9H2J7 730 aa18■□□□□ 0.47
SMARCC1-201ENST00000254480 ADAMTS10Q9H324 1103 aa18■□□□□ 0.47
SMARCC1-201ENST00000254480 NANOGQ9H9S0 305 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms