RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 ZNF304Q9HCX3 659 aa13.37□□□□□ -0.27
VPS25-201ENST00000253794 SLCO1B3Q9NPD5 702 aa13.37□□□□□ -0.27
VPS25-201ENST00000253794 PNPOQ9NVS9 261 aa13.37□□□□□ -0.27
VPS25-201ENST00000253794 AHSPQ9NZD4 102 aa13.37□□□□□ -0.27
VPS25-201ENST00000253794 PADI1Q9ULC6 663 aa13.37□□□□□ -0.27
VPS25-201ENST00000253794 SLC12A4Q9UP95 1085 aa13.37□□□□□ -0.27
VPS25-201ENST00000253794 NAALAD2Q9Y3Q0 740 aa13.37□□□□□ -0.27
VPS25-201ENST00000253794 MAP4K5Q9Y4K4 846 aa13.37□□□□□ -0.27
VPS25-201ENST00000253794 ZNF195O14628 629 aa13.36□□□□□ -0.27
VPS25-201ENST00000253794 HDAC3O15379 428 aa13.36□□□□□ -0.27
VPS25-201ENST00000253794 RGS14O43566 566 aa13.36□□□□□ -0.27
VPS25-201ENST00000253794 EDF1O60869 148 aaKnown RBP13.36□□□□□ -0.27
VPS25-201ENST00000253794 RAB40ALP0C0E4 278 aa13.36□□□□□ -0.27
VPS25-201ENST00000253794 PRR35P0CG20 571 aa13.36□□□□□ -0.27
VPS25-201ENST00000253794 ACPPP15309 386 aa13.36□□□□□ -0.27
VPS25-201ENST00000253794 ALOX15P16050 662 aaPredicted RBP13.36□□□□□ -0.27
VPS25-201ENST00000253794 AGXTP21549 392 aa13.36□□□□□ -0.27
VPS25-201ENST00000253794 ALAS2P22557 587 aa13.36□□□□□ -0.27
VPS25-201ENST00000253794 ATP5A1P25705 553 aaKnown RBP13.36□□□□□ -0.27
VPS25-201ENST00000253794 RAP1GDS1P52306 607 aa13.36□□□□□ -0.27
VPS25-201ENST00000253794 PLA2G16P53816 162 aa13.36□□□□□ -0.27
VPS25-201ENST00000253794 PCBP4P57723 403 aaKnown RBP13.36□□□□□ -0.27
VPS25-201ENST00000253794 HMGCS1Q01581 520 aa13.36□□□□□ -0.27
VPS25-201ENST00000253794 BTKQ06187 659 aa13.36□□□□□ -0.27
VPS25-201ENST00000253794 KIAA0040Q15053 153 aa13.36□□□□□ -0.27
VPS25-201ENST00000253794 SMU1Q2TAY7 513 aa13.36□□□□□ -0.27
VPS25-201ENST00000253794 AP5B1Q2VPB7 878 aa13.36□□□□□ -0.27
VPS25-201ENST00000253794 SPIN4Q56A73 249 aa13.36□□□□□ -0.27
VPS25-201ENST00000253794 MRM1Q6IN84 353 aaKnown RBP13.36□□□□□ -0.27
VPS25-201ENST00000253794 MRPL14Q6P1L8 145 aaKnown RBP13.36□□□□□ -0.27
VPS25-201ENST00000253794 FAM198BQ6UWH4 519 aa13.36□□□□□ -0.27
VPS25-201ENST00000253794 PAGE2Q7Z2X7 111 aa13.36□□□□□ -0.27
VPS25-201ENST00000253794 NUDT13Q86X67 352 aa13.36□□□□□ -0.27
VPS25-201ENST00000253794 ZFAND4Q86XD8 727 aa13.36□□□□□ -0.27
VPS25-201ENST00000253794 DTWD1Q8N5C7 304 aa13.36□□□□□ -0.27
VPS25-201ENST00000253794 ACOT4Q8N9L9 421 aa13.36□□□□□ -0.27
VPS25-201ENST00000253794 OR2T11Q8NH01 316 aa13.36□□□□□ -0.27
VPS25-201ENST00000253794 AGR3Q8TD06 166 aa13.36□□□□□ -0.27
VPS25-201ENST00000253794 FGF11Q92914 225 aa13.36□□□□□ -0.27
VPS25-201ENST00000253794 NKD1Q969G9 470 aa13.36□□□□□ -0.27
VPS25-201ENST00000253794 C19orf60Q96EN9 201 aa13.36□□□□□ -0.27
VPS25-201ENST00000253794 MRPL1Q9BYD6 325 aaKnown RBP13.36□□□□□ -0.27
VPS25-201ENST00000253794 WDR54Q9H977 334 aa13.36□□□□□ -0.27
VPS25-201ENST00000253794 AKIRIN1Q9H9L7 192 aaPredicted RBP13.36□□□□□ -0.27
VPS25-201ENST00000253794 MEAF6Q9HAF1 191 aa13.36□□□□□ -0.27
VPS25-201ENST00000253794 SSUH2Q9Y2M2 353 aa13.36□□□□□ -0.27
VPS25-201ENST00000253794 FIS1Q9Y3D6 152 aa13.36□□□□□ -0.27
VPS25-201ENST00000253794 SEC16AO15027 2179 aa13.36□□□□□ -0.27
VPS25-201ENST00000253794 FER1L5A0AVI2 2057 aa13.36□□□□□ -0.27
VPS25-201ENST00000253794 A0A0A6YYD5 115 aa13.35□□□□□ -0.27
VPS25-201ENST00000253794 TEX51A0A1B0GUA7 166 aa13.35□□□□□ -0.27
VPS25-201ENST00000253794 VSTM2BA6NLU5 285 aa13.35□□□□□ -0.27
VPS25-201ENST00000253794 C21orf140B9A014 251 aa13.35□□□□□ -0.27
VPS25-201ENST00000253794 SGK494L7N484 410 aa13.35□□□□□ -0.27
VPS25-201ENST00000253794 LSM1O15116 133 aaKnown RBP13.35□□□□□ -0.27
VPS25-201ENST00000253794 RDH16O75452 317 aa13.35□□□□□ -0.27
VPS25-201ENST00000253794 TGDSO95455 350 aa13.35□□□□□ -0.27
VPS25-201ENST00000253794 JUNP05412 331 aaKnown RBP13.35□□□□□ -0.27
VPS25-201ENST00000253794 CD63P08962 238 aa13.35□□□□□ -0.27
VPS25-201ENST00000253794 CCNYL3P0C7X3 344 aa13.35□□□□□ -0.27
VPS25-201ENST00000253794 FBLP22087 321 aaKnown RBP13.35□□□□□ -0.27
VPS25-201ENST00000253794 IL10P22301 178 aa13.35□□□□□ -0.27
VPS25-201ENST00000253794 SSR2P43308 183 aa13.35□□□□□ -0.27
VPS25-201ENST00000253794 OR1D4P47884 311 aa13.35□□□□□ -0.27
VPS25-201ENST00000253794 BTN3A2P78410 334 aa13.35□□□□□ -0.27
VPS25-201ENST00000253794 C1orf189Q5VU69 101 aa13.35□□□□□ -0.27
VPS25-201ENST00000253794 LCN10Q6JVE6 187 aa13.35□□□□□ -0.27
VPS25-201ENST00000253794 SCIMPQ6UWF3 145 aa13.35□□□□□ -0.27
VPS25-201ENST00000253794 OVCH1Q7RTY7 1134 aa13.35□□□□□ -0.27
VPS25-201ENST00000253794 COMMD6Q7Z4G1 85 aa13.35□□□□□ -0.27
VPS25-201ENST00000253794 CACNA2D3Q8IZS8 1091 aa13.35□□□□□ -0.27
VPS25-201ENST00000253794 ADAMTS18Q8TE60 1221 aa13.35□□□□□ -0.27
VPS25-201ENST00000253794 MMABQ96EY8 250 aaPredicted RBP13.35□□□□□ -0.27
VPS25-201ENST00000253794 MAELQ96JY0 434 aaKnown RBP13.35□□□□□ -0.27
VPS25-201ENST00000253794 C3orf30Q96M34 536 aa13.35□□□□□ -0.27
VPS25-201ENST00000253794 OR1F2PQ96R84 312 aa13.35□□□□□ -0.27
VPS25-201ENST00000253794 CHST8Q9H2A9 424 aa13.35□□□□□ -0.27
VPS25-201ENST00000253794 LYRM4Q9HD34 91 aa13.35□□□□□ -0.27
VPS25-201ENST00000253794 MKKSQ9NPJ1 570 aaPredicted RBP13.35□□□□□ -0.27
VPS25-201ENST00000253794 RIC8BQ9NVN3 520 aa13.35□□□□□ -0.27
VPS25-201ENST00000253794 NDOR1Q9UHB4 597 aa13.35□□□□□ -0.27
VPS25-201ENST00000253794 MCM8Q9UJA3 840 aa13.35□□□□□ -0.27
VPS25-201ENST00000253794 TMED5Q9Y3A6 229 aa13.35□□□□□ -0.27
VPS25-201ENST00000253794 PCDHGA6Q9Y5G7 932 aa13.35□□□□□ -0.27
VPS25-201ENST00000253794 PTGDR2Q9Y5Y4 395 aa13.35□□□□□ -0.27
VPS25-201ENST00000253794 FRYQ5TBA9 3013 aa13.34□□□□□ -0.27
VPS25-201ENST00000253794 TRPC5OSA6NMA1 111 aa13.34□□□□□ -0.27
VPS25-201ENST00000253794 TCP11X1B4DZS4 312 aa13.34□□□□□ -0.27
VPS25-201ENST00000253794 SAP18O00422 153 aaKnown RBP13.34□□□□□ -0.27
VPS25-201ENST00000253794 RTCAO00442 366 aaKnown RBP13.34□□□□□ -0.27
VPS25-201ENST00000253794 B3GALT2O43825 422 aa13.34□□□□□ -0.27
VPS25-201ENST00000253794 VPS4BO75351 444 aa13.34□□□□□ -0.27
VPS25-201ENST00000253794 SH3BGRLO75368 114 aa13.34□□□□□ -0.27
VPS25-201ENST00000253794 EEDO75530 441 aaKnown RBP13.34□□□□□ -0.27
VPS25-201ENST00000253794 SKAP2O75563 359 aaPredicted RBP13.34□□□□□ -0.27
VPS25-201ENST00000253794 B3GALT4O96024 378 aa13.34□□□□□ -0.27
VPS25-201ENST00000253794 CYC1P08574 325 aa13.34□□□□□ -0.27
VPS25-201ENST00000253794 LINC00032P0C843 101 aa13.34□□□□□ -0.27
VPS25-201ENST00000253794 CERS1P27544 350 aa13.34□□□□□ -0.27
VPS25-201ENST00000253794 TPP2P29144 1249 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms