RNA–Protein interactions for RNA: ENST00000253122.9

SLC6A8-201, Transcript of solute carrier family 6 member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A8, Length 3,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-201ENST00000253122 PRR23AA6NEV1 266 aa15.29■□□□□ 0.04
SLC6A8-201ENST00000253122 RPS7P62081 194 aaKnown RBP15.29■□□□□ 0.04
SLC6A8-201ENST00000253122 MANEALQ5VSG8 457 aa15.29■□□□□ 0.04
SLC6A8-201ENST00000253122 MZT2AQ6P582 158 aa15.29■□□□□ 0.04
SLC6A8-201ENST00000253122 SBSNQ6UWP8 590 aa15.29■□□□□ 0.04
SLC6A8-201ENST00000253122 CHPFQ8IZ52 775 aa15.29■□□□□ 0.04
SLC6A8-201ENST00000253122 DENND6BQ8NEG7 585 aa15.29■□□□□ 0.04
SLC6A8-201ENST00000253122 CLP1Q92989 425 aaKnown RBP15.29■□□□□ 0.04
SLC6A8-201ENST00000253122 ISG20Q96AZ6 181 aaKnown RBP15.29■□□□□ 0.04
SLC6A8-201ENST00000253122 ACAT2Q9BWD1 397 aa15.29■□□□□ 0.04
SLC6A8-201ENST00000253122 MKRN2Q9H000 416 aaKnown RBP15.29■□□□□ 0.04
SLC6A8-201ENST00000253122 RLIMQ9NVW2 624 aa15.29■□□□□ 0.04
SLC6A8-201ENST00000253122 MAU2Q9Y6X3 613 aa15.29■□□□□ 0.04
SLC6A8-201ENST00000253122 INMT-MINDY4F8WBC2 141 aa15.29■□□□□ 0.04
SLC6A8-201ENST00000253122 MRPS14O60783 128 aaKnown RBP15.29■□□□□ 0.04
SLC6A8-201ENST00000253122 AOC2O75106 756 aa15.29■□□□□ 0.04
SLC6A8-201ENST00000253122 CRISP3P54108 245 aa15.29■□□□□ 0.04
SLC6A8-201ENST00000253122 PTGES3Q15185 160 aaKnown RBP15.29■□□□□ 0.04
SLC6A8-201ENST00000253122 ATP13A5Q4VNC0 1218 aa15.29■□□□□ 0.04
SLC6A8-201ENST00000253122 CXorf57Q6NSI4 855 aaKnown RBP15.29■□□□□ 0.04
SLC6A8-201ENST00000253122 FAM180BQ6P0A1 224 aa15.29■□□□□ 0.04
SLC6A8-201ENST00000253122 NPAS3Q8IXF0 933 aa15.29■□□□□ 0.04
SLC6A8-201ENST00000253122 SIMC1Q8NDZ2 872 aa15.29■□□□□ 0.04
SLC6A8-201ENST00000253122 FAM46DQ8NEK8 389 aa15.29■□□□□ 0.04
SLC6A8-201ENST00000253122 ATP6V1C2Q8NEY4 427 aa15.29■□□□□ 0.04
SLC6A8-201ENST00000253122 TP53INP1Q96A56 240 aa15.29■□□□□ 0.04
SLC6A8-201ENST00000253122 TMEM80Q96HE8 168 aa15.29■□□□□ 0.04
SLC6A8-201ENST00000253122 FAM120CQ9NX05 1096 aaKnown RBP15.29■□□□□ 0.04
SLC6A8-201ENST00000253122 SIRT5Q9NXA8 310 aa15.29■□□□□ 0.04
SLC6A8-201ENST00000253122 ELOVL2Q9NXB9 296 aa15.29■□□□□ 0.04
SLC6A8-201ENST00000253122 PCDHB11Q9Y5F2 797 aa15.29■□□□□ 0.04
SLC6A8-201ENST00000253122 TRAV6A0A075B6T7 132 aa15.28■□□□□ 0.04
SLC6A8-201ENST00000253122 SLC35F4A4IF30 521 aa15.28■□□□□ 0.04
SLC6A8-201ENST00000253122 J3KTA2 159 aa15.28■□□□□ 0.04
SLC6A8-201ENST00000253122 SPAM1P38567 509 aa15.28■□□□□ 0.04
SLC6A8-201ENST00000253122 RPS19P39019 145 aaKnown RBP15.28■□□□□ 0.04
SLC6A8-201ENST00000253122 ASMTP46597 345 aa15.28■□□□□ 0.04
SLC6A8-201ENST00000253122 NRIP1P48552 1158 aa15.28■□□□□ 0.04
SLC6A8-201ENST00000253122 GBX1Q14549 363 aa15.28■□□□□ 0.04
SLC6A8-201ENST00000253122 CBX2Q14781 532 aaPredicted RBP15.28■□□□□ 0.04
SLC6A8-201ENST00000253122 ARHGEF6Q15052 776 aa15.28■□□□□ 0.04
SLC6A8-201ENST00000253122 TATDN3Q17R31 274 aa15.28■□□□□ 0.04
SLC6A8-201ENST00000253122 SETMARQ53H47 684 aaPredicted RBP15.28■□□□□ 0.04
SLC6A8-201ENST00000253122 ATAT1Q5SQI0 421 aa15.28■□□□□ 0.04
SLC6A8-201ENST00000253122 PLEKHM3Q6ZWE6 761 aa15.28■□□□□ 0.04
SLC6A8-201ENST00000253122 CBLL1Q75N03 491 aa15.28■□□□□ 0.04
SLC6A8-201ENST00000253122 HOMEZQ8IX15 550 aa15.28■□□□□ 0.04
SLC6A8-201ENST00000253122 C10orf111Q8N326 155 aa15.28■□□□□ 0.04
SLC6A8-201ENST00000253122 C2orf73Q8N5S3 287 aaPredicted RBP15.28■□□□□ 0.04
SLC6A8-201ENST00000253122 KLHDC9Q8NEP7 349 aa15.28■□□□□ 0.04
SLC6A8-201ENST00000253122 C11orf24Q96F05 449 aaPredicted RBP15.28■□□□□ 0.04
SLC6A8-201ENST00000253122 NIPSNAP1Q9BPW8 284 aa15.28■□□□□ 0.04
SLC6A8-201ENST00000253122 DYRK1BQ9Y463 629 aa15.28■□□□□ 0.04
SLC6A8-201ENST00000253122 LRRC37A2A6NM11 1700 aa15.28■□□□□ 0.04
SLC6A8-201ENST00000253122 TRPM7Q96QT4 1865 aa15.28■□□□□ 0.04
SLC6A8-201ENST00000253122 SEPT4O43236 478 aa15.28■□□□□ 0.04
SLC6A8-201ENST00000253122 KCNK5O95279 499 aa15.28■□□□□ 0.04
SLC6A8-201ENST00000253122 CYP17A1P05093 508 aa15.28■□□□□ 0.04
SLC6A8-201ENST00000253122 PRKAR2AP13861 404 aaKnown RBP15.28■□□□□ 0.04
SLC6A8-201ENST00000253122 CAV3P56539 151 aa15.28■□□□□ 0.04
SLC6A8-201ENST00000253122 UXS1Q8NBZ7 420 aa15.28■□□□□ 0.04
SLC6A8-201ENST00000253122 SLC7A6Q92536 515 aa15.28■□□□□ 0.04
SLC6A8-201ENST00000253122 TTLL2Q9BWV7 592 aa15.28■□□□□ 0.04
SLC6A8-201ENST00000253122 BEX1Q9HBH7 125 aa15.28■□□□□ 0.04
SLC6A8-201ENST00000253122 C12orf4Q9NQ89 552 aa15.28■□□□□ 0.04
SLC6A8-201ENST00000253122 FBXO10Q9UK96 956 aa15.28■□□□□ 0.04
SLC6A8-201ENST00000253122 A0A1B0GVM2 712 aa15.28■□□□□ 0.04
SLC6A8-201ENST00000253122 NME6O75414 186 aaPredicted RBP15.28■□□□□ 0.04
SLC6A8-201ENST00000253122 C6orf47O95873 294 aa15.28■□□□□ 0.04
SLC6A8-201ENST00000253122 SERPINA4P29622 427 aa15.28■□□□□ 0.04
SLC6A8-201ENST00000253122 HOXC13P31276 330 aa15.28■□□□□ 0.04
SLC6A8-201ENST00000253122 TIAL1Q01085 375 aaKnown RBP eCLIP15.28■□□□□ 0.04
SLC6A8-201ENST00000253122 SLC14A1Q13336 389 aa15.28■□□□□ 0.04
SLC6A8-201ENST00000253122 IHHQ14623 411 aa15.28■□□□□ 0.04
SLC6A8-201ENST00000253122 HEPACAMQ14CZ8 416 aa15.28■□□□□ 0.04
SLC6A8-201ENST00000253122 CLPPQ16740 277 aaPredicted RBP15.28■□□□□ 0.04
SLC6A8-201ENST00000253122 BICRALQ6AI39 1079 aa15.28■□□□□ 0.04
SLC6A8-201ENST00000253122 ZNF431Q8TF32 576 aaPredicted RBP15.28■□□□□ 0.04
SLC6A8-201ENST00000253122 SUSD3Q96L08 255 aa15.28■□□□□ 0.04
SLC6A8-201ENST00000253122 MAPKAP1Q9BPZ7 522 aa15.28■□□□□ 0.04
SLC6A8-201ENST00000253122 TMED9Q9BVK6 235 aa15.28■□□□□ 0.04
SLC6A8-201ENST00000253122 TSSK6Q9BXA6 273 aa15.28■□□□□ 0.04
SLC6A8-201ENST00000253122 PPIL3Q9H2H8 161 aaKnown RBP15.28■□□□□ 0.04
SLC6A8-201ENST00000253122 PCDH17O14917 1159 aa15.27■□□□□ 0.04
SLC6A8-201ENST00000253122 PLD2O14939 933 aa15.27■□□□□ 0.04
SLC6A8-201ENST00000253122 DSCR3O14972 297 aa15.27■□□□□ 0.04
SLC6A8-201ENST00000253122 CATP04040 527 aaKnown RBP15.27■□□□□ 0.04
SLC6A8-201ENST00000253122 ELNP15502 786 aa15.27■□□□□ 0.04
SLC6A8-201ENST00000253122 PTX3P26022 381 aaPredicted RBP15.27■□□□□ 0.04
SLC6A8-201ENST00000253122 CRISP1P54107 249 aa15.27■□□□□ 0.04
SLC6A8-201ENST00000253122 PLD1Q13393 1074 aa15.27■□□□□ 0.04
SLC6A8-201ENST00000253122 NFATC2Q13469 925 aa15.27■□□□□ 0.04
SLC6A8-201ENST00000253122 POM121L1PQ3SYA9 428 aa15.27■□□□□ 0.04
SLC6A8-201ENST00000253122 LEXMQ3ZCV2 418 aa15.27■□□□□ 0.04
SLC6A8-201ENST00000253122 SERPINA11Q86U17 422 aa15.27■□□□□ 0.04
SLC6A8-201ENST00000253122 XAGE5Q8WWM1 108 aa15.27■□□□□ 0.04
SLC6A8-201ENST00000253122 RTP3Q9BQQ7 232 aa15.27■□□□□ 0.04
SLC6A8-201ENST00000253122 FNDC11Q9BVV2 318 aa15.27■□□□□ 0.04
SLC6A8-201ENST00000253122 MND1Q9BWT6 205 aa15.27■□□□□ 0.04
SLC6A8-201ENST00000253122 C11orf54Q9H0W9 315 aaPredicted RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms