RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 TRNT1Q96Q11 434 aaKnown RBP3.99□□□□□ -1.77
UBE4A-201ENST00000252108 KCNS3Q9BQ31 491 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 TRAF4Q9BUZ4 470 aaPredicted RBP3.99□□□□□ -1.77
UBE4A-201ENST00000252108 TPK1Q9H3S4 243 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 RANBP3Q9H6Z4 567 aaPredicted RBP3.99□□□□□ -1.77
UBE4A-201ENST00000252108 NMRK2Q9NPI5 230 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 SLAMF8Q9P0V8 285 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 COPZ2Q9P299 210 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 TMEFF2Q9UIK5 374 aaPredicted RBP3.99□□□□□ -1.77
UBE4A-201ENST00000252108 OSGIN1Q9UJX0 560 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 KCNE2Q9Y6J6 123 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 DNAH14Q0VDD8 3507 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 GLYATL1P3A0A0U1RQE8 302 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 CBX4O00257 560 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 SCAMP3O14828 347 aaKnown RBP3.99□□□□□ -1.77
UBE4A-201ENST00000252108 SOCS5O75159 536 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 MOSPD3O75425 235 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 ADAP00813 363 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 CYP4B1P13584 511 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 M6PRP20645 277 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 SOAT1P35610 550 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 NUDT1P36639 197 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 MVDP53602 400 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 EPHA5P54756 1037 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 SNRPD1P62314 119 aaKnown RBP3.99□□□□□ -1.77
UBE4A-201ENST00000252108 PITPNAQ00169 270 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 PTPRRQ15256 657 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 ANKDD1AQ495B1 522 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 KDM4DQ6B0I6 523 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 LILRA6Q6PI73 481 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 UBE2R2Q712K3 238 aaPredicted RBP3.99□□□□□ -1.77
UBE4A-201ENST00000252108 B3GNT8Q7Z7M8 397 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 LGI4Q8N135 537 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 SIDT2Q8NBJ9 832 aaKnown RBP3.99□□□□□ -1.77
UBE4A-201ENST00000252108 GTF2H4Q92759 462 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 TMEM159Q96B96 161 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 DIRAS2Q96HU8 199 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 ZNF300Q96RE9 604 aaPredicted RBP3.99□□□□□ -1.77
UBE4A-201ENST00000252108 NT5DC2Q9H857 520 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 ZFYVE1Q9HBF4 777 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 MIEF1Q9NQG6 463 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 AFF4Q9UHB7 1163 aaKnown RBP3.99□□□□□ -1.77
UBE4A-201ENST00000252108 ADAM23O75077 832 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 GCM2O75603 506 aaPredicted RBP3.99□□□□□ -1.77
UBE4A-201ENST00000252108 GADD45GO95257 159 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 SLC25A14O95258 325 aaPredicted RBP3.99□□□□□ -1.77
UBE4A-201ENST00000252108 IL1AP01583 271 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 ENGP17813 658 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 NAT1P18440 290 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 PKLRP30613 574 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 HMGCLP35914 325 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 MLLT3P42568 568 aaPredicted RBP3.99□□□□□ -1.77
UBE4A-201ENST00000252108 RPIAP49247 311 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 ATP12AP54707 1039 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 ERVPABLB-1P60509 514 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 PLEKHS1Q5SXH7 462 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 FRG2Q64ET8 278 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 UNC5DQ6UXZ4 953 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 PCSK9Q8NBP7 692 aaKnown RBP3.99□□□□□ -1.77
UBE4A-201ENST00000252108 ASZ1Q8WWH4 475 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 PPCDCQ96CD2 204 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 FRG2BQ96QU4 278 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 KCNA7Q96RP8 456 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 MBOAT4Q96T53 435 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 SEPT5Q99719 369 aaPredicted RBP3.99□□□□□ -1.77
UBE4A-201ENST00000252108 GABARAPL3Q9BY60 117 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 ROGDIQ9GZN7 287 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 HMX1Q9NP08 348 aaPredicted RBP3.99□□□□□ -1.77
UBE4A-201ENST00000252108 RASSF1Q9NS23 344 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 ZDHHC3Q9NYG2 299 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 SH3BP4Q9P0V3 963 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 FKBPLQ9UIM3 349 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 SLC25A13Q9UJS0 675 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 PNMA8BQ9ULN7 279 aaPredicted RBP3.99□□□□□ -1.77
UBE4A-201ENST00000252108 EXO1Q9UQ84 846 aaKnown RBP3.99□□□□□ -1.77
UBE4A-201ENST00000252108 TMEM98Q9Y2Y6 226 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 PCDHB14Q9Y5E9 798 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 U3KQV3 271 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 PIPSLA2A3N6 862 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 ARRDC5A6NEK1 342 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 ANKRD66B4E2M5 251 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 PRR23D1E9PI22 279 aaPredicted RBP3.99□□□□□ -1.77
UBE4A-201ENST00000252108 FFAR3O14843 346 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 GPR42O15529 346 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 PDPK1O15530 556 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 COCHO43405 550 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 REM1O75628 298 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 ALX3O95076 343 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 GJB5O95377 273 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 GSTM1P09488 218 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 PRR23D2P0DMB1 279 aaPredicted RBP3.99□□□□□ -1.77
UBE4A-201ENST00000252108 C6P13671 934 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 MYL9P24844 172 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 IDUAP35475 653 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 OR1G1P47890 313 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 FLT3LGP49771 235 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 DGKQP52824 942 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 BLVRAP53004 296 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 AP3S2P59780 193 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 DOC2BQ14184 412 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms