RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 TMIGD1Q6UXZ0 262 aa19.71■□□□□ 0.75
NEDD8-201ENST00000250495 Q6ZPB1 254 aaPredicted RBP19.71■□□□□ 0.75
NEDD8-201ENST00000250495 MCEMP1Q8IX19 187 aa19.71■□□□□ 0.75
NEDD8-201ENST00000250495 KLHDC8AQ8IYD2 350 aa19.71■□□□□ 0.75
NEDD8-201ENST00000250495 NFAM1Q8NET5 270 aaPredicted RBP19.71■□□□□ 0.75
NEDD8-201ENST00000250495 ANKRD49Q8WVL7 239 aa19.71■□□□□ 0.75
NEDD8-201ENST00000250495 TMEM125Q96AQ2 219 aa19.71■□□□□ 0.75
NEDD8-201ENST00000250495 RHBDF1Q96CC6 855 aa19.71■□□□□ 0.75
NEDD8-201ENST00000250495 SEC16BQ96JE7 1060 aa19.71■□□□□ 0.75
NEDD8-201ENST00000250495 NPLQ9BXD5 320 aaPredicted RBP19.71■□□□□ 0.75
NEDD8-201ENST00000250495 TSPAN10Q9H1Z9 355 aaPredicted RBP19.71■□□□□ 0.75
NEDD8-201ENST00000250495 NECTIN3Q9NQS3 549 aa19.71■□□□□ 0.75
NEDD8-201ENST00000250495 A8MUA0 341 aa19.7■□□□□ 0.74
NEDD8-201ENST00000250495 NME2P1O60361 137 aa19.7■□□□□ 0.74
NEDD8-201ENST00000250495 AGAP20933 346 aa19.7■□□□□ 0.74
NEDD8-201ENST00000250495 NME2P22392 152 aa19.7■□□□□ 0.74
NEDD8-201ENST00000250495 GRNP28799 593 aaKnown RBP19.7■□□□□ 0.74
NEDD8-201ENST00000250495 HPDP32754 393 aaPredicted RBP19.7■□□□□ 0.74
NEDD8-201ENST00000250495 TRHRP34981 398 aaPredicted RBP19.7■□□□□ 0.74
NEDD8-201ENST00000250495 GDF5P43026 501 aa19.7■□□□□ 0.74
NEDD8-201ENST00000250495 SLC6A12P48065 614 aa19.7■□□□□ 0.74
NEDD8-201ENST00000250495 HLCSP50747 726 aa19.7■□□□□ 0.74
NEDD8-201ENST00000250495 CBLBQ13191 982 aa19.7■□□□□ 0.74
NEDD8-201ENST00000250495 FASTKD3Q14CZ7 662 aaKnown RBP19.7■□□□□ 0.74
NEDD8-201ENST00000250495 SLCO4C1Q6ZQN7 724 aa19.7■□□□□ 0.74
NEDD8-201ENST00000250495 CEP97Q8IW35 865 aa19.7■□□□□ 0.74
NEDD8-201ENST00000250495 ZBED8Q8IZ13 594 aa19.7■□□□□ 0.74
NEDD8-201ENST00000250495 KRT78Q8N1N4 520 aa19.7■□□□□ 0.74
NEDD8-201ENST00000250495 GHDCQ8N2G8 530 aa19.7■□□□□ 0.74
NEDD8-201ENST00000250495 BBOF1Q8ND07 529 aa19.7■□□□□ 0.74
NEDD8-201ENST00000250495 GAL3ST3Q96A11 431 aa19.7■□□□□ 0.74
NEDD8-201ENST00000250495 NAPGQ99747 312 aaPredicted RBP19.7■□□□□ 0.74
NEDD8-201ENST00000250495 PITHD1Q9GZP4 211 aaPredicted RBP19.7■□□□□ 0.74
NEDD8-201ENST00000250495 NT5DC2Q9H857 520 aa19.7■□□□□ 0.74
NEDD8-201ENST00000250495 RNF14Q9UBS8 474 aa19.7■□□□□ 0.74
NEDD8-201ENST00000250495 TINAGQ9UJW2 476 aa19.7■□□□□ 0.74
NEDD8-201ENST00000250495 A0A088AWK7 358 aa19.69■□□□□ 0.74
NEDD8-201ENST00000250495 CLDN4O14493 209 aa19.69■□□□□ 0.74
NEDD8-201ENST00000250495 TP73O15350 636 aa19.69■□□□□ 0.74
NEDD8-201ENST00000250495 ZNF10P21506 573 aaPredicted RBP19.69■□□□□ 0.74
NEDD8-201ENST00000250495 CLCN2P51788 898 aa19.69■□□□□ 0.74
NEDD8-201ENST00000250495 POU4F1Q01851 419 aa19.69■□□□□ 0.74
NEDD8-201ENST00000250495 TERF2Q15554 542 aa19.69■□□□□ 0.74
NEDD8-201ENST00000250495 TGFBIQ15582 683 aa19.69■□□□□ 0.74
NEDD8-201ENST00000250495 SIAH3Q8IW03 269 aa19.69■□□□□ 0.74
NEDD8-201ENST00000250495 ARMC10Q8N2F6 343 aa19.69■□□□□ 0.74
NEDD8-201ENST00000250495 TCAIMQ8N3R3 496 aa19.69■□□□□ 0.74
NEDD8-201ENST00000250495 B3GNT7Q8NFL0 401 aa19.69■□□□□ 0.74
NEDD8-201ENST00000250495 CCT6BQ92526 530 aa19.69■□□□□ 0.74
NEDD8-201ENST00000250495 DERL2Q9GZP9 239 aa19.69■□□□□ 0.74
NEDD8-201ENST00000250495 AICDAQ9GZX7 198 aa19.69■□□□□ 0.74
NEDD8-201ENST00000250495 GPRC5BQ9NZH0 403 aa19.69■□□□□ 0.74
NEDD8-201ENST00000250495 SNX24Q9Y343 169 aa19.69■□□□□ 0.74
NEDD8-201ENST00000250495 LRIT2A6NDA9 550 aa19.68■□□□□ 0.74
NEDD8-201ENST00000250495 ANKDD1BA6NHY2 528 aa19.68■□□□□ 0.74
NEDD8-201ENST00000250495 USP27XA6NNY8 438 aa19.68■□□□□ 0.74
NEDD8-201ENST00000250495 C4orf51C9J302 202 aa19.68■□□□□ 0.74
NEDD8-201ENST00000250495 CLEC3AO75596 197 aa19.68■□□□□ 0.74
NEDD8-201ENST00000250495 ABOP16442 354 aa19.68■□□□□ 0.74
NEDD8-201ENST00000250495 ZNF24P17028 368 aa19.68■□□□□ 0.74
NEDD8-201ENST00000250495 HSD17B7P56937 341 aa19.68■□□□□ 0.74
NEDD8-201ENST00000250495 ADORA2A-AS1P86434 159 aa19.68■□□□□ 0.74
NEDD8-201ENST00000250495 RUNX2Q13950 521 aa19.68■□□□□ 0.74
NEDD8-201ENST00000250495 SLBPQ14493 270 aaKnown RBP eCLIP19.68■□□□□ 0.74
NEDD8-201ENST00000250495 C18orf21Q32NC0 220 aaPredicted RBP19.68■□□□□ 0.74
NEDD8-201ENST00000250495 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.68■□□□□ 0.74
NEDD8-201ENST00000250495 POGLUT1Q8NBL1 392 aa19.68■□□□□ 0.74
NEDD8-201ENST00000250495 ADAMTS18Q8TE60 1221 aa19.68■□□□□ 0.74
NEDD8-201ENST00000250495 PYROXD1Q8WU10 500 aa19.68■□□□□ 0.74
NEDD8-201ENST00000250495 CDKL2Q92772 493 aa19.68■□□□□ 0.74
NEDD8-201ENST00000250495 MS4A6EQ96DS6 147 aa19.68■□□□□ 0.74
NEDD8-201ENST00000250495 TSPAN17Q96FV3 270 aa19.68■□□□□ 0.74
NEDD8-201ENST00000250495 MCMBPQ9BTE3 642 aa19.68■□□□□ 0.74
NEDD8-201ENST00000250495 CNOT10Q9H9A5 744 aaKnown RBP19.68■□□□□ 0.74
NEDD8-201ENST00000250495 PRTFDC1Q9NRG1 225 aa19.68■□□□□ 0.74
NEDD8-201ENST00000250495 TXNDC16Q9P2K2 825 aa19.68■□□□□ 0.74
NEDD8-201ENST00000250495 MRPS33Q9Y291 106 aaKnown RBP19.68■□□□□ 0.74
NEDD8-201ENST00000250495 MEMO1Q9Y316 297 aa19.68■□□□□ 0.74
NEDD8-201ENST00000250495 SYNDIG1LA6NDD5 238 aa19.67■□□□□ 0.74
NEDD8-201ENST00000250495 NCF1BA6NI72 391 aaPredicted RBP19.67■□□□□ 0.74
NEDD8-201ENST00000250495 NCF1CA8MVU1 366 aaPredicted RBP19.67■□□□□ 0.74
NEDD8-201ENST00000250495 KLRC4-KLRK1H3BQV0 150 aa19.67■□□□□ 0.74
NEDD8-201ENST00000250495 CLGNO14967 610 aa19.67■□□□□ 0.74
NEDD8-201ENST00000250495 ERI3O43414 337 aaKnown RBP19.67■□□□□ 0.74
NEDD8-201ENST00000250495 B3GALT2O43825 422 aa19.67■□□□□ 0.74
NEDD8-201ENST00000250495 MYO1DO94832 1006 aa19.67■□□□□ 0.74
NEDD8-201ENST00000250495 NCF1P14598 390 aaPredicted RBP19.67■□□□□ 0.74
NEDD8-201ENST00000250495 PTGER4P35408 488 aa19.67■□□□□ 0.74
NEDD8-201ENST00000250495 GGT5P36269 586 aa19.67■□□□□ 0.74
NEDD8-201ENST00000250495 RPL21P46778 160 aaKnown RBP19.67■□□□□ 0.74
NEDD8-201ENST00000250495 RAB38P57729 211 aa19.67■□□□□ 0.74
NEDD8-201ENST00000250495 CDKL4Q5MAI5 379 aa19.67■□□□□ 0.74
NEDD8-201ENST00000250495 ZNF227Q86WZ6 799 aa19.67■□□□□ 0.74
NEDD8-201ENST00000250495 CPSF7Q8N684 471 aaKnown RBP19.67■□□□□ 0.74
NEDD8-201ENST00000250495 APCDD1LQ8NCL9 501 aa19.67■□□□□ 0.74
NEDD8-201ENST00000250495 KRT12Q99456 494 aa19.67■□□□□ 0.74
NEDD8-201ENST00000250495 EHD1Q9H4M9 534 aa19.67■□□□□ 0.74
NEDD8-201ENST00000250495 PNO1Q9NRX1 252 aaKnown RBP19.67■□□□□ 0.74
NEDD8-201ENST00000250495 DNAJC11Q9NVH1 559 aa19.67■□□□□ 0.74
NEDD8-201ENST00000250495 FBXW2Q9UKT8 454 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms