RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 CYP27C1Q4G0S4 372 aa13.79□□□□□ -0.2
HIF3A-202ENST00000244303 IFI44LQ53G44 452 aa13.79□□□□□ -0.2
HIF3A-202ENST00000244303 PRSS36Q5K4E3 855 aa13.79□□□□□ -0.2
HIF3A-202ENST00000244303 IER5LQ5T953 404 aa13.79□□□□□ -0.2
HIF3A-202ENST00000244303 KIAA0907Q7Z7F0 614 aaPredicted RBP13.79□□□□□ -0.2
HIF3A-202ENST00000244303 PLD3Q8IV08 490 aa13.79□□□□□ -0.2
HIF3A-202ENST00000244303 CCDC103Q8IW40 242 aa13.79□□□□□ -0.2
HIF3A-202ENST00000244303 ZNF557Q8N988 423 aaPredicted RBP13.79□□□□□ -0.2
HIF3A-202ENST00000244303 GOT1L1Q8NHS2 421 aaPredicted RBP13.79□□□□□ -0.2
HIF3A-202ENST00000244303 WDR48Q8TAF3 677 aa13.79□□□□□ -0.2
HIF3A-202ENST00000244303 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.79□□□□□ -0.2
HIF3A-202ENST00000244303 ARMC5Q96C12 935 aa13.79□□□□□ -0.2
HIF3A-202ENST00000244303 RAD9AQ99638 391 aa13.79□□□□□ -0.2
HIF3A-202ENST00000244303 TMEM121BQ9BXQ6 578 aaPredicted RBP13.79□□□□□ -0.2
HIF3A-202ENST00000244303 ITGB1BP2Q9UKP3 347 aa13.79□□□□□ -0.2
HIF3A-202ENST00000244303 NOTCH4Q99466 2003 aa13.79□□□□□ -0.2
HIF3A-202ENST00000244303 HTR3EA5X5Y0 456 aa13.79□□□□□ -0.2
HIF3A-202ENST00000244303 PRAMEF25A6NGN4 478 aa13.79□□□□□ -0.2
HIF3A-202ENST00000244303 ZNF197O14709 1029 aa13.79□□□□□ -0.2
HIF3A-202ENST00000244303 FURINP09958 794 aa13.79□□□□□ -0.2
HIF3A-202ENST00000244303 EPCAMP16422 314 aa13.79□□□□□ -0.2
HIF3A-202ENST00000244303 SLC19A1P41440 591 aa13.79□□□□□ -0.2
HIF3A-202ENST00000244303 MAPK9P45984 424 aa13.79□□□□□ -0.2
HIF3A-202ENST00000244303 CSNK2BP67870 215 aa13.79□□□□□ -0.2
HIF3A-202ENST00000244303 MPEG1Q2M385 716 aa13.79□□□□□ -0.2
HIF3A-202ENST00000244303 GCNT6Q5T4J0 391 aa13.79□□□□□ -0.2
HIF3A-202ENST00000244303 FBXO46Q6PJ61 603 aaPredicted RBP13.79□□□□□ -0.2
HIF3A-202ENST00000244303 CFAP206Q8IYR0 622 aa13.79□□□□□ -0.2
HIF3A-202ENST00000244303 OR52N2Q8NGI0 321 aa13.79□□□□□ -0.2
HIF3A-202ENST00000244303 OR4C15Q8NGM1 316 aa13.79□□□□□ -0.2
HIF3A-202ENST00000244303 OR5AK3PQ8NH89 298 aa13.79□□□□□ -0.2
HIF3A-202ENST00000244303 SP7Q8TDD2 431 aaPredicted RBP13.79□□□□□ -0.2
HIF3A-202ENST00000244303 ZHX1-C8orf76Q96EF9 292 aa13.79□□□□□ -0.2
HIF3A-202ENST00000244303 NIPSNAP1Q9BPW8 284 aa13.79□□□□□ -0.2
HIF3A-202ENST00000244303 OR51B5Q9H339 312 aa13.79□□□□□ -0.2
HIF3A-202ENST00000244303 DMRT3Q9NQL9 472 aa13.79□□□□□ -0.2
HIF3A-202ENST00000244303 PSORS1C1Q9UIG5 152 aa13.79□□□□□ -0.2
HIF3A-202ENST00000244303 OSGIN1Q9UJX0 560 aa13.79□□□□□ -0.2
HIF3A-202ENST00000244303 ZNF232Q9UNY5 417 aa13.79□□□□□ -0.2
HIF3A-202ENST00000244303 TSC22D4Q9Y3Q8 395 aa13.79□□□□□ -0.2
HIF3A-202ENST00000244303 PIPSLA2A3N6 862 aa13.78□□□□□ -0.2
HIF3A-202ENST00000244303 J3KTA2 159 aa13.78□□□□□ -0.2
HIF3A-202ENST00000244303 IDH2P48735 452 aaKnown RBP13.78□□□□□ -0.2
HIF3A-202ENST00000244303 PNLIPRP1P54315 467 aa13.78□□□□□ -0.2
HIF3A-202ENST00000244303 RPS3AP61247 264 aaKnown RBP13.78□□□□□ -0.2
HIF3A-202ENST00000244303 FCHO2Q0JRZ9 810 aa13.78□□□□□ -0.2
HIF3A-202ENST00000244303 C2orf80Q0P641 193 aa13.78□□□□□ -0.2
HIF3A-202ENST00000244303 ELP6Q0PNE2 266 aa13.78□□□□□ -0.2
HIF3A-202ENST00000244303 EXOC3L2Q2M3D2 409 aa13.78□□□□□ -0.2
HIF3A-202ENST00000244303 ZNF658BQ4V348 819 aaPredicted RBP13.78□□□□□ -0.2
HIF3A-202ENST00000244303 PARS2Q7L3T8 475 aaKnown RBP13.78□□□□□ -0.2
HIF3A-202ENST00000244303 RTL10Q7L3V2 364 aa13.78□□□□□ -0.2
HIF3A-202ENST00000244303 PAGE2Q7Z2X7 111 aa13.78□□□□□ -0.2
HIF3A-202ENST00000244303 SLC38A4Q969I6 547 aa13.78□□□□□ -0.2
HIF3A-202ENST00000244303 SPNS1Q9H2V7 528 aa13.78□□□□□ -0.2
HIF3A-202ENST00000244303 EPS8L2Q9H6S3 715 aa13.78□□□□□ -0.2
HIF3A-202ENST00000244303 ZBTB20Q9HC78 741 aaPredicted RBP13.78□□□□□ -0.2
HIF3A-202ENST00000244303 TRIM39Q9HCM9 518 aa13.78□□□□□ -0.2
HIF3A-202ENST00000244303 PRDM8Q9NQV8 689 aa13.78□□□□□ -0.2
HIF3A-202ENST00000244303 DYRK1BQ9Y463 629 aa13.78□□□□□ -0.2
HIF3A-202ENST00000244303 MAP4K5Q9Y4K4 846 aa13.78□□□□□ -0.2
HIF3A-202ENST00000244303 PCDHGA2Q9Y5H1 932 aa13.78□□□□□ -0.2
HIF3A-202ENST00000244303 NINQ8N4C6 2090 aa13.78□□□□□ -0.2
HIF3A-202ENST00000244303 M0R082 166 aa13.78□□□□□ -0.2
HIF3A-202ENST00000244303 FOXE1O00358 373 aaPredicted RBP13.78□□□□□ -0.2
HIF3A-202ENST00000244303 C1GALT1C1LP0DN25 315 aa13.78□□□□□ -0.2
HIF3A-202ENST00000244303 IRS1P35568 1242 aa13.78□□□□□ -0.2
HIF3A-202ENST00000244303 PXNP49023 591 aaPredicted RBP13.78□□□□□ -0.2
HIF3A-202ENST00000244303 PRIM2P49643 509 aa13.78□□□□□ -0.2
HIF3A-202ENST00000244303 NUDT6P53370 316 aa13.78□□□□□ -0.2
HIF3A-202ENST00000244303 ZNF697Q5TEC3 545 aa13.78□□□□□ -0.2
HIF3A-202ENST00000244303 ERAP2Q6P179 960 aa13.78□□□□□ -0.2
HIF3A-202ENST00000244303 TMEM53Q6P2H8 277 aa13.78□□□□□ -0.2
HIF3A-202ENST00000244303 GRASPQ7Z6J2 395 aaPredicted RBP13.78□□□□□ -0.2
HIF3A-202ENST00000244303 RNF130Q86XS8 419 aa13.78□□□□□ -0.2
HIF3A-202ENST00000244303 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.78□□□□□ -0.2
HIF3A-202ENST00000244303 LGI4Q8N135 537 aa13.78□□□□□ -0.2
HIF3A-202ENST00000244303 DNAJC22Q8N4W6 341 aa13.78□□□□□ -0.2
HIF3A-202ENST00000244303 VN1R2Q8NFZ6 395 aa13.78□□□□□ -0.2
HIF3A-202ENST00000244303 C16orf78Q8WTQ4 265 aa13.78□□□□□ -0.2
HIF3A-202ENST00000244303 FCGR1BQ92637 280 aa13.78□□□□□ -0.2
HIF3A-202ENST00000244303 GGHQ92820 318 aa13.78□□□□□ -0.2
HIF3A-202ENST00000244303 BADQ92934 168 aa13.78□□□□□ -0.2
HIF3A-202ENST00000244303 PPCDCQ96CD2 204 aa13.78□□□□□ -0.2
HIF3A-202ENST00000244303 DCSTAMPQ9H295 470 aa13.78□□□□□ -0.2
HIF3A-202ENST00000244303 C1GALT1Q9NS00 363 aa13.78□□□□□ -0.2
HIF3A-202ENST00000244303 PLCXD1Q9NUJ7 323 aa13.78□□□□□ -0.2
HIF3A-202ENST00000244303 WBP1LQ9NX94 342 aa13.78□□□□□ -0.2
HIF3A-202ENST00000244303 POFUT2Q9Y2G5 429 aa13.78□□□□□ -0.2
HIF3A-202ENST00000244303 GPC6Q9Y625 555 aaPredicted RBP13.78□□□□□ -0.2
HIF3A-202ENST00000244303 TLL1O43897 1013 aa13.77□□□□□ -0.21
HIF3A-202ENST00000244303 GPR37L1O60883 481 aa13.77□□□□□ -0.21
HIF3A-202ENST00000244303 KLHL18O94889 574 aa13.77□□□□□ -0.21
HIF3A-202ENST00000244303 ANXA8P13928 327 aa13.77□□□□□ -0.21
HIF3A-202ENST00000244303 CLK1P49759 484 aaKnown RBP13.77□□□□□ -0.21
HIF3A-202ENST00000244303 METAP1P53582 386 aa13.77□□□□□ -0.21
HIF3A-202ENST00000244303 TAS2R50P59544 299 aa13.77□□□□□ -0.21
HIF3A-202ENST00000244303 PDE7AQ13946 482 aa13.77□□□□□ -0.21
HIF3A-202ENST00000244303 TBCEQ15813 527 aaPredicted RBP13.77□□□□□ -0.21
HIF3A-202ENST00000244303 SLC5A12Q1EHB4 618 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms