RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 RPL36Q9Y3U8 105 aaKnown RBP7.27□□□□□ -1.25
RIF1-201ENST00000243326 CHST10O43529 356 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 HLA-EP13747 358 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 PIGGQ5H8A4 983 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 MARVELD2Q8N4S9 558 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 RFKQ969G6 155 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 CEPT1Q9Y6K0 416 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 MEIS3P2A8K0S8 358 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 CHRNA1P02708 482 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 C8BP07358 591 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 ZBTB48P10074 688 aaPredicted RBP7.27□□□□□ -1.25
RIF1-201ENST00000243326 CCL14Q16627 93 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 ABCA11PQ4W5N1 156 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 PLEKHA1Q9HB21 404 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 ZCCHC3Q9NUD5 404 aaKnown RBP7.27□□□□□ -1.25
RIF1-201ENST00000243326 FLRT1Q9NZU1 646 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 A0A1B0GTW7 788 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 PIGRP01833 764 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 PROS1P07225 676 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 MTA1Q13330 715 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 PLEKHG7Q6ZR37 379 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 LRRC52Q8N7C0 313 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 DDX1Q92499 740 aaKnown RBP7.27□□□□□ -1.25
RIF1-201ENST00000243326 FAM46AQ96IP4 442 aaKnown RBP7.27□□□□□ -1.25
RIF1-201ENST00000243326 ASAH2Q9NR71 780 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 LOC102723532A0A0G2JNH3 316 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 HTR3EA5X5Y0 456 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 TMX2-CTNND1H3BSU7 103 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 SCO1O75880 301 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 NPR2P20594 1047 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 KHKP50053 298 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 SIX1Q15475 284 aaPredicted RBP7.27□□□□□ -1.25
RIF1-201ENST00000243326 KIAA0930Q6ICG6 404 aaPredicted RBP7.27□□□□□ -1.25
RIF1-201ENST00000243326 SSX6Q7RTT6 188 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 PLPPR4Q7Z2D5 763 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 RANBP3LQ86VV4 465 aaPredicted RBP7.27□□□□□ -1.25
RIF1-201ENST00000243326 THAP6Q8TBB0 222 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 SLC22A8Q8TCC7 542 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 GTF3C2Q8WUA4 911 aaPredicted RBP7.27□□□□□ -1.25
RIF1-201ENST00000243326 C3orf49Q96BT1 292 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 SEZ6LQ9BYH1 1024 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 CRYZL1O95825 349 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 ARSFP54793 590 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 CELF2-AS1Q8N7Q2 184 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 HHIPQ96QV1 700 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 SECISBP2Q96T21 854 aaKnown RBP7.26□□□□□ -1.25
RIF1-201ENST00000243326 TAC3Q9UHF0 121 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 BTBD19C9JJ37 291 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 NDUFS4O43181 175 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 ZNF254O75437 659 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 MT-ND4P03905 459 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 AKR1C4P17516 323 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 PITPNAQ00169 270 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 NKPD1Q17RQ9 610 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 NKAPLQ5M9Q1 402 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 C1orf220Q5T0J3 134 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 ZNF486Q96H40 463 aaPredicted RBP7.26□□□□□ -1.25
RIF1-201ENST00000243326 NFATC2Q13469 925 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 DPYSL2Q16555 572 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 SCLYQ96I15 445 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 COMMD4Q9H0A8 199 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 FAIMQ9NVQ4 179 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 HCN3Q9P1Z3 774 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 SIX4Q9UIU6 781 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 MYH7BA7E2Y1 1941 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 A0A0D9SEW6 157 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 ENTPD6O75354 484 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 SMPD1P17405 629 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 VARS2Q5ST30 1063 aaKnown RBP7.26□□□□□ -1.25
RIF1-201ENST00000243326 WDR53Q7Z5U6 358 aaPredicted RBP7.26□□□□□ -1.25
RIF1-201ENST00000243326 SRFBP1Q8NEF9 429 aaKnown RBP7.26□□□□□ -1.25
RIF1-201ENST00000243326 CDKN2AIPNLQ96HQ2 116 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 CFL2Q9Y281 166 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 KIF1AQ12756 1690 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 RLN2P04090 185 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 EPHX1P07099 455 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 CD72P21854 359 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 ZDHHC20Q5W0Z9 365 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 OR4N5Q8IXE1 308 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 UGT2A1Q9Y4X1 527 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 B3GALT1Q9Y5Z6 326 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 MMP20O60882 483 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 MAS1P04201 325 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 GTF2F2P13984 249 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 CDH11P55287 796 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 BTN1A1Q13410 526 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 ANKRD54Q6NXT1 300 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 ZSCAN1Q8NBB4 408 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 FLYWCH1Q4VC44 716 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 DNAJB8Q8NHS0 232 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 SLC25A44Q96H78 314 aaPredicted RBP7.26□□□□□ -1.25
RIF1-201ENST00000243326 AIF1LQ9BQI0 150 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 USP29Q9HBJ7 922 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 SLC38A8A6NNN8 435 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 SLC1A7O00341 560 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 UCHL1P09936 223 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 SLC35E2BP0CK96 405 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 CDH4P55283 916 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 SMN1Q16637 294 aaKnown RBP7.26□□□□□ -1.25
RIF1-201ENST00000243326 SLC36A3Q495N2 470 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms