RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 ABRAXAS1Q6UWZ7 409 aa17.64■□□□□ 0.41
HOXC11-201ENST00000243082 PATL1Q86TB9 770 aaKnown RBP17.64■□□□□ 0.41
HOXC11-201ENST00000243082 OFCC1Q8IZS5 231 aa17.64■□□□□ 0.41
HOXC11-201ENST00000243082 TRIML2Q8N7C3 387 aa17.64■□□□□ 0.41
HOXC11-201ENST00000243082 OR52N2Q8NGI0 321 aa17.64■□□□□ 0.41
HOXC11-201ENST00000243082 RGMAQ96B86 450 aa17.64■□□□□ 0.41
HOXC11-201ENST00000243082 SDCCAG3Q96C92 435 aa17.64■□□□□ 0.41
HOXC11-201ENST00000243082 WDR92Q96MX6 357 aa17.64■□□□□ 0.41
HOXC11-201ENST00000243082 ABCG4Q9H172 646 aa17.64■□□□□ 0.41
HOXC11-201ENST00000243082 EPB41L1Q9H4G0 881 aa17.64■□□□□ 0.41
HOXC11-201ENST00000243082 KIR3DX1Q9H7L2 352 aa17.64■□□□□ 0.41
HOXC11-201ENST00000243082 CLK4Q9HAZ1 481 aaKnown RBP17.64■□□□□ 0.41
HOXC11-201ENST00000243082 MRPS30Q9NP92 439 aaKnown RBP17.64■□□□□ 0.41
HOXC11-201ENST00000243082 VNN3Q9NY84 501 aa17.64■□□□□ 0.41
HOXC11-201ENST00000243082 SPHK1Q9NYA1 384 aa17.64■□□□□ 0.41
HOXC11-201ENST00000243082 USE1Q9NZ43 259 aa17.64■□□□□ 0.41
HOXC11-201ENST00000243082 RAPGEFL1Q9UHV5 662 aa17.64■□□□□ 0.41
HOXC11-201ENST00000243082 ACSL6Q9UKU0 697 aa17.64■□□□□ 0.41
HOXC11-201ENST00000243082 MMP17Q9ULZ9 603 aa17.64■□□□□ 0.41
HOXC11-201ENST00000243082 ABCG2Q9UNQ0 655 aa17.64■□□□□ 0.41
HOXC11-201ENST00000243082 TMPRSS11DO60235 418 aa17.63■□□□□ 0.41
HOXC11-201ENST00000243082 TBX19O60806 448 aa17.63■□□□□ 0.41
HOXC11-201ENST00000243082 APBB3O95704 486 aa17.63■□□□□ 0.41
HOXC11-201ENST00000243082 ALBP02768 609 aa17.63■□□□□ 0.41
HOXC11-201ENST00000243082 TCEA2Q15560 299 aa17.63■□□□□ 0.41
HOXC11-201ENST00000243082 FBXO43Q4G163 708 aa17.63■□□□□ 0.41
HOXC11-201ENST00000243082 FAM180BQ6P0A1 224 aa17.63■□□□□ 0.41
HOXC11-201ENST00000243082 SPESP1Q6UW49 350 aa17.63■□□□□ 0.41
HOXC11-201ENST00000243082 CCL4L1Q8NHW4 92 aa17.63■□□□□ 0.41
HOXC11-201ENST00000243082 TSACCQ96A04 125 aaPredicted RBP17.63■□□□□ 0.41
HOXC11-201ENST00000243082 TBC1D20Q96BZ9 403 aa17.63■□□□□ 0.41
HOXC11-201ENST00000243082 HSH2DQ96JZ2 352 aa17.63■□□□□ 0.41
HOXC11-201ENST00000243082 QRFPRQ96P65 431 aa17.63■□□□□ 0.41
HOXC11-201ENST00000243082 HEBP2Q9Y5Z4 205 aa17.63■□□□□ 0.41
HOXC11-201ENST00000243082 PLXND1Q9Y4D7 1925 aa17.63■□□□□ 0.41
HOXC11-201ENST00000243082 TMEM229AB2RXF0 380 aa17.62■□□□□ 0.41
HOXC11-201ENST00000243082 NARSO43776 548 aaKnown RBP17.62■□□□□ 0.41
HOXC11-201ENST00000243082 NOBOXO60393 691 aa17.62■□□□□ 0.41
HOXC11-201ENST00000243082 OR6B1O95007 311 aa17.62■□□□□ 0.41
HOXC11-201ENST00000243082 CD72P21854 359 aa17.62■□□□□ 0.41
HOXC11-201ENST00000243082 BCL6P41182 706 aa17.62■□□□□ 0.41
HOXC11-201ENST00000243082 VLDLRP98155 873 aa17.62■□□□□ 0.41
HOXC11-201ENST00000243082 SLC5A12Q1EHB4 618 aa17.62■□□□□ 0.41
HOXC11-201ENST00000243082 NADK2Q4G0N4 442 aa17.62■□□□□ 0.41
HOXC11-201ENST00000243082 TTC33Q6PID6 262 aaPredicted RBP17.62■□□□□ 0.41
HOXC11-201ENST00000243082 ANGPTL8Q6UXH0 198 aa17.62■□□□□ 0.41
HOXC11-201ENST00000243082 WASH2PQ6VEQ5 465 aa17.62■□□□□ 0.41
HOXC11-201ENST00000243082 RD3Q7Z3Z2 195 aa17.62■□□□□ 0.41
HOXC11-201ENST00000243082 NUDT13Q86X67 352 aa17.62■□□□□ 0.41
HOXC11-201ENST00000243082 FBXL6Q8N531 539 aa17.62■□□□□ 0.41
HOXC11-201ENST00000243082 AMER3Q8N944 861 aa17.62■□□□□ 0.41
HOXC11-201ENST00000243082 C11orf65Q8NCR3 313 aa17.62■□□□□ 0.41
HOXC11-201ENST00000243082 PJA1Q8NG27 643 aa17.62■□□□□ 0.41
HOXC11-201ENST00000243082 OR2L3Q8NG85 312 aa17.62■□□□□ 0.41
HOXC11-201ENST00000243082 OR5AK3PQ8NH89 298 aa17.62■□□□□ 0.41
HOXC11-201ENST00000243082 JPH3Q8WXH2 748 aaPredicted RBP17.62■□□□□ 0.41
HOXC11-201ENST00000243082 ASPSCR1Q9BZE9 553 aa17.62■□□□□ 0.41
HOXC11-201ENST00000243082 GRIP2Q9C0E4 1043 aa17.62■□□□□ 0.41
HOXC11-201ENST00000243082 DDX31Q9H8H2 851 aaKnown RBP17.62■□□□□ 0.41
HOXC11-201ENST00000243082 C1GALT1Q9NS00 363 aa17.62■□□□□ 0.41
HOXC11-201ENST00000243082 TMEM184CQ9NVA4 438 aa17.62■□□□□ 0.41
HOXC11-201ENST00000243082 EBF1Q9UH73 591 aa17.62■□□□□ 0.41
HOXC11-201ENST00000243082 ADAM29Q9UKF5 820 aa17.62■□□□□ 0.41
HOXC11-201ENST00000243082 COLEC10Q9Y6Z7 277 aa17.62■□□□□ 0.41
HOXC11-201ENST00000243082 SMIM31A0A1B0GVY4 71 aa17.62■□□□□ 0.41
HOXC11-201ENST00000243082 LRIT2A6NDA9 550 aa17.62■□□□□ 0.41
HOXC11-201ENST00000243082 LRRC72A6NJI9 287 aa17.62■□□□□ 0.41
HOXC11-201ENST00000243082 PPM1DO15297 605 aa17.62■□□□□ 0.41
HOXC11-201ENST00000243082 ASGR2P07307 311 aa17.62■□□□□ 0.41
HOXC11-201ENST00000243082 HOXB3P14651 431 aaPredicted RBP17.62■□□□□ 0.41
HOXC11-201ENST00000243082 PRKACGP22612 351 aa17.62■□□□□ 0.41
HOXC11-201ENST00000243082 ABATP80404 500 aa17.62■□□□□ 0.41
HOXC11-201ENST00000243082 HEPACAMQ14CZ8 416 aa17.62■□□□□ 0.41
HOXC11-201ENST00000243082 ZIC1Q15915 447 aa17.62■□□□□ 0.41
HOXC11-201ENST00000243082 ZNF786Q8N393 782 aa17.62■□□□□ 0.41
HOXC11-201ENST00000243082 TTLQ8NG68 377 aa17.62■□□□□ 0.41
HOXC11-201ENST00000243082 RDH12Q96NR8 316 aa17.62■□□□□ 0.41
HOXC11-201ENST00000243082 TEFMQ96QE5 360 aaKnown RBP17.62■□□□□ 0.41
HOXC11-201ENST00000243082 RBM4BQ9BQ04 359 aaKnown RBP17.62■□□□□ 0.41
HOXC11-201ENST00000243082 RBM4Q9BWF3 364 aaKnown RBP17.62■□□□□ 0.41
HOXC11-201ENST00000243082 TMEM121BQ9BXQ6 578 aaPredicted RBP17.62■□□□□ 0.41
HOXC11-201ENST00000243082 TTYH1Q9H313 450 aaPredicted RBP17.62■□□□□ 0.41
HOXC11-201ENST00000243082 TOR3AQ9H497 397 aa17.62■□□□□ 0.41
HOXC11-201ENST00000243082 SLAMF7Q9NQ25 335 aa17.62■□□□□ 0.41
HOXC11-201ENST00000243082 U3KQV3 271 aa17.62■□□□□ 0.41
HOXC11-201ENST00000243082 TRIM64A6NGJ6 449 aa17.61■□□□□ 0.41
HOXC11-201ENST00000243082 C10orf142B7Z368 130 aa17.61■□□□□ 0.41
HOXC11-201ENST00000243082 HAT1O14929 419 aa17.61■□□□□ 0.41
HOXC11-201ENST00000243082 E2F6O75461 281 aa17.61■□□□□ 0.41
HOXC11-201ENST00000243082 SEC24DO94855 1032 aaPredicted RBP17.61■□□□□ 0.41
HOXC11-201ENST00000243082 FABP3P05413 133 aa17.61■□□□□ 0.41
HOXC11-201ENST00000243082 SERPIND1P05546 499 aa17.61■□□□□ 0.41
HOXC11-201ENST00000243082 NR1H2P55055 460 aa17.61■□□□□ 0.41
HOXC11-201ENST00000243082 TEAD4Q15561 434 aa17.61■□□□□ 0.41
HOXC11-201ENST00000243082 KCTD21Q4G0X4 260 aa17.61■□□□□ 0.41
HOXC11-201ENST00000243082 IQCCQ4KMZ1 466 aa17.61■□□□□ 0.41
HOXC11-201ENST00000243082 OR4C11Q6IEV9 310 aa17.61■□□□□ 0.41
HOXC11-201ENST00000243082 OR2T5Q6IEZ7 315 aa17.61■□□□□ 0.41
HOXC11-201ENST00000243082 RNF130Q86XS8 419 aa17.61■□□□□ 0.41
HOXC11-201ENST00000243082 TMEM145Q8NBT3 493 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 452.2 ms