RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 ESR1P03372 595 aa12.95□□□□□ -0.34
DDX39A-201ENST00000242776 PKMP14618 531 aaKnown RBP12.95□□□□□ -0.34
DDX39A-201ENST00000242776 EZRP15311 586 aaKnown RBP12.95□□□□□ -0.34
DDX39A-201ENST00000242776 CNTFP26441 200 aa12.95□□□□□ -0.34
DDX39A-201ENST00000242776 PTGS2P35354 604 aa12.95□□□□□ -0.34
DDX39A-201ENST00000242776 PNLIPRP1P54315 467 aa12.95□□□□□ -0.34
DDX39A-201ENST00000242776 CASP8Q14790 479 aa12.95□□□□□ -0.34
DDX39A-201ENST00000242776 ACSBG2Q5FVE4 666 aa12.95□□□□□ -0.34
DDX39A-201ENST00000242776 LGSNQ5TDP6 509 aa12.95□□□□□ -0.34
DDX39A-201ENST00000242776 ZNF425Q6IV72 752 aa12.95□□□□□ -0.34
DDX39A-201ENST00000242776 LRIG3Q6UXM1 1119 aa12.95□□□□□ -0.34
DDX39A-201ENST00000242776 HDXQ7Z353 690 aa12.95□□□□□ -0.34
DDX39A-201ENST00000242776 RIBC1Q8N443 379 aaPredicted RBP12.95□□□□□ -0.34
DDX39A-201ENST00000242776 SLC5A8Q8N695 610 aa12.95□□□□□ -0.34
DDX39A-201ENST00000242776 HORMAD2Q8N7B1 307 aa12.95□□□□□ -0.34
DDX39A-201ENST00000242776 ACBD4Q8NC06 268 aa12.95□□□□□ -0.34
DDX39A-201ENST00000242776 M1APQ8TC57 530 aa12.95□□□□□ -0.34
DDX39A-201ENST00000242776 LPGAT1Q92604 370 aa12.95□□□□□ -0.34
DDX39A-201ENST00000242776 MRRFQ96E11 262 aaKnown RBP12.95□□□□□ -0.34
DDX39A-201ENST00000242776 PEX11GQ96HA9 241 aa12.95□□□□□ -0.34
DDX39A-201ENST00000242776 PRAP1Q96NZ9 151 aa12.95□□□□□ -0.34
DDX39A-201ENST00000242776 RBBP8Q99708 897 aa12.95□□□□□ -0.34
DDX39A-201ENST00000242776 ROPN1BQ9BZX4 212 aaPredicted RBP12.95□□□□□ -0.34
DDX39A-201ENST00000242776 RHOJQ9H4E5 214 aa12.95□□□□□ -0.34
DDX39A-201ENST00000242776 ROPN1Q9HAT0 212 aaPredicted RBP12.95□□□□□ -0.34
DDX39A-201ENST00000242776 CCM2LQ9NUG4 571 aaPredicted RBP12.95□□□□□ -0.34
DDX39A-201ENST00000242776 SLC17A6Q9P2U8 582 aa12.95□□□□□ -0.34
DDX39A-201ENST00000242776 TNFRSF10DQ9UBN6 386 aa12.95□□□□□ -0.34
DDX39A-201ENST00000242776 ZNF180Q9UJW8 692 aa12.95□□□□□ -0.34
DDX39A-201ENST00000242776 RNF6Q9Y252 685 aa12.95□□□□□ -0.34
DDX39A-201ENST00000242776 MAP1AP78559 2803 aaPredicted RBP12.95□□□□□ -0.34
DDX39A-201ENST00000242776 ANKHD1Q8IWZ3 2542 aaKnown RBP12.95□□□□□ -0.34
DDX39A-201ENST00000242776 TXNDC9O14530 226 aa12.94□□□□□ -0.34
DDX39A-201ENST00000242776 KPNA5O15131 536 aa12.94□□□□□ -0.34
DDX39A-201ENST00000242776 CDH16O75309 829 aa12.94□□□□□ -0.34
DDX39A-201ENST00000242776 RDH16O75452 317 aa12.94□□□□□ -0.34
DDX39A-201ENST00000242776 PIAS1O75925 651 aa12.94□□□□□ -0.34
DDX39A-201ENST00000242776 HAUS5O94927 633 aa12.94□□□□□ -0.34
DDX39A-201ENST00000242776 ZWINTO95229 277 aa12.94□□□□□ -0.34
DDX39A-201ENST00000242776 CCNDBP1O95273 360 aa12.94□□□□□ -0.34
DDX39A-201ENST00000242776 AHSGP02765 367 aa12.94□□□□□ -0.34
DDX39A-201ENST00000242776 SHBGP04278 402 aa12.94□□□□□ -0.34
DDX39A-201ENST00000242776 F7P08709 466 aaPredicted RBP12.94□□□□□ -0.34
DDX39A-201ENST00000242776 CHRM3P20309 590 aa12.94□□□□□ -0.34
DDX39A-201ENST00000242776 TPP2P29144 1249 aaPredicted RBP12.94□□□□□ -0.34
DDX39A-201ENST00000242776 AGTR2P50052 363 aa12.94□□□□□ -0.34
DDX39A-201ENST00000242776 TAS2R50P59544 299 aa12.94□□□□□ -0.34
DDX39A-201ENST00000242776 PRDX1Q06830 199 aaKnown RBP12.94□□□□□ -0.34
DDX39A-201ENST00000242776 FAM53BQ14153 422 aa12.94□□□□□ -0.34
DDX39A-201ENST00000242776 ABRAXAS2Q15018 415 aa12.94□□□□□ -0.34
DDX39A-201ENST00000242776 NSDHLQ15738 373 aa12.94□□□□□ -0.34
DDX39A-201ENST00000242776 EXT1Q16394 746 aa12.94□□□□□ -0.34
DDX39A-201ENST00000242776 FAM45BPQ6NSW5 357 aa12.94□□□□□ -0.34
DDX39A-201ENST00000242776 CYP4X1Q8N118 509 aa12.94□□□□□ -0.34
DDX39A-201ENST00000242776 EID3Q8N140 333 aa12.94□□□□□ -0.34
DDX39A-201ENST00000242776 FAM45AQ8TCE6 357 aa12.94□□□□□ -0.34
DDX39A-201ENST00000242776 ANKRD7Q92527 254 aa12.94□□□□□ -0.34
DDX39A-201ENST00000242776 VPS39Q96JC1 886 aa12.94□□□□□ -0.34
DDX39A-201ENST00000242776 TREX2Q9BQ50 279 aaPredicted RBP12.94□□□□□ -0.34
DDX39A-201ENST00000242776 MMP25Q9NPA2 562 aa12.94□□□□□ -0.34
DDX39A-201ENST00000242776 UTP6Q9NYH9 597 aaKnown RBP12.94□□□□□ -0.34
DDX39A-201ENST00000242776 CRYL1Q9Y2S2 319 aa12.94□□□□□ -0.34
DDX39A-201ENST00000242776 PSAT1Q9Y617 370 aa12.94□□□□□ -0.34
DDX39A-201ENST00000242776 ZNF407Q9C0G0 2248 aa12.93□□□□□ -0.34
DDX39A-201ENST00000242776 IQANK1A0A1B0GTG1 560 aa12.93□□□□□ -0.34
DDX39A-201ENST00000242776 A0A1B0GTL3 188 aa12.93□□□□□ -0.34
DDX39A-201ENST00000242776 E5RI56 91 aa12.93□□□□□ -0.34
DDX39A-201ENST00000242776 HS6ST1O60243 411 aa12.93□□□□□ -0.34
DDX39A-201ENST00000242776 NME2P1O60361 137 aa12.93□□□□□ -0.34
DDX39A-201ENST00000242776 MATN4O95460 622 aa12.93□□□□□ -0.34
DDX39A-201ENST00000242776 SLC16A8O95907 504 aa12.93□□□□□ -0.34
DDX39A-201ENST00000242776 DRD2P14416 443 aa12.93□□□□□ -0.34
DDX39A-201ENST00000242776 KLK2P20151 261 aa12.93□□□□□ -0.34
DDX39A-201ENST00000242776 NME2P22392 152 aa12.93□□□□□ -0.34
DDX39A-201ENST00000242776 MEOX1P50221 254 aa12.93□□□□□ -0.34
DDX39A-201ENST00000242776 NR0B1P51843 470 aaKnown RBP12.93□□□□□ -0.34
DDX39A-201ENST00000242776 OR4D2P58180 307 aa12.93□□□□□ -0.34
DDX39A-201ENST00000242776 PPP2R2AP63151 447 aa12.93□□□□□ -0.34
DDX39A-201ENST00000242776 SNTB1Q13884 538 aaKnown RBP12.93□□□□□ -0.34
DDX39A-201ENST00000242776 CEBPEQ15744 281 aa12.93□□□□□ -0.34
DDX39A-201ENST00000242776 ADGRD1Q6QNK2 874 aa12.93□□□□□ -0.34
DDX39A-201ENST00000242776 ZC3HC1Q86WB0 502 aaKnown RBP12.93□□□□□ -0.34
DDX39A-201ENST00000242776 TDRPQ86YL5 185 aa12.93□□□□□ -0.34
DDX39A-201ENST00000242776 GPATCH11Q8N954 259 aa12.93□□□□□ -0.34
DDX39A-201ENST00000242776 FAM57AQ8TBR7 257 aa12.93□□□□□ -0.34
DDX39A-201ENST00000242776 MCOLN3Q8TDD5 553 aa12.93□□□□□ -0.34
DDX39A-201ENST00000242776 PHF3Q92576 2039 aaKnown RBP12.93□□□□□ -0.34
DDX39A-201ENST00000242776 ZIM3Q96PE6 472 aa12.93□□□□□ -0.34
DDX39A-201ENST00000242776 LPAR4Q99677 370 aa12.93□□□□□ -0.34
DDX39A-201ENST00000242776 AARSD1Q9BTE6 412 aaKnown RBP12.93□□□□□ -0.34
DDX39A-201ENST00000242776 ACBD3Q9H3P7 528 aa12.93□□□□□ -0.34
DDX39A-201ENST00000242776 LIME1Q9H400 295 aa12.93□□□□□ -0.34
DDX39A-201ENST00000242776 VIPAS39Q9H9C1 493 aa12.93□□□□□ -0.34
DDX39A-201ENST00000242776 KCNJ16Q9NPI9 418 aa12.93□□□□□ -0.34
DDX39A-201ENST00000242776 DNAJC13O75165 2243 aa12.92□□□□□ -0.34
DDX39A-201ENST00000242776 FAM95CA0A1B0GW59 222 aa12.92□□□□□ -0.34
DDX39A-201ENST00000242776 FEZF1A0PJY2 475 aa12.92□□□□□ -0.34
DDX39A-201ENST00000242776 GOLGA6L10A6NI86 522 aa12.92□□□□□ -0.34
DDX39A-201ENST00000242776 H0YIG0 161 aa12.92□□□□□ -0.34
DDX39A-201ENST00000242776 TOXO94900 526 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms