RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 ZNF678Q5SXM1 525 aa10.68□□□□□ -0.7
SF3B6-201ENST00000233468 BEND6Q5SZJ8 279 aaPredicted RBP10.68□□□□□ -0.7
SF3B6-201ENST00000233468 ATG14Q6ZNE5 492 aa10.68□□□□□ -0.7
SF3B6-201ENST00000233468 COX15Q7KZN9 410 aa10.68□□□□□ -0.7
SF3B6-201ENST00000233468 BANPQ8N9N5 519 aa10.68□□□□□ -0.7
SF3B6-201ENST00000233468 C7orf57Q8NEG2 295 aa10.68□□□□□ -0.7
SF3B6-201ENST00000233468 MYRIPQ8NFW9 859 aa10.68□□□□□ -0.7
SF3B6-201ENST00000233468 OR2L5Q8NG80 312 aa10.68□□□□□ -0.7
SF3B6-201ENST00000233468 OR7G3Q8NG95 312 aa10.68□□□□□ -0.7
SF3B6-201ENST00000233468 OR9A4Q8NGU2 314 aa10.68□□□□□ -0.7
SF3B6-201ENST00000233468 UTP15Q8TED0 518 aaKnown RBP10.68□□□□□ -0.7
SF3B6-201ENST00000233468 ZNF483Q8TF39 744 aaPredicted RBP10.68□□□□□ -0.7
SF3B6-201ENST00000233468 APOBEC4Q8WW27 367 aaKnown RBP10.68□□□□□ -0.7
SF3B6-201ENST00000233468 METTL21AQ8WXB1 218 aa10.68□□□□□ -0.7
SF3B6-201ENST00000233468 L3HYPDHQ96EM0 354 aa10.68□□□□□ -0.7
SF3B6-201ENST00000233468 FER1L6-AS2Q96M78 137 aa10.68□□□□□ -0.7
SF3B6-201ENST00000233468 ZIM3Q96PE6 472 aa10.68□□□□□ -0.7
SF3B6-201ENST00000233468 KCNC2Q96PR1 638 aa10.68□□□□□ -0.7
SF3B6-201ENST00000233468 OR1F2PQ96R84 312 aa10.68□□□□□ -0.7
SF3B6-201ENST00000233468 MACROD1Q9BQ69 325 aa10.68□□□□□ -0.7
SF3B6-201ENST00000233468 CRB3Q9BUF7 120 aa10.68□□□□□ -0.7
SF3B6-201ENST00000233468 NPLQ9BXD5 320 aaPredicted RBP10.68□□□□□ -0.7
SF3B6-201ENST00000233468 ELOVL6Q9H5J4 265 aa10.68□□□□□ -0.7
SF3B6-201ENST00000233468 SEMA4BQ9NPR2 832 aaPredicted RBP10.68□□□□□ -0.7
SF3B6-201ENST00000233468 SLC22A11Q9NSA0 550 aa10.68□□□□□ -0.7
SF3B6-201ENST00000233468 NMRK1Q9NWW6 199 aa10.68□□□□□ -0.7
SF3B6-201ENST00000233468 ZNF490Q9ULM2 529 aaPredicted RBP10.68□□□□□ -0.7
SF3B6-201ENST00000233468 SNX6Q9UNH7 406 aa10.68□□□□□ -0.7
SF3B6-201ENST00000233468 PLLPQ9Y342 182 aa10.68□□□□□ -0.7
SF3B6-201ENST00000233468 NAALAD2Q9Y3Q0 740 aa10.68□□□□□ -0.7
SF3B6-201ENST00000233468 ACTL7BQ9Y614 415 aa10.68□□□□□ -0.7
SF3B6-201ENST00000233468 SPACA6W5XKT8 324 aa10.68□□□□□ -0.7
SF3B6-201ENST00000233468 SYNDIG1LA6NDD5 238 aa10.67□□□□□ -0.7
SF3B6-201ENST00000233468 SGK494L7N484 410 aa10.67□□□□□ -0.7
SF3B6-201ENST00000233468 FOXE1O00358 373 aaPredicted RBP10.67□□□□□ -0.7
SF3B6-201ENST00000233468 CTIFO43310 598 aaKnown RBP10.67□□□□□ -0.7
SF3B6-201ENST00000233468 B3GALT2O43825 422 aa10.67□□□□□ -0.7
SF3B6-201ENST00000233468 MED26O95402 600 aa10.67□□□□□ -0.7
SF3B6-201ENST00000233468 KRT6AP02538 564 aa10.67□□□□□ -0.7
SF3B6-201ENST00000233468 KRT6BP04259 564 aa10.67□□□□□ -0.7
SF3B6-201ENST00000233468 SBK3P0C264 359 aa10.67□□□□□ -0.7
SF3B6-201ENST00000233468 CD22P20273 847 aa10.67□□□□□ -0.7
SF3B6-201ENST00000233468 OTX2P32243 289 aa10.67□□□□□ -0.7
SF3B6-201ENST00000233468 TSFMP43897 325 aaKnown RBP10.67□□□□□ -0.7
SF3B6-201ENST00000233468 KRT6CP48668 564 aa10.67□□□□□ -0.7
SF3B6-201ENST00000233468 RAP1GDS1P52306 607 aa10.67□□□□□ -0.7
SF3B6-201ENST00000233468 EMP2P54851 167 aa10.67□□□□□ -0.7
SF3B6-201ENST00000233468 PKNOX1P55347 436 aa10.67□□□□□ -0.7
SF3B6-201ENST00000233468 RAB8AP61006 207 aa10.67□□□□□ -0.7
SF3B6-201ENST00000233468 BTN3A2P78410 334 aa10.67□□□□□ -0.7
SF3B6-201ENST00000233468 TLE1Q04724 770 aa10.67□□□□□ -0.7
SF3B6-201ENST00000233468 LCP2Q13094 533 aa10.67□□□□□ -0.7
SF3B6-201ENST00000233468 AP5B1Q2VPB7 878 aa10.67□□□□□ -0.7
SF3B6-201ENST00000233468 ADPRMQ3LIE5 342 aa10.67□□□□□ -0.7
SF3B6-201ENST00000233468 MED25Q71SY5 747 aa10.67□□□□□ -0.7
SF3B6-201ENST00000233468 CCNYL1Q8N7R7 359 aa10.67□□□□□ -0.7
SF3B6-201ENST00000233468 AMER3Q8N944 861 aa10.67□□□□□ -0.7
SF3B6-201ENST00000233468 TMEM102Q8N9M5 508 aaPredicted RBP10.67□□□□□ -0.7
SF3B6-201ENST00000233468 OR51Q1Q8NH59 317 aa10.67□□□□□ -0.7
SF3B6-201ENST00000233468 TRPC4APQ8TEL6 797 aa10.67□□□□□ -0.7
SF3B6-201ENST00000233468 ZNF473Q8WTR7 871 aaKnown RBP10.67□□□□□ -0.7
SF3B6-201ENST00000233468 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.67□□□□□ -0.7
SF3B6-201ENST00000233468 MS4A6EQ96DS6 147 aa10.67□□□□□ -0.7
SF3B6-201ENST00000233468 MOCOSQ96EN8 888 aa10.67□□□□□ -0.7
SF3B6-201ENST00000233468 PGM2Q96G03 612 aa10.67□□□□□ -0.7
SF3B6-201ENST00000233468 SERINC2Q96SA4 455 aa10.67□□□□□ -0.7
SF3B6-201ENST00000233468 ZNF382Q96SR6 550 aa10.67□□□□□ -0.7
SF3B6-201ENST00000233468 SERPINI1Q99574 410 aa10.67□□□□□ -0.7
SF3B6-201ENST00000233468 TBCDQ9BTW9 1192 aa10.67□□□□□ -0.7
SF3B6-201ENST00000233468 SLC25A18Q9H1K4 315 aa10.67□□□□□ -0.7
SF3B6-201ENST00000233468 SOX17Q9H6I2 414 aaPredicted RBP10.67□□□□□ -0.7
SF3B6-201ENST00000233468 SYNPO2LQ9H987 977 aa10.67□□□□□ -0.7
SF3B6-201ENST00000233468 SSU72Q9NP77 194 aaKnown RBP10.67□□□□□ -0.7
SF3B6-201ENST00000233468 OXSMQ9NWU1 459 aa10.67□□□□□ -0.7
SF3B6-201ENST00000233468 AHSPQ9NZD4 102 aa10.67□□□□□ -0.7
SF3B6-201ENST00000233468 CTSFQ9UBX1 484 aa10.67□□□□□ -0.7
SF3B6-201ENST00000233468 C19orf25Q9UFG5 118 aaPredicted RBP10.67□□□□□ -0.7
SF3B6-201ENST00000233468 C3orf18Q9UK00 162 aa10.67□□□□□ -0.7
SF3B6-201ENST00000233468 PPT2Q9UMR5 302 aa10.67□□□□□ -0.7
SF3B6-201ENST00000233468 MRPS33Q9Y291 106 aaKnown RBP10.67□□□□□ -0.7
SF3B6-201ENST00000233468 RNF11Q9Y3C5 154 aa10.67□□□□□ -0.7
SF3B6-201ENST00000233468 LRRC14BA6NHZ5 514 aa10.66□□□□□ -0.7
SF3B6-201ENST00000233468 G3V2L1 256 aa10.66□□□□□ -0.7
SF3B6-201ENST00000233468 OR7A17O14581 309 aa10.66□□□□□ -0.7
SF3B6-201ENST00000233468 PRAMEF4O60810 478 aa10.66□□□□□ -0.7
SF3B6-201ENST00000233468 TRIM13O60858 407 aa10.66□□□□□ -0.7
SF3B6-201ENST00000233468 RDH16O75452 317 aa10.66□□□□□ -0.7
SF3B6-201ENST00000233468 CRCPO75575 148 aa10.66□□□□□ -0.7
SF3B6-201ENST00000233468 BMP10O95393 424 aa10.66□□□□□ -0.7
SF3B6-201ENST00000233468 ENO1P06733 434 aaKnown RBP10.66□□□□□ -0.7
SF3B6-201ENST00000233468 SMIM10L1P0DMW3 83 aa10.66□□□□□ -0.7
SF3B6-201ENST00000233468 RNH1P13489 461 aaKnown RBP10.66□□□□□ -0.7
SF3B6-201ENST00000233468 XCR1P46094 333 aa10.66□□□□□ -0.7
SF3B6-201ENST00000233468 PLA2G16P53816 162 aa10.66□□□□□ -0.7
SF3B6-201ENST00000233468 MTTPP55157 894 aa10.66□□□□□ -0.7
SF3B6-201ENST00000233468 CDH13P55290 713 aa10.66□□□□□ -0.7
SF3B6-201ENST00000233468 AP2B1P63010 937 aa10.66□□□□□ -0.7
SF3B6-201ENST00000233468 ZNF33BQ06732 778 aa10.66□□□□□ -0.7
SF3B6-201ENST00000233468 KLC1Q07866 573 aa10.66□□□□□ -0.7
SF3B6-201ENST00000233468 SRSF1Q07955 248 aaKnown RBP eCLIP10.66□□□□□ -0.77e-7■□□□□ 8.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms