RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 TNFRSF1BP20333 461 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 AOAHP28039 575 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 DNAJA1P31689 397 aaKnown RBP9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 TGFBR2P37173 567 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 SPAM1P38567 509 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 ARHGDIAP52565 204 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 RPP38P78345 283 aaKnown RBP9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 SREBF2Q12772 1141 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 BTN1A1Q13410 526 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 BOP1Q14137 746 aaKnown RBP9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 SUZ12Q15022 739 aaKnown RBP9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 CRTC1Q6UUV9 634 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 FAM131AQ6UXB0 335 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 ARL14EPQ8N8R7 260 aaPredicted RBP9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 FOXJ1Q92949 421 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 VOPP1Q96AW1 172 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 MTERF1Q99551 399 aaKnown RBP9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 SLC29A3Q9BZD2 475 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 MCCC2Q9HCC0 563 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 PSIP1O75475 530 aaKnown RBP9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 DNAJB5O75953 348 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 LAMP1P11279 417 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 PRPS2P11908 318 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 MYL9P24844 172 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 STK19P49842 368 aaPredicted RBP9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 AP1S1P61966 158 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 KEAP1Q14145 624 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 FLYWCH1Q4VC44 716 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 GPAT3Q53EU6 434 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 PDZK1Q5T2W1 519 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 LRRC66Q68CR7 880 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 TXNDC8Q6A555 127 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 SLC8B1Q6J4K2 584 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 PNCKQ6P2M8 343 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 RNF165Q6ZSG1 346 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 TPGS1Q6ZTW0 290 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 TMEM150AQ86TG1 271 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 GLCCI1Q86VQ1 547 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 ENTHD1Q8IYW4 607 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 AKAP1Q92667 903 aaKnown RBP eCLIP9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 TESCQ96BS2 214 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 KCNC2Q96PR1 638 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 APOL4Q9BPW4 351 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 C17orf62Q9BQA9 187 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 CNPPD1Q9BV87 410 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 GABARAPL1Q9H0R8 117 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 SLC35C2Q9NQQ7 365 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 SNTG1Q9NSN8 517 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 THUMPD1Q9NXG2 353 aaKnown RBP9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 MRPS7Q9Y2R9 242 aaKnown RBP9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 MYO10Q9HD67 2058 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 PRR23AA6NEV1 266 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 RECKO95980 971 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 SEMG1P04279 462 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 NTRK1P04629 796 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 POU3F3P20264 500 aaPredicted RBP9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 CD22P20273 847 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 FPR1P21462 350 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 CTSOP43234 321 aaPredicted RBP9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 TGM4P49221 684 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 QPRTQ15274 297 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 TTLL9Q3SXZ7 439 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 SERPINA11Q86U17 422 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 SYT12Q8IV01 421 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 CHCHD4Q8N4Q1 142 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 OR6C4Q8NGE1 309 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 POF1BQ8WVV4 589 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 HHIPQ96QV1 700 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 PPIL3Q9H2H8 161 aaKnown RBP9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 RNF186Q9NXI6 227 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 KCTD5Q9NXV2 234 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 TAS2R16Q9NYV7 291 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 LRFN2Q9ULH4 789 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 A0A1W2PQ09 198 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 METTL15A6NJ78 407 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 PDPK1O15530 556 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 HOXA2O43364 376 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 TLL1O43897 1013 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 GREM1O60565 184 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 GSTM1P09488 218 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 ACPPP15309 386 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 LHCGRP22888 699 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 NSG1P42857 185 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 PTSQ03393 145 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 RUNX1T1Q06455 604 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 NPRL3Q12980 569 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 CHIT1Q13231 466 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 GPR68Q15743 365 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 DUOXA1Q1HG43 343 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 PLEKHG6Q3KR16 790 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 IQCCQ4KMZ1 466 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 KIAA1614Q5VZ46 1190 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 PLET1Q6UQ28 207 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 OTOP2Q7RTS6 562 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 SLC51BQ86UW2 128 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 TSPYL5Q86VY4 417 aaPredicted RBP9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 KBTBD8Q8NFY9 601 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 C2orf15Q8WU43 125 aaKnown RBP9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 ASB12Q8WXK4 309 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 SH3KBP1Q96B97 665 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms