RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 RAD18Q9NS91 495 aa11.13□□□□□ -0.63
DNMT3B-201ENST00000201963 PHF11Q9UIL8 331 aa11.13□□□□□ -0.63
DNMT3B-201ENST00000201963 PCTPQ9UKL6 214 aa11.13□□□□□ -0.63
DNMT3B-201ENST00000201963 CDH7Q9ULB5 785 aa11.13□□□□□ -0.63
DNMT3B-201ENST00000201963 ITM2BQ9Y287 266 aa11.13□□□□□ -0.63
DNMT3B-201ENST00000201963 MEIOCA2RUB1 952 aa11.13□□□□□ -0.63
DNMT3B-201ENST00000201963 CORO1AP31146 461 aaKnown RBP11.13□□□□□ -0.63
DNMT3B-201ENST00000201963 RHAGQ02094 409 aa11.13□□□□□ -0.63
DNMT3B-201ENST00000201963 PCDH1Q08174 1060 aa11.13□□□□□ -0.63
DNMT3B-201ENST00000201963 SELPLGQ14242 412 aa11.13□□□□□ -0.63
DNMT3B-201ENST00000201963 SHQ1Q6PI26 577 aaKnown RBP11.13□□□□□ -0.63
DNMT3B-201ENST00000201963 GEMIN6Q8WXD5 167 aaKnown RBP11.13□□□□□ -0.63
DNMT3B-201ENST00000201963 SUSD6Q92537 303 aa11.13□□□□□ -0.63
DNMT3B-201ENST00000201963 SGCDQ92629 289 aa11.13□□□□□ -0.63
DNMT3B-201ENST00000201963 KCNJ9Q92806 393 aa11.13□□□□□ -0.63
DNMT3B-201ENST00000201963 FUBP1Q96AE4 644 aaKnown RBP11.13□□□□□ -0.63
DNMT3B-201ENST00000201963 CRISPLD2Q9H0B8 497 aa11.13□□□□□ -0.63
DNMT3B-201ENST00000201963 CD84Q9UIB8 345 aa11.13□□□□□ -0.63
DNMT3B-201ENST00000201963 WNT6Q9Y6F9 365 aa11.13□□□□□ -0.63
DNMT3B-201ENST00000201963 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 MTMR11A4FU01 709 aa11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 M0R129 80 aa11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 GBAP04062 536 aa11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 FHP07954 510 aa11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 PUDPQ08623 228 aa11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 C18orf21Q32NC0 220 aaPredicted RBP11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 ADPRMQ3LIE5 342 aa11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 LETMD1Q6P1Q0 360 aa11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 ZNF367Q7RTV3 350 aa11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 LSM14AQ8ND56 463 aaKnown RBP11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 FAM83FQ8NEG4 500 aaPredicted RBP11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 OR4K1Q8NGD4 311 aa11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 SAMD11Q96NU1 681 aa11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 CCDC32Q9BV29 185 aa11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 ZCCHC2Q9C0B9 1178 aaKnown RBP11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 TNKS2Q9H2K2 1166 aa11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 KCNN2Q9H2S1 579 aa11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 HSPE1-MOB4S4R3N1 261 aa11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 ANKRD66B4E2M5 251 aa11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 PIRO00625 290 aa11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 SLC9A3R1O14745 358 aaPredicted RBP11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 WNT9AO14904 365 aa11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 PCDH7O60245 1069 aa11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 RB1P06400 928 aa11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 EBLN1P0CF75 366 aa11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 STOMP27105 288 aa11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 MAD2L1BPQ15013 274 aaPredicted RBP11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 PHOSPHO2Q8TCD6 241 aa11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 SH3RF2Q8TEC5 729 aa11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 POPDC3Q9HBV1 291 aa11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 ZDHHC4Q9NPG8 344 aa11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 HCFC1R1Q9NWW0 138 aa11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 TLR6Q9Y2C9 796 aa11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 CLCA1A8K7I4 914 aa11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 TGM5O43548 720 aa11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 CH25HO95992 272 aa11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 AP2S1P53680 142 aaPredicted RBP11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 CD300CQ08708 224 aa11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 SCAPQ12770 1279 aa11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 CAPN13Q6MZZ7 669 aaPredicted RBP11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 SMARCD3Q6STE5 483 aa11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 C3orf58Q8NDZ4 430 aa11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 FAM46DQ8NEK8 389 aa11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 TMEM80Q96HE8 168 aa11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 CASD1Q96PB1 797 aa11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 DEC1Q9P2X7 70 aa11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 RPS6KB2Q9UBS0 482 aa11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 ARID1BQ8NFD5 2236 aaPredicted RBP11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 RHOP08100 348 aa11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 CELP19835 753 aa11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 TNFRSF1BP20333 461 aa11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 SSTR4P31391 388 aa11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 PIGAP37287 484 aa11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 NSG1P42857 185 aa11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 INAVAQ3KP66 663 aa11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 XKRXQ6PP77 449 aa11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 SLC39A11Q8N1S5 342 aa11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 PIAS4Q8N2W9 510 aaPredicted RBP11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 OR7G1Q8NGA0 311 aa11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 PROKR1Q8TCW9 393 aa11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 RAD51AP1Q96B01 352 aa11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 GTPBP2Q9BX10 602 aaKnown RBP11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 C1QTNF1Q9BXJ1 281 aa11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 OR51V1Q9H2C8 321 aa11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 SMOC2Q9H3U7 446 aa11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 CCSER2Q9H7U1 834 aa11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 MLXQ9UH92 298 aa11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 ABCG2Q9UNQ0 655 aa11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 ASF1AQ9Y294 204 aa11.12□□□□□ -0.63
DNMT3B-201ENST00000201963 A0A1W2PRB8 838 aa11.11□□□□□ -0.63
DNMT3B-201ENST00000201963 CHRNB1P11230 501 aa11.11□□□□□ -0.63
DNMT3B-201ENST00000201963 ACSL1P33121 698 aa11.11□□□□□ -0.63
DNMT3B-201ENST00000201963 VIPR2P41587 438 aa11.11□□□□□ -0.63
DNMT3B-201ENST00000201963 FBXW4P57775 412 aa11.11□□□□□ -0.63
DNMT3B-201ENST00000201963 ADAM15Q13444 863 aa11.11□□□□□ -0.63
DNMT3B-201ENST00000201963 FGFBP1Q14512 234 aa11.11□□□□□ -0.63
DNMT3B-201ENST00000201963 FAAH2Q6GMR7 532 aa11.11□□□□□ -0.63
DNMT3B-201ENST00000201963 PSAPL1Q6NUJ1 521 aa11.11□□□□□ -0.63
DNMT3B-201ENST00000201963 MED27Q6P2C8 311 aa11.11□□□□□ -0.63
DNMT3B-201ENST00000201963 CEP68Q76N32 757 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms