RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Angptl7Q8R1Q3 337 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Scpep1Q920A5 452 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Slc39a5Q9D856 535 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Cldn34b2Q9D9N2 209 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Cldn8Q9Z260 225 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Scgb2b17S4R2V3 82 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Ect2lA0A140LIP2 953 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Gm29394H3BIW7 199 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Olfr237-ps1K9J725 310 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Olfr1121L7MTT1 314 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Sh3yl1O08641 340 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Tk1P04184 233 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Cma1P21844 247 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Ppm1bP36993 390 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Flt3lgP49772 232 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Adra1bP97717 514 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Sox4Q06831 440 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Tgtp2Q3T9E4 415 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Fbxw18Q3TSA9 469 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Syndig1lQ3USQ7 237 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Tgtp1Q62293 415 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 PtprjQ64455 1238 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Atp11bQ6DFW5 1175 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Serpina3aQ6P4P1 422 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Spata7Q80VP2 582 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Cars2Q8BYM8 551 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Tmsb15lQ8C0W0 80 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 H2afy2Q8CCK0 372 aaKnown RBP9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Olfr586Q8VH13 317 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Q9D1F3 157 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 4930578G10RikQ9D4Q4 153 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Tmem269Q9D4Y8 254 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Ndufv2Q9D6J6 248 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Wwp2Q9DBH0 870 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Xrn2Q9DBR1 951 aaKnown RBP9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Ing1Q9QXV3 279 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 DstnQ9R0P5 165 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Unc13cQ8K0T7 2210 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Gm37596A0A0A6YXL2 336 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Slc43a3A2AVZ9 502 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Btbd35f28A2CFD5 498 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Olfr543E9PWI5 336 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Olfr549E9Q542 316 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Btbd35f30J3QML3 498 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Htr3aP23979 487 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 DcnP28654 354 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Nat1P50294 290 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Bmp1P98063 991 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Rars2Q3U186 578 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Tex10Q3URQ0 928 aaKnown RBP9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Cdk6Q64261 326 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Tmc6Q7TN60 810 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 BspryQ80YW5 473 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Pp2d1Q8BVT6 620 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Pomgnt2Q8BW41 605 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Bbs4Q8C1Z7 520 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Ston1Q8CDJ8 730 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Cox10Q8CFY5 443 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Piwil4Q8CGT6 848 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 TrhdeQ8K093 1025 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Coq9Q8K1Z0 313 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Ddx52Q8K301 598 aaKnown RBP9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Mettl22Q8R1C6 393 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Olfr448Q8VES9 310 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Olfr561Q8VGZ6 314 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Cxxc5Q91WA4 317 aaKnown RBP9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Mgme1Q9CXC3 338 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Il1rl2Q9ERS7 574 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Tgm1Q9JLF6 815 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Plce1Q8K4S1 2282 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Gm7792A0A0J9YU01 481 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 A0A286YCD0 109 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Gm3183D3YUJ6 481 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Olfr891E9Q843 316 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Gm3139J3QK78 481 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Gm3106J3QPH3 481 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Vmn2r97K7N6Z2 861 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Vmn2r93L7N1Z9 857 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Clk3O35492 638 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Tssk2O54863 358 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 ThP24529 498 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Cd9P40240 226 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Gabarapl2P60521 117 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Rps7P62082 194 aaKnown RBP9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Rpl10lP86048 214 aaKnown RBP9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 FukQ7TMC8 1090 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Q810M1 233 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Ostm1Q8BGT0 338 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Atl1Q8BH66 558 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Atp6v1hQ8BVE3 483 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Adap2Q8R2V5 381 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Mterf3Q8R3J4 412 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Ttc9bQ9D6E4 239 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Dpysl5Q9EQF6 564 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Alkal1J3QPP8 127 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Gm6356L7N2A7 188 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Gosr2O35166 212 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 PdynO35417 248 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 C1dO35473 141 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Slc6a2O55192 617 aa9.37□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 22.6 ms