RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Adamts13Q769J6 1426 aa11.58□□□□□ -0.56
Trim56-201ENSMUST00000054384 Rpl7a-ps3A0A140T8L1 270 aa11.58□□□□□ -0.56
Trim56-201ENSMUST00000054384 H2-Q10P01898 325 aa11.58□□□□□ -0.56
Trim56-201ENSMUST00000054384 GscQ02591 256 aa11.58□□□□□ -0.56
Trim56-201ENSMUST00000054384 Gpat2Q14DK4 801 aa11.58□□□□□ -0.56
Trim56-201ENSMUST00000054384 Rhox10Q4TU83 196 aa11.58□□□□□ -0.56
Trim56-201ENSMUST00000054384 BC024139Q8BVJ3 772 aa11.58□□□□□ -0.56
Trim56-201ENSMUST00000054384 Rdh12Q8BYK4 316 aa11.58□□□□□ -0.56
Trim56-201ENSMUST00000054384 MlycdQ99J39 492 aa11.58□□□□□ -0.56
Trim56-201ENSMUST00000054384 NaxdQ9CZ42 343 aa11.58□□□□□ -0.56
Trim56-201ENSMUST00000054384 SerhlQ9EPB5 311 aa11.58□□□□□ -0.56
Trim56-201ENSMUST00000054384 Gm5538W4VSP6 401 aa11.58□□□□□ -0.56
Trim56-201ENSMUST00000054384 Smok4aA0JLX3 433 aa11.58□□□□□ -0.56
Trim56-201ENSMUST00000054384 Zfp282E9PVC2 666 aa11.58□□□□□ -0.56
Trim56-201ENSMUST00000054384 Chrm1P12657 460 aa11.58□□□□□ -0.56
Trim56-201ENSMUST00000054384 Gstm3P19639 218 aa11.58□□□□□ -0.56
Trim56-201ENSMUST00000054384 Ido1P28776 407 aaKnown RBP11.58□□□□□ -0.56
Trim56-201ENSMUST00000054384 Tead2P48301 445 aa11.58□□□□□ -0.56
Trim56-201ENSMUST00000054384 6430531B16RikQ3V2J1 307 aa11.58□□□□□ -0.56
Trim56-201ENSMUST00000054384 Rad54bQ6PFE3 886 aa11.58□□□□□ -0.56
Trim56-201ENSMUST00000054384 FarsaQ8C0C7 508 aa11.58□□□□□ -0.56
Trim56-201ENSMUST00000054384 Tsga8Q9JJL0 238 aa11.58□□□□□ -0.56
Trim56-201ENSMUST00000054384 Vmn2r12L7N217 831 aa11.58□□□□□ -0.56
Trim56-201ENSMUST00000054384 Gsg1l2M0QWL6 290 aa11.58□□□□□ -0.56
Trim56-201ENSMUST00000054384 Rps3aP97351 264 aaKnown RBP11.58□□□□□ -0.56
Trim56-201ENSMUST00000054384 Sox4Q06831 440 aa11.58□□□□□ -0.56
Trim56-201ENSMUST00000054384 Avl9Q80U56 649 aa11.58□□□□□ -0.56
Trim56-201ENSMUST00000054384 Mgat4bQ812F8 548 aa11.58□□□□□ -0.56
Trim56-201ENSMUST00000054384 Npas4Q8BGD7 802 aa11.58□□□□□ -0.56
Trim56-201ENSMUST00000054384 Ttll11A4Q9F4 727 aa11.58□□□□□ -0.56
Trim56-201ENSMUST00000054384 Pde7aP70453 456 aa11.58□□□□□ -0.56
Trim56-201ENSMUST00000054384 Med26Q7TN02 588 aa11.58□□□□□ -0.56
Trim56-201ENSMUST00000054384 Defb19Q8K3I8 83 aa11.58□□□□□ -0.56
Trim56-201ENSMUST00000054384 Msantd3Q9CR78 275 aa11.58□□□□□ -0.56
Trim56-201ENSMUST00000054384 Mecp2Q9Z2D6 484 aaKnown RBP11.58□□□□□ -0.56
Trim56-201ENSMUST00000054384 Trbv4A0A075B5I2 113 aa11.58□□□□□ -0.56
Trim56-201ENSMUST00000054384 Eif2b3B1AUN2 452 aaKnown RBP11.58□□□□□ -0.56
Trim56-201ENSMUST00000054384 Zfp871G5E905 615 aa11.58□□□□□ -0.56
Trim56-201ENSMUST00000054384 Pxmp2P42925 194 aa11.58□□□□□ -0.56
Trim56-201ENSMUST00000054384 Hdac2P70288 488 aa11.58□□□□□ -0.56
Trim56-201ENSMUST00000054384 Tgoln1Q62313 353 aa11.58□□□□□ -0.56
Trim56-201ENSMUST00000054384 Znf668Q8K2R5 619 aa11.58□□□□□ -0.56
Trim56-201ENSMUST00000054384 Olfr273Q8VG87 317 aa11.58□□□□□ -0.56
Trim56-201ENSMUST00000054384 Isoc1Q91V64 297 aa11.58□□□□□ -0.56
Trim56-201ENSMUST00000054384 Grip1Q925T6 1127 aa11.58□□□□□ -0.56
Trim56-201ENSMUST00000054384 Rai2Q9QVY8 529 aa11.58□□□□□ -0.56
Trim56-201ENSMUST00000054384 Rhox6O70238 227 aa11.58□□□□□ -0.56
Trim56-201ENSMUST00000054384 Zfp37P17141 594 aa11.58□□□□□ -0.56
Trim56-201ENSMUST00000054384 Pcsk2P21661 637 aa11.58□□□□□ -0.56
Trim56-201ENSMUST00000054384 Timm8bP62077 83 aaKnown RBP11.58□□□□□ -0.56
Trim56-201ENSMUST00000054384 Sec31bQ3TZ89 1158 aa11.58□□□□□ -0.56
Trim56-201ENSMUST00000054384 Olfr1299Q7TQX5 312 aa11.58□□□□□ -0.56
Trim56-201ENSMUST00000054384 Prap1Q80XD8 149 aa11.58□□□□□ -0.56
Trim56-201ENSMUST00000054384 Olfr599Q8VG01 315 aa11.58□□□□□ -0.56
Trim56-201ENSMUST00000054384 Nprl3Q8VIJ8 569 aa11.58□□□□□ -0.56
Trim56-201ENSMUST00000054384 Ctu1Q99J10 420 aa11.58□□□□□ -0.56
Trim56-201ENSMUST00000054384 A0A286YCQ8 80 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Zfp982A2A8Q4 368 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Gm9008E9PVG0 424 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Vmn2r22E9Q7S8 853 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Cyp1a1P00184 524 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 OxtrP97926 388 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 MafkQ61827 156 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Tmem198Q8BG75 360 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 E330021D16RikQ8BW45 371 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Esrp2Q8K0G8 717 aaKnown RBP11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Tmem9Q9CR23 183 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Ralgps2Q9ERD6 590 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Slc29a1Q9JIM1 460 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 B4galt4Q9JJ04 344 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 PolhQ9JJN0 694 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Clec4eQ9R0Q8 214 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 CskP41241 450 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 AftphQ80WT5 931 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 BoraQ8BS90 525 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 NaprtQ8CC86 538 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Olfr539Q8VGL9 319 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 MynnQ99MD8 610 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Noa1Q9JJG9 693 aaKnown RBP11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Cst9Q9Z0H6 137 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Spin2gA0A0N4SW15 236 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Spin2eJ3QNQ0 234 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 HlxQ61670 476 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 DgkbQ6NS52 802 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Ccm2Q8K2Y9 453 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Lmcd1Q8VEE1 365 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Gpr37l1Q99JG2 481 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Rassf1Q99MK9 340 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 RhagQ9QUT0 438 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Bag6Q9Z1R2 1154 aaKnown RBP11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 HnrnpfQ9Z2X1 415 aaKnown RBP11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Itga5P11688 1053 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 SgcbP82349 320 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Sox14Q04892 240 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Vmn1r74Q8R290 304 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Barhl2Q8VIB5 384 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Ogfod2Q9CQ04 349 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Copz2Q9JHH9 205 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 PrelpQ9JK53 378 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Atxn7l3A2AWT3 347 aa11.57□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 24.2 ms