RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 HOXD11P31277 338 aaPredicted RBP11.7□□□□□ -0.54
LINC00339-213ENST00000642137 BSGP35613 385 aa11.7□□□□□ -0.54
LINC00339-213ENST00000642137 RAP1GDS1P52306 607 aa11.7□□□□□ -0.54
LINC00339-213ENST00000642137 PLA2G16P53816 162 aa11.7□□□□□ -0.54
LINC00339-213ENST00000642137 AQP5P55064 265 aa11.7□□□□□ -0.54
LINC00339-213ENST00000642137 SKP1P63208 163 aa11.7□□□□□ -0.54
LINC00339-213ENST00000642137 NR6A1Q15406 480 aa11.7□□□□□ -0.54
LINC00339-213ENST00000642137 SLC9B1Q4ZJI4 515 aa11.7□□□□□ -0.54
LINC00339-213ENST00000642137 SPIN4Q56A73 249 aa11.7□□□□□ -0.54
LINC00339-213ENST00000642137 C3orf38Q5JPI3 329 aa11.7□□□□□ -0.54
LINC00339-213ENST00000642137 SPDYAQ5MJ70 313 aa11.7□□□□□ -0.54
LINC00339-213ENST00000642137 C6orf136Q5SQH8 315 aa11.7□□□□□ -0.54
LINC00339-213ENST00000642137 CGB2Q6NT52 195 aa11.7□□□□□ -0.54
LINC00339-213ENST00000642137 IGF2-ASQ6U949 168 aa11.7□□□□□ -0.54
LINC00339-213ENST00000642137 LARP4Q71RC2 724 aaKnown RBP eCLIP11.7□□□□□ -0.54
LINC00339-213ENST00000642137 PAGE2Q7Z2X7 111 aa11.7□□□□□ -0.54
LINC00339-213ENST00000642137 MAVSQ7Z434 540 aa11.7□□□□□ -0.54
LINC00339-213ENST00000642137 CPLX4Q7Z7G2 160 aa11.7□□□□□ -0.54
LINC00339-213ENST00000642137 ZFAND4Q86XD8 727 aa11.7□□□□□ -0.54
LINC00339-213ENST00000642137 TMEM126BQ8IUX1 230 aa11.7□□□□□ -0.54
LINC00339-213ENST00000642137 PARP9Q8IXQ6 854 aa11.7□□□□□ -0.54
LINC00339-213ENST00000642137 CEP70Q8NHQ1 597 aa11.7□□□□□ -0.54
LINC00339-213ENST00000642137 ACTRT2Q8TDY3 377 aa11.7□□□□□ -0.54
LINC00339-213ENST00000642137 TUBGCP3Q96CW5 907 aa11.7□□□□□ -0.54
LINC00339-213ENST00000642137 C11orf24Q96F05 449 aaPredicted RBP11.7□□□□□ -0.54
LINC00339-213ENST00000642137 APIPQ96GX9 242 aa11.7□□□□□ -0.54
LINC00339-213ENST00000642137 C10orf90Q96M02 699 aa11.7□□□□□ -0.54
LINC00339-213ENST00000642137 QRFPRQ96P65 431 aa11.7□□□□□ -0.54
LINC00339-213ENST00000642137 KCNC2Q96PR1 638 aa11.7□□□□□ -0.54
LINC00339-213ENST00000642137 CTRCQ99895 268 aa11.7□□□□□ -0.54
LINC00339-213ENST00000642137 CCDC28BQ9BUN5 200 aa11.7□□□□□ -0.54
LINC00339-213ENST00000642137 MRPL1Q9BYD6 325 aaKnown RBP11.7□□□□□ -0.54
LINC00339-213ENST00000642137 SLC7A5P2Q9GIP4 190 aa11.7□□□□□ -0.54
LINC00339-213ENST00000642137 NRSN2Q9GZP1 204 aa11.7□□□□□ -0.54
LINC00339-213ENST00000642137 NSRP1Q9H0G5 558 aaKnown RBP11.7□□□□□ -0.54
LINC00339-213ENST00000642137 DDX31Q9H8H2 851 aaKnown RBP11.7□□□□□ -0.54
LINC00339-213ENST00000642137 AKTIPQ9H8T0 292 aa11.7□□□□□ -0.54
LINC00339-213ENST00000642137 ACTR5Q9H9F9 607 aaPredicted RBP11.7□□□□□ -0.54
LINC00339-213ENST00000642137 LRTM1Q9HBL6 345 aa11.7□□□□□ -0.54
LINC00339-213ENST00000642137 ANKHQ9HCJ1 492 aa11.7□□□□□ -0.54
LINC00339-213ENST00000642137 NPHS2Q9NP85 383 aa11.7□□□□□ -0.54
LINC00339-213ENST00000642137 KLHL14Q9P2G3 628 aa11.7□□□□□ -0.54
LINC00339-213ENST00000642137 CDC14AQ9UNH5 594 aa11.7□□□□□ -0.54
LINC00339-213ENST00000642137 TMED5Q9Y3A6 229 aa11.7□□□□□ -0.54
LINC00339-213ENST00000642137 ATP6AP2A0A1C7CYW4 349 aa11.69□□□□□ -0.54
LINC00339-213ENST00000642137 H0YIG0 161 aa11.69□□□□□ -0.54
LINC00339-213ENST00000642137 SAP18O00422 153 aaKnown RBP11.69□□□□□ -0.54
LINC00339-213ENST00000642137 NVLO15381 856 aaKnown RBP11.69□□□□□ -0.54
LINC00339-213ENST00000642137 GALR3O60755 368 aaPredicted RBP11.69□□□□□ -0.54
LINC00339-213ENST00000642137 PEX11AO75192 247 aa11.69□□□□□ -0.54
LINC00339-213ENST00000642137 ATP6AP2O75787 350 aa11.69□□□□□ -0.54
LINC00339-213ENST00000642137 SCELO95171 688 aa11.69□□□□□ -0.54
LINC00339-213ENST00000642137 MED26O95402 600 aa11.69□□□□□ -0.54
LINC00339-213ENST00000642137 TIAF1O95411 115 aa11.69□□□□□ -0.54
LINC00339-213ENST00000642137 NSA2O95478 260 aaKnown RBP11.69□□□□□ -0.54
LINC00339-213ENST00000642137 PCSK2P16519 638 aa11.69□□□□□ -0.54
LINC00339-213ENST00000642137 LBPP18428 481 aa11.69□□□□□ -0.54
LINC00339-213ENST00000642137 ALAS2P22557 587 aa11.69□□□□□ -0.54
LINC00339-213ENST00000642137 ATP5A1P25705 553 aaKnown RBP11.69□□□□□ -0.54
LINC00339-213ENST00000642137 AVPR1BP47901 424 aa11.69□□□□□ -0.54
LINC00339-213ENST00000642137 IDH3AP50213 366 aa11.69□□□□□ -0.54
LINC00339-213ENST00000642137 MTTPP55157 894 aa11.69□□□□□ -0.54
LINC00339-213ENST00000642137 RAB8AP61006 207 aa11.69□□□□□ -0.54
LINC00339-213ENST00000642137 BTN3A2P78410 334 aa11.69□□□□□ -0.54
LINC00339-213ENST00000642137 EMX2Q04743 252 aa11.69□□□□□ -0.54
LINC00339-213ENST00000642137 ACSM2AQ08AH3 577 aa11.69□□□□□ -0.54
LINC00339-213ENST00000642137 MAD2L1Q13257 205 aaPredicted RBP11.69□□□□□ -0.54
LINC00339-213ENST00000642137 CAMK2BQ13554 666 aa11.69□□□□□ -0.54
LINC00339-213ENST00000642137 ATP6AP1LQ52LC2 224 aa11.69□□□□□ -0.54
LINC00339-213ENST00000642137 RFTN2Q52LD8 501 aaPredicted RBP11.69□□□□□ -0.54
LINC00339-213ENST00000642137 VWA5B1Q5TIE3 1220 aa11.69□□□□□ -0.54
LINC00339-213ENST00000642137 PRAMEF17Q5VTA0 474 aa11.69□□□□□ -0.54
LINC00339-213ENST00000642137 ACSM2BQ68CK6 577 aa11.69□□□□□ -0.54
LINC00339-213ENST00000642137 PRMT9Q6P2P2 845 aa11.69□□□□□ -0.54
LINC00339-213ENST00000642137 GALNT18Q6P9A2 607 aa11.69□□□□□ -0.54
LINC00339-213ENST00000642137 FOXR1Q6PIV2 292 aa11.69□□□□□ -0.54
LINC00339-213ENST00000642137 TTLL10Q6ZVT0 673 aa11.69□□□□□ -0.54
LINC00339-213ENST00000642137 ACAD11Q709F0 780 aa11.69□□□□□ -0.54
LINC00339-213ENST00000642137 DGLUCYQ7Z3D6 616 aa11.69□□□□□ -0.54
LINC00339-213ENST00000642137 ZCCHC7Q8N3Z6 543 aaKnown RBP11.69□□□□□ -0.54
LINC00339-213ENST00000642137 C1orf52Q8N6N3 182 aaKnown RBP11.69□□□□□ -0.54
LINC00339-213ENST00000642137 RFWD2Q8NHY2 731 aa11.69□□□□□ -0.54
LINC00339-213ENST00000642137 PROKR1Q8TCW9 393 aa11.69□□□□□ -0.54
LINC00339-213ENST00000642137 PPP1R36Q96LQ0 422 aa11.69□□□□□ -0.54
LINC00339-213ENST00000642137 LRFN5Q96NI6 719 aa11.69□□□□□ -0.54
LINC00339-213ENST00000642137 SLC46A1Q96NT5 459 aa11.69□□□□□ -0.54
LINC00339-213ENST00000642137 SERINC2Q96SA4 455 aa11.69□□□□□ -0.54
LINC00339-213ENST00000642137 NPLQ9BXD5 320 aaPredicted RBP11.69□□□□□ -0.54
LINC00339-213ENST00000642137 ZNF717Q9BY31 904 aaPredicted RBP11.69□□□□□ -0.54
LINC00339-213ENST00000642137 SPRY4Q9C004 299 aa11.69□□□□□ -0.54
LINC00339-213ENST00000642137 WDR55Q9H6Y2 383 aaPredicted RBP11.69□□□□□ -0.54
LINC00339-213ENST00000642137 TXLNGQ9NUQ3 528 aa11.69□□□□□ -0.54
LINC00339-213ENST00000642137 MCM8Q9UJA3 840 aa11.69□□□□□ -0.54
LINC00339-213ENST00000642137 MRPS2Q9Y399 296 aaKnown RBP11.69□□□□□ -0.54
LINC00339-213ENST00000642137 B3GALT1Q9Y5Z6 326 aa11.69□□□□□ -0.54
LINC00339-213ENST00000642137 CEP250Q9BV73 2442 aa11.69□□□□□ -0.54
LINC00339-213ENST00000642137 CNOT1A5YKK6 2376 aaKnown RBP11.69□□□□□ -0.54
LINC00339-213ENST00000642137 GOLGA8QA0A0J9YX86 632 aa11.68□□□□□ -0.54
LINC00339-213ENST00000642137 GOLGA8OA6NCC3 632 aa11.68□□□□□ -0.54
LINC00339-213ENST00000642137 C9orf172C9J069 976 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms