RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-233	ENST00000642021	C6orf47	O95873	294 aa		13.27	□□□□□ -0.28
PHGDH-233	ENST00000642021	RPLP0	P05388	317 aa	Known RBP	13.27	□□□□□ -0.28
PHGDH-233	ENST00000642021	IMPA1	P29218	277 aa		13.27	□□□□□ -0.28
PHGDH-233	ENST00000642021	PDHA2	P29803	388 aa		13.27	□□□□□ -0.28
PHGDH-233	ENST00000642021	RGS6	P49758	472 aa		13.27	□□□□□ -0.28
PHGDH-233	ENST00000642021	TP53BP2	Q13625	1128 aa		13.27	□□□□□ -0.28
PHGDH-233	ENST00000642021	MICA	Q29983	383 aa		13.27	□□□□□ -0.28
PHGDH-233	ENST00000642021	PRSS53	Q2L4Q9	553 aa		13.27	□□□□□ -0.28
PHGDH-233	ENST00000642021	MPEG1	Q2M385	716 aa		13.27	□□□□□ -0.28
PHGDH-233	ENST00000642021	MPP7	Q5T2T1	576 aa		13.27	□□□□□ -0.28
PHGDH-233	ENST00000642021	CAMKMT	Q7Z624	323 aa		13.27	□□□□□ -0.28
PHGDH-233	ENST00000642021	SYTL1	Q8IYJ3	562 aa		13.27	□□□□□ -0.28
PHGDH-233	ENST00000642021	NFKBID	Q8NI38	313 aa		13.27	□□□□□ -0.28
PHGDH-233	ENST00000642021	NEIL2	Q969S2	332 aa		13.27	□□□□□ -0.28
PHGDH-233	ENST00000642021	NACC2	Q96BF6	587 aa		13.27	□□□□□ -0.28
PHGDH-233	ENST00000642021	OR5M11	Q96RB7	305 aa		13.27	□□□□□ -0.28
PHGDH-233	ENST00000642021	PKP4	Q99569	1192 aa		13.27	□□□□□ -0.28
PHGDH-233	ENST00000642021	TCF25	Q9BQ70	676 aa		13.27	□□□□□ -0.28
PHGDH-233	ENST00000642021	SP140L	Q9H930	580 aa		13.27	□□□□□ -0.28
PHGDH-233	ENST00000642021	CPNE5	Q9HCH3	593 aa		13.27	□□□□□ -0.28
PHGDH-233	ENST00000642021	ANKH	Q9HCJ1	492 aa		13.27	□□□□□ -0.28
PHGDH-233	ENST00000642021	TRIM39	Q9HCM9	518 aa		13.27	□□□□□ -0.28
PHGDH-233	ENST00000642021	MS4A12	Q9NXJ0	267 aa		13.27	□□□□□ -0.28
PHGDH-233	ENST00000642021	PCDHGA3	Q9Y5H0	932 aa		13.27	□□□□□ -0.28
PHGDH-233	ENST00000642021	CFAP20	Q9Y6A4	193 aa	Known RBP	13.27	□□□□□ -0.28
PHGDH-233	ENST00000642021	TAF4	O00268	1085 aa		13.27	□□□□□ -0.29
PHGDH-233	ENST00000642021	POP4	O95707	220 aa	Known RBP	13.27	□□□□□ -0.29
PHGDH-233	ENST00000642021	HNF4A	P41235	474 aa		13.27	□□□□□ -0.29
PHGDH-233	ENST00000642021	SPOUT1	Q5T280	376 aa	Known RBP	13.27	□□□□□ -0.29
PHGDH-233	ENST00000642021	C10orf62	Q5T681	223 aa	Predicted RBP	13.27	□□□□□ -0.29
PHGDH-233	ENST00000642021	ZNF605	Q86T29	641 aa		13.27	□□□□□ -0.29
PHGDH-233	ENST00000642021	PEX5L	Q8IYB4	626 aa		13.27	□□□□□ -0.29
PHGDH-233	ENST00000642021	CPXM2	Q8N436	756 aa		13.27	□□□□□ -0.29
PHGDH-233	ENST00000642021	STX19	Q8N4C7	294 aa		13.27	□□□□□ -0.29
PHGDH-233	ENST00000642021	OR5AK3P	Q8NH89	298 aa		13.27	□□□□□ -0.29
PHGDH-233	ENST00000642021	GTPBP3	Q969Y2	492 aa	Known RBP	13.27	□□□□□ -0.29
PHGDH-233	ENST00000642021	RAD9A	Q99638	391 aa		13.27	□□□□□ -0.29
PHGDH-233	ENST00000642021	RIOK2	Q9BVS4	552 aa	Known RBP	13.27	□□□□□ -0.29
PHGDH-233	ENST00000642021	SPATA9	Q9BWV2	254 aa		13.27	□□□□□ -0.29
PHGDH-233	ENST00000642021	CPEB1	Q9BZB8	566 aa	Known RBP	13.27	□□□□□ -0.29
PHGDH-233	ENST00000642021	SH2B3	Q9UQQ2	575 aa		13.27	□□□□□ -0.29
PHGDH-233	ENST00000642021	PRAMEF33	A0A0G2JMD5	474 aa		13.26	□□□□□ -0.29
PHGDH-233	ENST00000642021	ISPD	A4D126	451 aa		13.26	□□□□□ -0.29
PHGDH-233	ENST00000642021	PRAMEF10	O60809	474 aa		13.26	□□□□□ -0.29
PHGDH-233	ENST00000642021	DLGAP3	O95886	979 aa		13.26	□□□□□ -0.29
PHGDH-233	ENST00000642021	TIA1	P31483	386 aa	Known RBP eCLIP	13.26	□□□□□ -0.29
PHGDH-233	ENST00000642021	ASMT	P46597	345 aa		13.26	□□□□□ -0.29
PHGDH-233	ENST00000642021	SP3	Q02447	781 aa		13.26	□□□□□ -0.29
PHGDH-233	ENST00000642021	TEAD4	Q15561	434 aa		13.26	□□□□□ -0.29
PHGDH-233	ENST00000642021	ATAD3B	Q5T9A4	648 aa		13.26	□□□□□ -0.29
PHGDH-233	ENST00000642021	ANXA8L1	Q5VT79	327 aa		13.26	□□□□□ -0.29
PHGDH-233	ENST00000642021	FAM180B	Q6P0A1	224 aa		13.26	□□□□□ -0.29
PHGDH-233	ENST00000642021	METTL3	Q86U44	580 aa	Known RBP	13.26	□□□□□ -0.29
PHGDH-233	ENST00000642021	HEATR4	Q86WZ0	1026 aa		13.26	□□□□□ -0.29
PHGDH-233	ENST00000642021	TCEAL8	Q8IYN2	117 aa		13.26	□□□□□ -0.29
PHGDH-233	ENST00000642021	CYP4Z2P	Q8N1L4	340 aa		13.26	□□□□□ -0.29
PHGDH-233	ENST00000642021	AMER2	Q8N7J2	671 aa		13.26	□□□□□ -0.29
PHGDH-233	ENST00000642021	PSD4	Q8NDX1	1056 aa		13.26	□□□□□ -0.29
PHGDH-233	ENST00000642021	B3GNT7	Q8NFL0	401 aa		13.26	□□□□□ -0.29
PHGDH-233	ENST00000642021	MAGEB10	Q96LZ2	347 aa	Predicted RBP	13.26	□□□□□ -0.29
PHGDH-233	ENST00000642021	SLC35A5	Q9BS91	424 aa		13.26	□□□□□ -0.29
PHGDH-233	ENST00000642021	BRF2	Q9HAW0	419 aa		13.26	□□□□□ -0.29
PHGDH-233	ENST00000642021	C1GALT1	Q9NS00	363 aa		13.26	□□□□□ -0.29
PHGDH-233	ENST00000642021	ACER3	Q9NUN7	267 aa		13.26	□□□□□ -0.29
PHGDH-233	ENST00000642021	RHCG	Q9UBD6	479 aa		13.26	□□□□□ -0.29
PHGDH-233	ENST00000642021	SRRD	Q9UH36	339 aa		13.26	□□□□□ -0.29
PHGDH-233	ENST00000642021	IFT52	Q9Y366	437 aa		13.26	□□□□□ -0.29
PHGDH-233	ENST00000642021	UGT2A1	Q9Y4X1	527 aa		13.26	□□□□□ -0.29
PHGDH-233	ENST00000642021	SCN5A	Q14524	2016 aa		13.26	□□□□□ -0.29
PHGDH-233	ENST00000642021	RNASET2	O00584	256 aa	Known RBP	13.26	□□□□□ -0.29
PHGDH-233	ENST00000642021	CTSA	P10619	480 aa		13.26	□□□□□ -0.29
PHGDH-233	ENST00000642021	ANXA8	P13928	327 aa		13.26	□□□□□ -0.29
PHGDH-233	ENST00000642021	NKX2-5	P52952	324 aa	Predicted RBP	13.26	□□□□□ -0.29
PHGDH-233	ENST00000642021	ZNF33B	Q06732	778 aa		13.26	□□□□□ -0.29
PHGDH-233	ENST00000642021	KCNC3	Q14003	757 aa		13.26	□□□□□ -0.29
PHGDH-233	ENST00000642021	SCARB2	Q14108	478 aa		13.26	□□□□□ -0.29
PHGDH-233	ENST00000642021	IRF3	Q14653	427 aa		13.26	□□□□□ -0.29
PHGDH-233	ENST00000642021	GANAB	Q14697	944 aa	Known RBP	13.26	□□□□□ -0.29
PHGDH-233	ENST00000642021	ZNF181	Q2M3W8	571 aa		13.26	□□□□□ -0.29
PHGDH-233	ENST00000642021	IFI44L	Q53G44	452 aa		13.26	□□□□□ -0.29
PHGDH-233	ENST00000642021	DESI1	Q6ICB0	168 aa		13.26	□□□□□ -0.29
PHGDH-233	ENST00000642021	TMEM25	Q86YD3	366 aa		13.26	□□□□□ -0.29
PHGDH-233	ENST00000642021	METTL4	Q8N3J2	472 aa		13.26	□□□□□ -0.29
PHGDH-233	ENST00000642021	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	13.26	□□□□□ -0.29
PHGDH-233	ENST00000642021	COL21A1	Q96P44	957 aa		13.26	□□□□□ -0.29
PHGDH-233	ENST00000642021	SLC7A5P2	Q9GIP4	190 aa		13.26	□□□□□ -0.29
PHGDH-233	ENST00000642021	ROGDI	Q9GZN7	287 aa		13.26	□□□□□ -0.29
PHGDH-233	ENST00000642021	IRF2BPL	Q9H1B7	796 aa		13.26	□□□□□ -0.29
PHGDH-233	ENST00000642021	ZNF282	Q9UDV7	671 aa	Predicted RBP	13.26	□□□□□ -0.29
PHGDH-233	ENST00000642021	POFUT2	Q9Y2G5	429 aa		13.26	□□□□□ -0.29
PHGDH-233	ENST00000642021	MAP4K5	Q9Y4K4	846 aa		13.26	□□□□□ -0.29
PHGDH-233	ENST00000642021	KPNA5	O15131	536 aa		13.26	□□□□□ -0.29
PHGDH-233	ENST00000642021	KLHL18	O94889	574 aa		13.26	□□□□□ -0.29
PHGDH-233	ENST00000642021	OXSR1	O95747	527 aa	Predicted RBP	13.26	□□□□□ -0.29
PHGDH-233	ENST00000642021	PPIB	P23284	216 aa	Known RBP	13.26	□□□□□ -0.29
PHGDH-233	ENST00000642021	PTGES3	Q15185	160 aa	Known RBP	13.26	□□□□□ -0.29
PHGDH-233	ENST00000642021	BCL2A1	Q16548	175 aa		13.26	□□□□□ -0.29
PHGDH-233	ENST00000642021	CLIP4	Q8N3C7	705 aa		13.26	□□□□□ -0.29
PHGDH-233	ENST00000642021	RASGEF1A	Q8N9B8	481 aa		13.26	□□□□□ -0.29
PHGDH-233	ENST00000642021	OR2A12	Q8NGT7	310 aa		13.26	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms