RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	GPR78	Q96P69	363 aa		14.18	□□□□□ -0.14
PHGDH-231	ENST00000641939	TUBB6	Q9BUF5	446 aa		14.18	□□□□□ -0.14
PHGDH-231	ENST00000641939	RBCK1	Q9BYM8	510 aa		14.18	□□□□□ -0.14
PHGDH-231	ENST00000641939	AICDA	Q9GZX7	198 aa		14.18	□□□□□ -0.14
PHGDH-231	ENST00000641939	CLMP	Q9H6B4	373 aa		14.18	□□□□□ -0.14
PHGDH-231	ENST00000641939	SLAMF7	Q9NQ25	335 aa		14.18	□□□□□ -0.14
PHGDH-231	ENST00000641939	LANCL2	Q9NS86	450 aa		14.18	□□□□□ -0.14
PHGDH-231	ENST00000641939	OPTC	Q9UBM4	332 aa		14.18	□□□□□ -0.14
PHGDH-231	ENST00000641939	ZNF180	Q9UJW8	692 aa		14.18	□□□□□ -0.14
PHGDH-231	ENST00000641939	B3GNT3	Q9Y2A9	372 aa		14.18	□□□□□ -0.14
PHGDH-231	ENST00000641939	LRRK2	Q5S007	2527 aa		14.18	□□□□□ -0.14
PHGDH-231	ENST00000641939	ESPL1	Q14674	2120 aa		14.18	□□□□□ -0.14
PHGDH-231	ENST00000641939	SVIL	O95425	2214 aa		14.17	□□□□□ -0.14
PHGDH-231	ENST00000641939	EXOC1L	A0A1B0GW35	172 aa		14.17	□□□□□ -0.14
PHGDH-231	ENST00000641939	LRIT2	A6NDA9	550 aa		14.17	□□□□□ -0.14
PHGDH-231	ENST00000641939	OR2W5	A6NFC9	320 aa		14.17	□□□□□ -0.14
PHGDH-231	ENST00000641939	C4orf51	C9J302	202 aa		14.17	□□□□□ -0.14
PHGDH-231	ENST00000641939	DNAJB6	O75190	326 aa		14.17	□□□□□ -0.14
PHGDH-231	ENST00000641939	CDC123	O75794	336 aa	Predicted RBP	14.17	□□□□□ -0.14
PHGDH-231	ENST00000641939	SERPINA7	P05543	415 aa		14.17	□□□□□ -0.14
PHGDH-231	ENST00000641939	ICAM2	P13598	275 aa		14.17	□□□□□ -0.14
PHGDH-231	ENST00000641939	GFAP	P14136	432 aa		14.17	□□□□□ -0.14
PHGDH-231	ENST00000641939	EPOR	P19235	508 aa		14.17	□□□□□ -0.14
PHGDH-231	ENST00000641939	CD22	P20273	847 aa		14.17	□□□□□ -0.14
PHGDH-231	ENST00000641939	JAK1	P23458	1154 aa		14.17	□□□□□ -0.14
PHGDH-231	ENST00000641939	CNTF	P26441	200 aa		14.17	□□□□□ -0.14
PHGDH-231	ENST00000641939	HPD	P32754	393 aa	Predicted RBP	14.17	□□□□□ -0.14
PHGDH-231	ENST00000641939	CASP2	P42575	452 aa		14.17	□□□□□ -0.14
PHGDH-231	ENST00000641939	AP2B1	P63010	937 aa		14.17	□□□□□ -0.14
PHGDH-231	ENST00000641939	OLR1	P78380	273 aa		14.17	□□□□□ -0.14
PHGDH-231	ENST00000641939	RHAG	Q02094	409 aa		14.17	□□□□□ -0.14
PHGDH-231	ENST00000641939	PFKFB4	Q16877	469 aa		14.17	□□□□□ -0.14
PHGDH-231	ENST00000641939	IGFL2	Q6UWQ7	119 aa		14.17	□□□□□ -0.14
PHGDH-231	ENST00000641939	ISLR2	Q6UXK2	745 aa		14.17	□□□□□ -0.14
PHGDH-231	ENST00000641939	RIPOR1	Q6ZS17	1223 aa		14.17	□□□□□ -0.14
PHGDH-231	ENST00000641939	ANKRD37	Q7Z713	158 aa		14.17	□□□□□ -0.14
PHGDH-231	ENST00000641939		Q8NA96	180 aa		14.17	□□□□□ -0.14
PHGDH-231	ENST00000641939	PLPP5	Q8NEB5	264 aa		14.17	□□□□□ -0.14
PHGDH-231	ENST00000641939	CPT1C	Q8TCG5	803 aa		14.17	□□□□□ -0.14
PHGDH-231	ENST00000641939	DCAKD	Q8WVC6	231 aa		14.17	□□□□□ -0.14
PHGDH-231	ENST00000641939	GAL3ST3	Q96A11	431 aa		14.17	□□□□□ -0.14
PHGDH-231	ENST00000641939	MIB2	Q96AX9	1013 aa		14.17	□□□□□ -0.14
PHGDH-231	ENST00000641939	MS4A6E	Q96DS6	147 aa		14.17	□□□□□ -0.14
PHGDH-231	ENST00000641939	FAR2	Q96K12	515 aa		14.17	□□□□□ -0.14
PHGDH-231	ENST00000641939	RHBG	Q9H310	441 aa		14.17	□□□□□ -0.14
PHGDH-231	ENST00000641939	LUZP4	Q9P127	313 aa		14.17	□□□□□ -0.14
PHGDH-231	ENST00000641939	ZNF490	Q9ULM2	529 aa	Predicted RBP	14.17	□□□□□ -0.14
PHGDH-231	ENST00000641939	PLAA	Q9Y263	795 aa		14.17	□□□□□ -0.14
PHGDH-231	ENST00000641939	MAGEB17	A8MXT2	336 aa		14.16	□□□□□ -0.14
PHGDH-231	ENST00000641939	TRIM49D1	C9J1S8	452 aa		14.16	□□□□□ -0.14
PHGDH-231	ENST00000641939	WFS1	O76024	890 aa		14.16	□□□□□ -0.14
PHGDH-231	ENST00000641939	SEC24D	O94855	1032 aa	Predicted RBP	14.16	□□□□□ -0.14
PHGDH-231	ENST00000641939	RNH1	P13489	461 aa	Known RBP	14.16	□□□□□ -0.14
PHGDH-231	ENST00000641939	HNRNPH1	P31943	449 aa	Known RBP	14.16	□□□□□ -0.14
PHGDH-231	ENST00000641939	ALDH18A1	P54886	795 aa	Known RBP	14.16	□□□□□ -0.14
PHGDH-231	ENST00000641939	BTN3A2	P78410	334 aa		14.16	□□□□□ -0.14
PHGDH-231	ENST00000641939	PCDH1	Q08174	1060 aa		14.16	□□□□□ -0.14
PHGDH-231	ENST00000641939	E2F2	Q14209	437 aa		14.16	□□□□□ -0.14
PHGDH-231	ENST00000641939	NAA30	Q147X3	362 aa	Predicted RBP	14.16	□□□□□ -0.14
PHGDH-231	ENST00000641939	ABRAXAS2	Q15018	415 aa		14.16	□□□□□ -0.14
PHGDH-231	ENST00000641939	SETDB1	Q15047	1291 aa		14.16	□□□□□ -0.14
PHGDH-231	ENST00000641939	NSDHL	Q15738	373 aa		14.16	□□□□□ -0.14
PHGDH-231	ENST00000641939	ADPRM	Q3LIE5	342 aa		14.16	□□□□□ -0.14
PHGDH-231	ENST00000641939	PLEKHN1	Q494U1	663 aa	Predicted RBP	14.16	□□□□□ -0.14
PHGDH-231	ENST00000641939	CRB2	Q5IJ48	1285 aa		14.16	□□□□□ -0.14
PHGDH-231	ENST00000641939		Q6ZS92	163 aa		14.16	□□□□□ -0.14
PHGDH-231	ENST00000641939	VN1R5	Q7Z5H4	357 aa		14.16	□□□□□ -0.14
PHGDH-231	ENST00000641939	PLD6	Q8N2A8	252 aa	Known RBP	14.16	□□□□□ -0.14
PHGDH-231	ENST00000641939	EFCAB3	Q8N7B9	438 aa		14.16	□□□□□ -0.14
PHGDH-231	ENST00000641939	LRRN4CL	Q8ND94	238 aa		14.16	□□□□□ -0.14
PHGDH-231	ENST00000641939	BRIX1	Q8TDN6	353 aa	Known RBP	14.16	□□□□□ -0.14
PHGDH-231	ENST00000641939	PPP4R1	Q8TF05	950 aa		14.16	□□□□□ -0.14
PHGDH-231	ENST00000641939	PSMF1	Q92530	271 aa		14.16	□□□□□ -0.14
PHGDH-231	ENST00000641939	UBE2E3	Q969T4	207 aa		14.16	□□□□□ -0.14
PHGDH-231	ENST00000641939	IMMP1L	Q96LU5	166 aa		14.16	□□□□□ -0.14
PHGDH-231	ENST00000641939	LMF1	Q96S06	567 aa		14.16	□□□□□ -0.14
PHGDH-231	ENST00000641939	WDR77	Q9BQA1	342 aa	Predicted RBP	14.16	□□□□□ -0.14
PHGDH-231	ENST00000641939	REXO4	Q9GZR2	422 aa	Known RBP	14.16	□□□□□ -0.14
PHGDH-231	ENST00000641939	ILKAP	Q9H0C8	392 aa	Predicted RBP	14.16	□□□□□ -0.14
PHGDH-231	ENST00000641939	EPS8L2	Q9H6S3	715 aa		14.16	□□□□□ -0.14
PHGDH-231	ENST00000641939	ZNF358	Q9NW07	568 aa		14.16	□□□□□ -0.14
PHGDH-231	ENST00000641939	PTPN13	Q12923	2485 aa		14.15	□□□□□ -0.14
PHGDH-231	ENST00000641939		A0A088AWK7	358 aa		14.15	□□□□□ -0.14
PHGDH-231	ENST00000641939	IGHV3-20	A0A0C4DH32	117 aa		14.15	□□□□□ -0.14
PHGDH-231	ENST00000641939	PSMD12	O00232	456 aa	Predicted RBP	14.15	□□□□□ -0.14
PHGDH-231	ENST00000641939	RIPK2	O43353	540 aa		14.15	□□□□□ -0.14
PHGDH-231	ENST00000641939	ERI3	O43414	337 aa	Known RBP	14.15	□□□□□ -0.14
PHGDH-231	ENST00000641939	KLK8	O60259	260 aa		14.15	□□□□□ -0.14
PHGDH-231	ENST00000641939	B4GALT2	O60909	372 aa		14.15	□□□□□ -0.14
PHGDH-231	ENST00000641939	TBX6	O95947	436 aa	Predicted RBP	14.15	□□□□□ -0.14
PHGDH-231	ENST00000641939	CELA2A	P08217	269 aa		14.15	□□□□□ -0.14
PHGDH-231	ENST00000641939	SNRPA	P09012	282 aa	Known RBP	14.15	□□□□□ -0.14
PHGDH-231	ENST00000641939	RBP1	P09455	135 aa		14.15	□□□□□ -0.14
PHGDH-231	ENST00000641939	FAM153B	P0C7A2	387 aa		14.15	□□□□□ -0.14
PHGDH-231	ENST00000641939	COL6A2	P12110	1019 aa		14.15	□□□□□ -0.14
PHGDH-231	ENST00000641939	EPB42	P16452	691 aa		14.15	□□□□□ -0.14
PHGDH-231	ENST00000641939	ZNF10	P21506	573 aa	Predicted RBP	14.15	□□□□□ -0.14
PHGDH-231	ENST00000641939	MFAP5	Q13361	173 aa		14.15	□□□□□ -0.14
PHGDH-231	ENST00000641939	INPP5J	Q15735	1006 aa	Predicted RBP	14.15	□□□□□ -0.14
PHGDH-231	ENST00000641939	TSNAXIP1	Q2TAA8	658 aa		14.15	□□□□□ -0.14

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms