RNA–Protein interactions for RNA: ENST00000640657.1

HNRNPU-230, Transcript of heterogeneous nuclear ribonucleoprotein U, human

TSL 5

Gene HNRNPU, Length 4,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPU-230	ENST00000640657	DPCD	Q9BVM2	203 aa	Predicted RBP	4.85	□□□□□ -1.63
HNRNPU-230	ENST00000640657	MMP28	Q9H239	520 aa		4.85	□□□□□ -1.63
HNRNPU-230	ENST00000640657	ZFYVE1	Q9HBF4	777 aa		4.85	□□□□□ -1.63
HNRNPU-230	ENST00000640657	PLAC1	Q9HBJ0	212 aa		4.85	□□□□□ -1.63
HNRNPU-230	ENST00000640657	ZSCAN32	Q9NX65	697 aa		4.85	□□□□□ -1.63
HNRNPU-230	ENST00000640657	VAPA	Q9P0L0	249 aa		4.85	□□□□□ -1.63
HNRNPU-230	ENST00000640657	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	4.85	□□□□□ -1.63
HNRNPU-230	ENST00000640657	RGS17	Q9UGC6	210 aa	Predicted RBP	4.85	□□□□□ -1.63
HNRNPU-230	ENST00000640657	GPN3	Q9UHW5	284 aa	Predicted RBP	4.85	□□□□□ -1.63
HNRNPU-230	ENST00000640657		A0A1W2PQH9	124 aa		4.85	□□□□□ -1.63
HNRNPU-230	ENST00000640657	OR6C75	A6NL08	312 aa		4.85	□□□□□ -1.63
HNRNPU-230	ENST00000640657	TEX46	H3BTG2	121 aa		4.85	□□□□□ -1.63
HNRNPU-230	ENST00000640657	LRRTM2	O43300	516 aa		4.85	□□□□□ -1.63
HNRNPU-230	ENST00000640657	NIPSNAP2	O75323	286 aa		4.85	□□□□□ -1.63
HNRNPU-230	ENST00000640657	ADORA3	P0DMS8	318 aa		4.85	□□□□□ -1.63
HNRNPU-230	ENST00000640657	TYR	P14679	529 aa		4.85	□□□□□ -1.63
HNRNPU-230	ENST00000640657	MMP12	P39900	470 aa		4.85	□□□□□ -1.63
HNRNPU-230	ENST00000640657	RBM34	P42696	430 aa	Known RBP	4.85	□□□□□ -1.63
HNRNPU-230	ENST00000640657	DAP	P51397	102 aa		4.85	□□□□□ -1.63
HNRNPU-230	ENST00000640657	SLC10A7	Q0GE19	358 aa		4.85	□□□□□ -1.63
HNRNPU-230	ENST00000640657	UGT3A2	Q3SY77	523 aa		4.85	□□□□□ -1.63
HNRNPU-230	ENST00000640657	FAM182B	Q5T319	152 aa		4.85	□□□□□ -1.63
HNRNPU-230	ENST00000640657	HFE2	Q6ZVN8	426 aa		4.85	□□□□□ -1.63
HNRNPU-230	ENST00000640657	CCDC190	Q86UF4	302 aa		4.85	□□□□□ -1.63
HNRNPU-230	ENST00000640657	BPHL	Q86WA6	291 aa	Predicted RBP	4.85	□□□□□ -1.63
HNRNPU-230	ENST00000640657	ZNF655	Q8N720	491 aa	Predicted RBP	4.85	□□□□□ -1.63
HNRNPU-230	ENST00000640657	LSMEM1	Q8N8F7	131 aa		4.85	□□□□□ -1.63
HNRNPU-230	ENST00000640657		Q8N9G6	341 aa	Predicted RBP	4.85	□□□□□ -1.63
HNRNPU-230	ENST00000640657	ACVR1C	Q8NER5	493 aa		4.85	□□□□□ -1.63
HNRNPU-230	ENST00000640657	FBXO22	Q8NEZ5	403 aa		4.85	□□□□□ -1.63
HNRNPU-230	ENST00000640657	SNIP1	Q8TAD8	396 aa	Known RBP	4.85	□□□□□ -1.63
HNRNPU-230	ENST00000640657	MARVELD3	Q96A59	401 aa		4.85	□□□□□ -1.63
HNRNPU-230	ENST00000640657	FKBP10	Q96AY3	582 aa		4.85	□□□□□ -1.63
HNRNPU-230	ENST00000640657	ZNF578	Q96N58	590 aa	Predicted RBP	4.85	□□□□□ -1.63
HNRNPU-230	ENST00000640657	CDK15	Q96Q40	435 aa		4.85	□□□□□ -1.63
HNRNPU-230	ENST00000640657	DPYSL5	Q9BPU6	564 aa		4.85	□□□□□ -1.63
HNRNPU-230	ENST00000640657	UQCC2	Q9BRT2	126 aa		4.85	□□□□□ -1.63
HNRNPU-230	ENST00000640657	CCM2	Q9BSQ5	444 aa		4.85	□□□□□ -1.63
HNRNPU-230	ENST00000640657	TTPAL	Q9BTX7	342 aa		4.85	□□□□□ -1.63
HNRNPU-230	ENST00000640657	CDCA4	Q9BXL8	241 aa		4.85	□□□□□ -1.63
HNRNPU-230	ENST00000640657	TBC1D17	Q9HA65	648 aa		4.85	□□□□□ -1.63
HNRNPU-230	ENST00000640657	WDR6	Q9NNW5	1121 aa	Known RBP	4.85	□□□□□ -1.63
HNRNPU-230	ENST00000640657	TMEM138	Q9NPI0	162 aa		4.85	□□□□□ -1.63
HNRNPU-230	ENST00000640657	FARSB	Q9NSD9	589 aa	Known RBP	4.85	□□□□□ -1.63
HNRNPU-230	ENST00000640657	NLK	Q9UBE8	527 aa		4.85	□□□□□ -1.63
HNRNPU-230	ENST00000640657	EXTL2	Q9UBQ6	330 aa		4.85	□□□□□ -1.63
HNRNPU-230	ENST00000640657	SCP2D1	Q9UJQ7	156 aa		4.85	□□□□□ -1.63
HNRNPU-230	ENST00000640657	PTGDR2	Q9Y5Y4	395 aa		4.85	□□□□□ -1.63
HNRNPU-230	ENST00000640657	CLCA3P	Q9Y6N3	262 aa		4.85	□□□□□ -1.63
HNRNPU-230	ENST00000640657	NHS	Q6T4R5	1651 aa		4.84	□□□□□ -1.63
HNRNPU-230	ENST00000640657	CASTOR2	A6NHX0	329 aa		4.84	□□□□□ -1.63
HNRNPU-230	ENST00000640657	ARVCF	O00192	962 aa		4.84	□□□□□ -1.63
HNRNPU-230	ENST00000640657	CCL22	O00626	93 aa		4.84	□□□□□ -1.63
HNRNPU-230	ENST00000640657	CTDSP2	O14595	271 aa		4.84	□□□□□ -1.63
HNRNPU-230	ENST00000640657	PCDH17	O14917	1159 aa		4.84	□□□□□ -1.63
HNRNPU-230	ENST00000640657	CACNG3	O60359	315 aa		4.84	□□□□□ -1.63
HNRNPU-230	ENST00000640657	ALPP	P05187	535 aa		4.84	□□□□□ -1.63
HNRNPU-230	ENST00000640657	IL3	P08700	152 aa		4.84	□□□□□ -1.63
HNRNPU-230	ENST00000640657	SBK3	P0C264	359 aa		4.84	□□□□□ -1.63
HNRNPU-230	ENST00000640657	ACPP	P15309	386 aa		4.84	□□□□□ -1.63
HNRNPU-230	ENST00000640657	EPOR	P19235	508 aa		4.84	□□□□□ -1.63
HNRNPU-230	ENST00000640657	DSTN	P60981	165 aa		4.84	□□□□□ -1.63
HNRNPU-230	ENST00000640657	SELENOW	P63302	87 aa		4.84	□□□□□ -1.63
HNRNPU-230	ENST00000640657	C2orf80	Q0P641	193 aa		4.84	□□□□□ -1.63
HNRNPU-230	ENST00000640657	NTRK2	Q16620	822 aa		4.84	□□□□□ -1.63
HNRNPU-230	ENST00000640657	EXOC3L2	Q2M3D2	409 aa		4.84	□□□□□ -1.63
HNRNPU-230	ENST00000640657	NOXRED1	Q6NXP6	359 aa		4.84	□□□□□ -1.63
HNRNPU-230	ENST00000640657	DLEU7	Q6UYE1	221 aa		4.84	□□□□□ -1.63
HNRNPU-230	ENST00000640657	FAM20C	Q8IXL6	584 aa		4.84	□□□□□ -1.63
HNRNPU-230	ENST00000640657	NPW	Q8N729	165 aa		4.84	□□□□□ -1.63
HNRNPU-230	ENST00000640657	GNPDA2	Q8TDQ7	276 aa		4.84	□□□□□ -1.63
HNRNPU-230	ENST00000640657	ADAMTS19	Q8TE59	1207 aa		4.84	□□□□□ -1.63
HNRNPU-230	ENST00000640657	WDFY2	Q96P53	400 aa		4.84	□□□□□ -1.63
HNRNPU-230	ENST00000640657	BBS4	Q96RK4	519 aa		4.84	□□□□□ -1.63
HNRNPU-230	ENST00000640657	IL4I1	Q96RQ9	567 aa		4.84	□□□□□ -1.63
HNRNPU-230	ENST00000640657	SMO	Q99835	787 aa		4.84	□□□□□ -1.63
HNRNPU-230	ENST00000640657	MGME1	Q9BQP7	344 aa		4.84	□□□□□ -1.63
HNRNPU-230	ENST00000640657	NTMT1	Q9BV86	223 aa		4.84	□□□□□ -1.63
HNRNPU-230	ENST00000640657	GABARAPL3	Q9BY60	117 aa		4.84	□□□□□ -1.63
HNRNPU-230	ENST00000640657	ABCG5	Q9H222	651 aa		4.84	□□□□□ -1.63
HNRNPU-230	ENST00000640657	MINDY3	Q9H8M7	445 aa		4.84	□□□□□ -1.63
HNRNPU-230	ENST00000640657	QTRT2	Q9H974	415 aa	Known RBP	4.84	□□□□□ -1.63
HNRNPU-230	ENST00000640657	RDH14	Q9HBH5	336 aa		4.84	□□□□□ -1.63
HNRNPU-230	ENST00000640657	BPIFA1	Q9NP55	256 aa		4.84	□□□□□ -1.63
HNRNPU-230	ENST00000640657	TRIM36	Q9NQ86	728 aa		4.84	□□□□□ -1.63
HNRNPU-230	ENST00000640657	TMEM39A	Q9NV64	488 aa		4.84	□□□□□ -1.63
HNRNPU-230	ENST00000640657	IL20	Q9NYY1	176 aa		4.84	□□□□□ -1.63
HNRNPU-230	ENST00000640657	HS3ST4	Q9Y661	456 aa		4.84	□□□□□ -1.63
HNRNPU-230	ENST00000640657	ENPP4	Q9Y6X5	453 aa		4.84	□□□□□ -1.63
HNRNPU-230	ENST00000640657	CEP350	Q5VT06	3117 aa		4.84	□□□□□ -1.63
HNRNPU-230	ENST00000640657	MYBPHL	A2RUH7	354 aa		4.84	□□□□□ -1.63
HNRNPU-230	ENST00000640657	UBFD1	O14562	309 aa	Known RBP	4.84	□□□□□ -1.63
HNRNPU-230	ENST00000640657	PEX14	O75381	377 aa		4.84	□□□□□ -1.63
HNRNPU-230	ENST00000640657	SLC34A2	O95436	690 aa		4.84	□□□□□ -1.63
HNRNPU-230	ENST00000640657	ALDH1A1	P00352	501 aa		4.84	□□□□□ -1.63
HNRNPU-230	ENST00000640657	MPC1L	P0DKB6	136 aa		4.84	□□□□□ -1.63
HNRNPU-230	ENST00000640657	SMIM10L2A	P0DMW4	78 aa		4.84	□□□□□ -1.63
HNRNPU-230	ENST00000640657	SMIM10L2B	P0DMW5	78 aa		4.84	□□□□□ -1.63
HNRNPU-230	ENST00000640657	PFKL	P17858	780 aa		4.84	□□□□□ -1.63
HNRNPU-230	ENST00000640657	EDNRB	P24530	442 aa		4.84	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms