RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 KPNA3O00505 521 aaPredicted RBP14.01□□□□□ -0.17
SCARB2-221ENST00000640341 RPLP0P05388 317 aaKnown RBP14.01□□□□□ -0.17
SCARB2-221ENST00000640341 ALOX5P09917 674 aa14.01□□□□□ -0.17
SCARB2-221ENST00000640341 GSTT2P0CG29 244 aa14.01□□□□□ -0.17
SCARB2-221ENST00000640341 GSTT2BP0CG30 244 aa14.01□□□□□ -0.17
SCARB2-221ENST00000640341 ADORA3P0DMS8 318 aa14.01□□□□□ -0.17
SCARB2-221ENST00000640341 IMPA1P29218 277 aa14.01□□□□□ -0.17
SCARB2-221ENST00000640341 GRK3P35626 688 aa14.01□□□□□ -0.17
SCARB2-221ENST00000640341 NR4A2P43354 598 aa14.01□□□□□ -0.17
SCARB2-221ENST00000640341 GRIN2CQ14957 1233 aa14.01□□□□□ -0.17
SCARB2-221ENST00000640341 KCNJ8Q15842 424 aa14.01□□□□□ -0.17
SCARB2-221ENST00000640341 IFI44LQ53G44 452 aa14.01□□□□□ -0.17
SCARB2-221ENST00000640341 TMEM53Q6P2H8 277 aa14.01□□□□□ -0.17
SCARB2-221ENST00000640341 FAHD1Q6P587 224 aa14.01□□□□□ -0.17
SCARB2-221ENST00000640341 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.01□□□□□ -0.17
SCARB2-221ENST00000640341 LYSMD2Q8IV50 215 aa14.01□□□□□ -0.17
SCARB2-221ENST00000640341 DNAJC22Q8N4W6 341 aa14.01□□□□□ -0.17
SCARB2-221ENST00000640341 RASGEF1AQ8N9B8 481 aa14.01□□□□□ -0.17
SCARB2-221ENST00000640341 B3GNT7Q8NFL0 401 aa14.01□□□□□ -0.17
SCARB2-221ENST00000640341 PPCDCQ96CD2 204 aa14.01□□□□□ -0.17
SCARB2-221ENST00000640341 IL17FQ96PD4 163 aa14.01□□□□□ -0.17
SCARB2-221ENST00000640341 BTBD2Q9BX70 525 aa14.01□□□□□ -0.17
SCARB2-221ENST00000640341 SLC46A2Q9BY10 475 aa14.01□□□□□ -0.17
SCARB2-221ENST00000640341 NUAK2Q9H093 628 aa14.01□□□□□ -0.17
SCARB2-221ENST00000640341 MIEF1Q9NQG6 463 aa14.01□□□□□ -0.17
SCARB2-221ENST00000640341 CTPS2Q9NRF8 586 aa14.01□□□□□ -0.17
SCARB2-221ENST00000640341 GPATCH2Q9NW75 528 aa14.01□□□□□ -0.17
SCARB2-221ENST00000640341 QPCTLQ9NXS2 382 aa14.01□□□□□ -0.17
SCARB2-221ENST00000640341 PSORS1C1Q9UIG5 152 aa14.01□□□□□ -0.17
SCARB2-221ENST00000640341 HSPE1-MOB4S4R3N1 261 aa14.01□□□□□ -0.17
SCARB2-221ENST00000640341 RTCAO00442 366 aaKnown RBP14.01□□□□□ -0.17
SCARB2-221ENST00000640341 IGFBP1P08833 259 aaPredicted RBP14.01□□□□□ -0.17
SCARB2-221ENST00000640341 GGT2P36268 569 aa14.01□□□□□ -0.17
SCARB2-221ENST00000640341 EIF2DP41214 584 aaKnown RBP14.01□□□□□ -0.17
SCARB2-221ENST00000640341 PLEKHS1Q5SXH7 462 aa14.01□□□□□ -0.17
SCARB2-221ENST00000640341 PTCHD4Q6ZW05 846 aa14.01□□□□□ -0.17
SCARB2-221ENST00000640341 COMMD6Q7Z4G1 85 aa14.01□□□□□ -0.17
SCARB2-221ENST00000640341 BCDIN3DQ7Z5W3 292 aaKnown RBP14.01□□□□□ -0.17
SCARB2-221ENST00000640341 TSEN54Q7Z6J9 526 aaKnown RBP14.01□□□□□ -0.17
SCARB2-221ENST00000640341 DDX53Q86TM3 631 aaKnown RBP14.01□□□□□ -0.17
SCARB2-221ENST00000640341 EMILIN2Q9BXX0 1053 aa14.01□□□□□ -0.17
SCARB2-221ENST00000640341 OSGIN1Q9UJX0 560 aa14.01□□□□□ -0.17
SCARB2-221ENST00000640341 CFAP20Q9Y6A4 193 aaKnown RBP14.01□□□□□ -0.17
SCARB2-221ENST00000640341 TRAV19A0A0A6YYK7 116 aa14□□□□□ -0.17
SCARB2-221ENST00000640341 PRAMEF33A0A0G2JMD5 474 aa14□□□□□ -0.17
SCARB2-221ENST00000640341 H3BM21 787 aa14□□□□□ -0.17
SCARB2-221ENST00000640341 CTDSP2O14595 271 aa14□□□□□ -0.17
SCARB2-221ENST00000640341 PRAMEF10O60809 474 aa14□□□□□ -0.17
SCARB2-221ENST00000640341 UPK1BO75841 260 aa14□□□□□ -0.17
SCARB2-221ENST00000640341 GADD45GO95257 159 aa14□□□□□ -0.17
SCARB2-221ENST00000640341 PTGER1P34995 402 aa14□□□□□ -0.17
SCARB2-221ENST00000640341 POLR2LP62875 67 aaKnown RBP14□□□□□ -0.17
SCARB2-221ENST00000640341 MXD1Q05195 221 aa14□□□□□ -0.17
SCARB2-221ENST00000640341 GCNT6Q5T4J0 391 aa14□□□□□ -0.17
SCARB2-221ENST00000640341 METTL2BQ6P1Q9 378 aaKnown RBP14□□□□□ -0.17
SCARB2-221ENST00000640341 RAB8BQ92930 207 aa14□□□□□ -0.17
SCARB2-221ENST00000640341 AP2M1Q96CW1 435 aa14□□□□□ -0.17
SCARB2-221ENST00000640341 SIAEQ9HAT2 523 aa14□□□□□ -0.17
SCARB2-221ENST00000640341 ERVW-1Q9UQF0 538 aa14□□□□□ -0.17
SCARB2-221ENST00000640341 A0A0G2JN53 185 aa14□□□□□ -0.17
SCARB2-221ENST00000640341 HTR3EA5X5Y0 456 aa14□□□□□ -0.17
SCARB2-221ENST00000640341 PLK4O00444 970 aa14□□□□□ -0.17
SCARB2-221ENST00000640341 SSX4O60224 188 aa14□□□□□ -0.17
SCARB2-221ENST00000640341 TBPL1P62380 186 aa14□□□□□ -0.17
SCARB2-221ENST00000640341 CDK6Q00534 326 aa14□□□□□ -0.17
SCARB2-221ENST00000640341 VEZF1Q14119 521 aa14□□□□□ -0.17
SCARB2-221ENST00000640341 C10orf62Q5T681 223 aaPredicted RBP14□□□□□ -0.17
SCARB2-221ENST00000640341 DEPDC1Q5TB30 811 aa14□□□□□ -0.17
SCARB2-221ENST00000640341 DESI1Q6ICB0 168 aa14□□□□□ -0.17
SCARB2-221ENST00000640341 MED27Q6P2C8 311 aa14□□□□□ -0.17
SCARB2-221ENST00000640341 C11orf96Q7Z7L8 435 aa14□□□□□ -0.17
SCARB2-221ENST00000640341 PARP16Q8N5Y8 322 aa14□□□□□ -0.17
SCARB2-221ENST00000640341 OR2A12Q8NGT7 310 aa14□□□□□ -0.17
SCARB2-221ENST00000640341 SPATA6Q9NWH7 488 aaPredicted RBP14□□□□□ -0.17
SCARB2-221ENST00000640341 EHD3Q9NZN3 535 aa14□□□□□ -0.17
SCARB2-221ENST00000640341 PCDHGA4Q9Y5G9 962 aa14□□□□□ -0.17
SCARB2-221ENST00000640341 PRAMEF25A6NGN4 478 aa14□□□□□ -0.17
SCARB2-221ENST00000640341 AGAP5A6NIR3 686 aa14□□□□□ -0.17
SCARB2-221ENST00000640341 ACVR2AP27037 513 aa14□□□□□ -0.17
SCARB2-221ENST00000640341 TIA1P31483 386 aaKnown RBP eCLIP14□□□□□ -0.17
SCARB2-221ENST00000640341 HOXD12P35452 270 aa14□□□□□ -0.17
SCARB2-221ENST00000640341 TM4SF4P48230 202 aa14□□□□□ -0.17
SCARB2-221ENST00000640341 TMEM115Q12893 351 aaPredicted RBP14□□□□□ -0.17
SCARB2-221ENST00000640341 PTGES3Q15185 160 aaKnown RBP14□□□□□ -0.17
SCARB2-221ENST00000640341 ANXA8L1Q5VT79 327 aa14□□□□□ -0.17
SCARB2-221ENST00000640341 CNPPD1Q9BV87 410 aa14□□□□□ -0.17
SCARB2-221ENST00000640341 ZDHHC4Q9NPG8 344 aa14□□□□□ -0.17
SCARB2-221ENST00000640341 CCDC88CQ9P219 2028 aa14□□□□□ -0.17
SCARB2-221ENST00000640341 ANKDD1BA6NHY2 528 aa13.99□□□□□ -0.17
SCARB2-221ENST00000640341 GRM6O15303 877 aa13.99□□□□□ -0.17
SCARB2-221ENST00000640341 TGM5O43548 720 aa13.99□□□□□ -0.17
SCARB2-221ENST00000640341 CDK1P06493 297 aa13.99□□□□□ -0.17
SCARB2-221ENST00000640341 ELFN1P0C7U0 828 aa13.99□□□□□ -0.17
SCARB2-221ENST00000640341 PABPC1P11940 636 aaKnown RBP13.99□□□□□ -0.17
SCARB2-221ENST00000640341 ASMTP46597 345 aa13.99□□□□□ -0.17
SCARB2-221ENST00000640341 SELENBP1Q13228 472 aa13.99□□□□□ -0.17
SCARB2-221ENST00000640341 SPANXN2Q5MJ10 180 aa13.99□□□□□ -0.17
SCARB2-221ENST00000640341 AGAP7PQ5VUJ5 663 aa13.99□□□□□ -0.17
SCARB2-221ENST00000640341 USP43Q70EL4 1123 aa13.99□□□□□ -0.17
SCARB2-221ENST00000640341 ARMCX6Q7L4S7 300 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms