RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 OXTRP30559 389 aa11.07□□□□□ -0.64
CLN6-217ENST00000636964 NR4A2P43354 598 aa11.07□□□□□ -0.64
CLN6-217ENST00000636964 TNFRSF4P43489 277 aa11.07□□□□□ -0.64
CLN6-217ENST00000636964 TPTEP56180 551 aa11.07□□□□□ -0.64
CLN6-217ENST00000636964 TBPL1P62380 186 aa11.07□□□□□ -0.64
CLN6-217ENST00000636964 MEF2AQ02078 507 aaPredicted RBP11.07□□□□□ -0.64
CLN6-217ENST00000636964 PLCL1Q15111 1095 aa11.07□□□□□ -0.64
CLN6-217ENST00000636964 TBC1D3GQ6DHY5 549 aa11.07□□□□□ -0.64
CLN6-217ENST00000636964 TBC1D3CQ6IPX1 549 aa11.07□□□□□ -0.64
CLN6-217ENST00000636964 TMPRSS11BQ86T26 416 aa11.07□□□□□ -0.64
CLN6-217ENST00000636964 TBC1D3Q8IZP1 549 aaPredicted RBP11.07□□□□□ -0.64
CLN6-217ENST00000636964 TMEM125Q96AQ2 219 aa11.07□□□□□ -0.64
CLN6-217ENST00000636964 ACAT2Q9BWD1 397 aa11.07□□□□□ -0.64
CLN6-217ENST00000636964 ZDHHC5Q9C0B5 715 aa11.07□□□□□ -0.64
CLN6-217ENST00000636964 LIMD1Q9UGP4 676 aa11.07□□□□□ -0.64
CLN6-217ENST00000636964 GPR34Q9UPC5 381 aa11.07□□□□□ -0.64
CLN6-217ENST00000636964 PCDHA9Q9Y5H5 950 aa11.07□□□□□ -0.64
CLN6-217ENST00000636964 SLC31A1O15431 190 aa11.06□□□□□ -0.64
CLN6-217ENST00000636964 BCL10O95999 233 aa11.06□□□□□ -0.64
CLN6-217ENST00000636964 NCK1P16333 377 aa11.06□□□□□ -0.64
CLN6-217ENST00000636964 MTPNP58546 118 aa11.06□□□□□ -0.64
CLN6-217ENST00000636964 SGCGQ13326 291 aa11.06□□□□□ -0.64
CLN6-217ENST00000636964 SELPLGQ14242 412 aa11.06□□□□□ -0.64
CLN6-217ENST00000636964 CARTPTQ16568 116 aa11.06□□□□□ -0.64
CLN6-217ENST00000636964 USP39Q53GS9 565 aaKnown RBP11.06□□□□□ -0.64
CLN6-217ENST00000636964 CLVS2Q5SYC1 327 aa11.06□□□□□ -0.64
CLN6-217ENST00000636964 SDE2Q6IQ49 451 aa11.06□□□□□ -0.64
CLN6-217ENST00000636964 SLC16A12Q6ZSM3 486 aa11.06□□□□□ -0.64
CLN6-217ENST00000636964 DHFR2Q86XF0 187 aa11.06□□□□□ -0.64
CLN6-217ENST00000636964 SPPL2CQ8IUH8 684 aa11.06□□□□□ -0.64
CLN6-217ENST00000636964 CLIP4Q8N3C7 705 aa11.06□□□□□ -0.64
CLN6-217ENST00000636964 OR2T3Q8NH03 318 aa11.06□□□□□ -0.64
CLN6-217ENST00000636964 CYGBQ8WWM9 190 aa11.06□□□□□ -0.64
CLN6-217ENST00000636964 ZNF514Q96K75 400 aaPredicted RBP11.06□□□□□ -0.64
CLN6-217ENST00000636964 ZNF347Q96SE7 839 aa11.06□□□□□ -0.64
CLN6-217ENST00000636964 ALOXE3Q9BYJ1 711 aa11.06□□□□□ -0.64
CLN6-217ENST00000636964 SGK2Q9HBY8 427 aa11.06□□□□□ -0.64
CLN6-217ENST00000636964 ANKMY1Q9P2S6 941 aa11.06□□□□□ -0.64
CLN6-217ENST00000636964 MTCH2Q9Y6C9 303 aa11.06□□□□□ -0.64
CLN6-217ENST00000636964 PIAS3Q9Y6X2 628 aa11.06□□□□□ -0.64
CLN6-217ENST00000636964 MYO10Q9HD67 2058 aa11.06□□□□□ -0.64
CLN6-217ENST00000636964 A0A1W2PQU0 124 aa11.06□□□□□ -0.64
CLN6-217ENST00000636964 DNTTP04053 509 aa11.06□□□□□ -0.64
CLN6-217ENST00000636964 MTHFD1P11586 935 aaKnown RBP11.06□□□□□ -0.64
CLN6-217ENST00000636964 MRPL19P49406 292 aaKnown RBP11.06□□□□□ -0.64
CLN6-217ENST00000636964 RUNX1T1Q06455 604 aa11.06□□□□□ -0.64
CLN6-217ENST00000636964 MAD2L1Q13257 205 aaPredicted RBP11.06□□□□□ -0.64
CLN6-217ENST00000636964 GGTA1PQ4G0N0 100 aa11.06□□□□□ -0.64
CLN6-217ENST00000636964 INTS11Q5TA45 600 aaKnown RBP11.06□□□□□ -0.64
CLN6-217ENST00000636964 ADAMTSL4Q6UY14 1074 aa11.06□□□□□ -0.64
CLN6-217ENST00000636964 SMRP1Q8NCR6 262 aa11.06□□□□□ -0.64
CLN6-217ENST00000636964 OR56A3Q8NH54 315 aa11.06□□□□□ -0.64
CLN6-217ENST00000636964 ZFP90Q8TF47 636 aa11.06□□□□□ -0.64
CLN6-217ENST00000636964 TSPEARQ8WU66 669 aa11.06□□□□□ -0.64
CLN6-217ENST00000636964 INTS12Q96CB8 462 aaKnown RBP11.06□□□□□ -0.64
CLN6-217ENST00000636964 ZBTB18Q99592 522 aa11.06□□□□□ -0.64
CLN6-217ENST00000636964 MARCH7Q9H992 704 aa11.06□□□□□ -0.64
CLN6-217ENST00000636964 AGPAT4Q9NRZ5 378 aa11.06□□□□□ -0.64
CLN6-217ENST00000636964 ARMC1Q9NVT9 282 aa11.06□□□□□ -0.64
CLN6-217ENST00000636964 TMEM9Q9P0T7 183 aa11.06□□□□□ -0.64
CLN6-217ENST00000636964 ABCD2Q9UBJ2 740 aa11.06□□□□□ -0.64
CLN6-217ENST00000636964 OAZ3Q9UMX2 235 aa11.06□□□□□ -0.64
CLN6-217ENST00000636964 CKAP5Q14008 2032 aa11.06□□□□□ -0.64
CLN6-217ENST00000636964 A0A1W2PQF6 199 aa11.06□□□□□ -0.64
CLN6-217ENST00000636964 TOR1BO14657 336 aa11.06□□□□□ -0.64
CLN6-217ENST00000636964 TPST1O60507 370 aa11.06□□□□□ -0.64
CLN6-217ENST00000636964 ZNF3P17036 446 aa11.06□□□□□ -0.64
CLN6-217ENST00000636964 ACADLP28330 430 aa11.06□□□□□ -0.64
CLN6-217ENST00000636964 GSK3BP49841 420 aa11.06□□□□□ -0.64
CLN6-217ENST00000636964 ARHGDIBP52566 201 aa11.06□□□□□ -0.64
CLN6-217ENST00000636964 TMBIM6P55061 237 aa11.06□□□□□ -0.64
CLN6-217ENST00000636964 LIPEQ05469 1076 aa11.06□□□□□ -0.64
CLN6-217ENST00000636964 ATP6AP1Q15904 470 aa11.06□□□□□ -0.64
CLN6-217ENST00000636964 DLEU7Q6UYE1 221 aa11.06□□□□□ -0.64
CLN6-217ENST00000636964 LRRTM4Q86VH4 590 aa11.06□□□□□ -0.64
CLN6-217ENST00000636964 ANKRD46Q86W74 232 aa11.06□□□□□ -0.64
CLN6-217ENST00000636964 OR9A1PQ8NGU1 263 aa11.06□□□□□ -0.64
CLN6-217ENST00000636964 TP53INP1Q96A56 240 aa11.06□□□□□ -0.64
CLN6-217ENST00000636964 OR52A5Q9H2C5 316 aa11.06□□□□□ -0.64
CLN6-217ENST00000636964 OSGEPL1Q9H4B0 414 aa11.06□□□□□ -0.64
CLN6-217ENST00000636964 WDR26Q9H7D7 661 aa11.06□□□□□ -0.64
CLN6-217ENST00000636964 IFT80Q9P2H3 777 aaPredicted RBP11.06□□□□□ -0.64
CLN6-217ENST00000636964 PLEKHM1Q9Y4G2 1056 aa11.06□□□□□ -0.64
CLN6-217ENST00000636964 OR5K4A6NMS3 321 aa11.05□□□□□ -0.64
CLN6-217ENST00000636964 MAGEB17A8MXT2 336 aa11.05□□□□□ -0.64
CLN6-217ENST00000636964 CLOCKO15516 846 aa11.05□□□□□ -0.64
CLN6-217ENST00000636964 EIF2S1P05198 315 aaKnown RBP11.05□□□□□ -0.64
CLN6-217ENST00000636964 ASGR2P07307 311 aa11.05□□□□□ -0.64
CLN6-217ENST00000636964 ACP5P13686 325 aa11.05□□□□□ -0.64
CLN6-217ENST00000636964 NPPBP16860 134 aa11.05□□□□□ -0.64
CLN6-217ENST00000636964 COQ5Q5HYK3 327 aa11.05□□□□□ -0.64
CLN6-217ENST00000636964 LIPJQ5W064 366 aa11.05□□□□□ -0.64
CLN6-217ENST00000636964 USP51Q70EK9 711 aa11.05□□□□□ -0.64
CLN6-217ENST00000636964 TFGQ92734 400 aaPredicted RBP11.05□□□□□ -0.64
CLN6-217ENST00000636964 HDAC2Q92769 488 aaKnown RBP11.05□□□□□ -0.64
CLN6-217ENST00000636964 METTL2AQ96IZ6 378 aaKnown RBP11.05□□□□□ -0.64
CLN6-217ENST00000636964 LINC00615Q96LM1 132 aaPredicted RBP11.05□□□□□ -0.64
CLN6-217ENST00000636964 HOXD1Q9GZZ0 328 aa11.05□□□□□ -0.64
CLN6-217ENST00000636964 ALG2Q9H553 416 aa11.05□□□□□ -0.64
CLN6-217ENST00000636964 GPN2Q9H9Y4 310 aaPredicted RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms