RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 TTC9Q92623 222 aa14.23□□□□□ -0.13
CACNA1A-220ENST00000635988 FAM129BQ96TA1 746 aa14.23□□□□□ -0.13
CACNA1A-220ENST00000635988 COPS8Q99627 209 aa14.23□□□□□ -0.13
CACNA1A-220ENST00000635988 RANGRFQ9HD47 186 aaPredicted RBP14.23□□□□□ -0.13
CACNA1A-220ENST00000635988 DIABLOQ9NR28 239 aa14.23□□□□□ -0.13
CACNA1A-220ENST00000635988 SSR3Q9UNL2 185 aa14.23□□□□□ -0.13
CACNA1A-220ENST00000635988 PLXNA4Q9HCM2 1894 aa14.23□□□□□ -0.13
CACNA1A-220ENST00000635988 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 SLC16A5O15375 505 aa14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 TRIM3O75382 744 aaPredicted RBP14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 LGI1O95970 557 aa14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 HSD3B1P14060 373 aa14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 CBLP22681 906 aa14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 HSD3B2P26439 372 aa14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 HLA-DMAP28067 261 aa14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 CRISP1P54107 249 aa14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 AP1S2P56377 157 aa14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 GPR17Q13304 367 aa14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 SP140Q13342 867 aa14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 SPHARQ15513 63 aa14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 ADGRF1Q5T601 910 aa14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 TIGD3Q6B0B8 471 aa14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 CXCL17Q6UXB2 119 aa14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 TCTE3Q8IZS6 198 aa14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 OR9Q2Q8NGE9 314 aa14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 KLHL6Q8WZ60 621 aa14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 KIAA1143Q96AT1 154 aaPredicted RBP14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 TTLL2Q9BWV7 592 aa14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 TIGARQ9NQ88 270 aa14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 SNTG1Q9NSN8 517 aa14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 ZDHHC3Q9NYG2 299 aa14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 FTSJ1Q9UET6 329 aa14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 NUFIP1Q9UHK0 495 aaKnown RBP14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 SLC22A14Q9Y267 594 aa14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 TMA7Q9Y2S6 64 aaKnown RBP14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 HYKKA2RU49 373 aa14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 GABRR3A8MPY1 467 aa14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 AGAP14A8MT82 685 aa14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 DUSP11O75319 330 aaKnown RBP14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 EOMESO95936 686 aa14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 MPC1LP0DKB6 136 aa14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 AKR1A1P14550 325 aa14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 AZGP1P25311 298 aaKnown RBP14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 LIMS1P48059 325 aa14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 SGSHP51688 502 aa14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 P2RX3P56373 397 aa14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 IRF8Q02556 426 aa14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 NCF4Q15080 339 aa14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 CCL14Q16627 93 aa14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 ZXDCQ2QGD7 858 aaPredicted RBP14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 GLYR1Q49A26 553 aaPredicted RBP14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 ZMAT1Q5H9K5 638 aa14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 SLC35F1Q5T1Q4 408 aa14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 PDZK1Q5T2W1 519 aa14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 GCNT6Q5T4J0 391 aa14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 ATXN7L2Q5T6C5 722 aaPredicted RBP14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 FRMPD2BQ6IN97 320 aa14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 FAM131AQ6UXB0 335 aa14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 C16orf59Q7L2K0 433 aa14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 FBXO22Q8NEZ5 403 aa14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 ASB11Q8WXH4 323 aa14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 FAM193BQ96PV7 902 aaPredicted RBP14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 VPS35Q96QK1 796 aa14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 IRF2BPLQ9H1B7 796 aa14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 MMP28Q9H239 520 aa14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 RNF121Q9H920 327 aa14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 SPATA6Q9NWH7 488 aaPredicted RBP14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 KLHL21Q9UJP4 597 aa14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 LSM2Q9Y333 95 aaKnown RBP14.22□□□□□ -0.13
CACNA1A-220ENST00000635988 MYADML2A6NDP7 307 aa14.21□□□□□ -0.13
CACNA1A-220ENST00000635988 SLC38A8A6NNN8 435 aa14.21□□□□□ -0.13
CACNA1A-220ENST00000635988 FADS2P1A8MWK0 482 aa14.21□□□□□ -0.13
CACNA1A-220ENST00000635988 M0R129 80 aa14.21□□□□□ -0.13
CACNA1A-220ENST00000635988 RNASET2O00584 256 aaKnown RBP14.21□□□□□ -0.13
CACNA1A-220ENST00000635988 PCDH7O60245 1069 aa14.21□□□□□ -0.13
CACNA1A-220ENST00000635988 PDE9AO76083 593 aa14.21□□□□□ -0.13
CACNA1A-220ENST00000635988 GADD45GO95257 159 aa14.21□□□□□ -0.13
CACNA1A-220ENST00000635988 CLDN7O95471 211 aa14.21□□□□□ -0.13
CACNA1A-220ENST00000635988 CORO1AP31146 461 aaKnown RBP14.21□□□□□ -0.13
CACNA1A-220ENST00000635988 IL12RB1P42701 662 aa14.21□□□□□ -0.13
CACNA1A-220ENST00000635988 CRATP43155 626 aa14.21□□□□□ -0.13
CACNA1A-220ENST00000635988 CRYBB2P43320 205 aa14.21□□□□□ -0.13
CACNA1A-220ENST00000635988 SNRPGP62308 76 aaKnown RBP14.21□□□□□ -0.13
CACNA1A-220ENST00000635988 DAB2P98082 770 aa14.21□□□□□ -0.13
CACNA1A-220ENST00000635988 LARS2Q15031 903 aaKnown RBP14.21□□□□□ -0.13
CACNA1A-220ENST00000635988 PLCZ1Q86YW0 608 aa14.21□□□□□ -0.13
CACNA1A-220ENST00000635988 ZFAND1Q8TCF1 268 aa14.21□□□□□ -0.13
CACNA1A-220ENST00000635988 BTN2A2Q8WVV5 523 aa14.21□□□□□ -0.13
CACNA1A-220ENST00000635988 GTPBP3Q969Y2 492 aaKnown RBP14.21□□□□□ -0.13
CACNA1A-220ENST00000635988 COQ8BQ96D53 544 aa14.21□□□□□ -0.13
CACNA1A-220ENST00000635988 TMEM80Q96HE8 168 aa14.21□□□□□ -0.13
CACNA1A-220ENST00000635988 TCF25Q9BQ70 676 aa14.21□□□□□ -0.13
CACNA1A-220ENST00000635988 MND1Q9BWT6 205 aa14.21□□□□□ -0.13
CACNA1A-220ENST00000635988 SLC25A19Q9HC21 320 aa14.21□□□□□ -0.13
CACNA1A-220ENST00000635988 FZD3Q9NPG1 666 aa14.21□□□□□ -0.13
CACNA1A-220ENST00000635988 ACER3Q9NUN7 267 aa14.21□□□□□ -0.13
CACNA1A-220ENST00000635988 TRPM7Q96QT4 1865 aa14.21□□□□□ -0.13
CACNA1A-220ENST00000635988 B4DXG7 233 aa14.21□□□□□ -0.13
CACNA1A-220ENST00000635988 H3BM21 787 aa14.21□□□□□ -0.13
CACNA1A-220ENST00000635988 PRAMEF4O60810 478 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms