RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 DHRS7Q9Y394 339 aa18.78■□□□□ 0.6
TARDBP-228ENST00000629725 TRBV11-1A0A0K0K1C0 115 aa18.77■□□□□ 0.6
TARDBP-228ENST00000629725 TCRBV16S1A1N1A0A5B0 115 aa18.77■□□□□ 0.6
TARDBP-228ENST00000629725 CTAGE9A4FU28 777 aa18.77■□□□□ 0.6
TARDBP-228ENST00000629725 A8MUA0 341 aa18.77■□□□□ 0.6
TARDBP-228ENST00000629725 TUBB4AP04350 444 aa18.77■□□□□ 0.6
TARDBP-228ENST00000629725 CCND1P24385 295 aa18.77■□□□□ 0.6
TARDBP-228ENST00000629725 DNASE1P24855 282 aa18.77■□□□□ 0.6
TARDBP-228ENST00000629725 ACVR2AP27037 513 aa18.77■□□□□ 0.6
TARDBP-228ENST00000629725 ZFP36L2P47974 494 aaKnown RBP18.77■□□□□ 0.6
TARDBP-228ENST00000629725 PWP1Q13610 501 aa18.77■□□□□ 0.6
TARDBP-228ENST00000629725 C4orf22Q6V702 233 aa18.77■□□□□ 0.6
TARDBP-228ENST00000629725 RAD9BQ6WBX8 426 aa18.77■□□□□ 0.6
TARDBP-228ENST00000629725 PIWIL4Q7Z3Z4 852 aaKnown RBP18.77■□□□□ 0.6
TARDBP-228ENST00000629725 ZZZ3Q8IYH5 903 aa18.77■□□□□ 0.6
TARDBP-228ENST00000629725 APCDD1LQ8NCL9 501 aa18.77■□□□□ 0.6
TARDBP-228ENST00000629725 OR5M9Q8NGP3 310 aa18.77■□□□□ 0.6
TARDBP-228ENST00000629725 ALKBH8Q96BT7 664 aaKnown RBP18.77■□□□□ 0.6
TARDBP-228ENST00000629725 RMND5BQ96G75 393 aaPredicted RBP18.77■□□□□ 0.6
TARDBP-228ENST00000629725 GPATCH1Q9BRR8 931 aaKnown RBP18.77■□□□□ 0.6
TARDBP-228ENST00000629725 TTYH2Q9BSA4 534 aa18.77■□□□□ 0.6
TARDBP-228ENST00000629725 TSGA10Q9BZW7 698 aa18.77■□□□□ 0.6
TARDBP-228ENST00000629725 TRIM5Q9C035 493 aa18.77■□□□□ 0.6
TARDBP-228ENST00000629725 ATG10Q9H0Y0 220 aa18.77■□□□□ 0.6
TARDBP-228ENST00000629725 CLEC4MQ9H2X3 399 aaPredicted RBP18.77■□□□□ 0.6
TARDBP-228ENST00000629725 FBXW2Q9UKT8 454 aa18.77■□□□□ 0.6
TARDBP-228ENST00000629725 RPH3AQ9Y2J0 694 aaPredicted RBP18.77■□□□□ 0.6
TARDBP-228ENST00000629725 FIGNL2A6NMB9 653 aa18.76■□□□□ 0.59
TARDBP-228ENST00000629725 ACOT7O00154 380 aa18.76■□□□□ 0.59
TARDBP-228ENST00000629725 OR1F1O43749 312 aa18.76■□□□□ 0.59
TARDBP-228ENST00000629725 CEP104O60308 925 aa18.76■□□□□ 0.59
TARDBP-228ENST00000629725 B3GALT4O96024 378 aa18.76■□□□□ 0.59
TARDBP-228ENST00000629725 SERPIND1P05546 499 aa18.76■□□□□ 0.59
TARDBP-228ENST00000629725 F7P08709 466 aaPredicted RBP18.76■□□□□ 0.59
TARDBP-228ENST00000629725 DLX5P56178 289 aa18.76■□□□□ 0.59
TARDBP-228ENST00000629725 PPIAP62937 165 aaKnown RBP18.76■□□□□ 0.59
TARDBP-228ENST00000629725 PLGLB1Q02325 96 aa18.76■□□□□ 0.59
TARDBP-228ENST00000629725 ZNF470Q6ECI4 717 aa18.76■□□□□ 0.59
TARDBP-228ENST00000629725 ZNF585AQ6P3V2 769 aa18.76■□□□□ 0.59
TARDBP-228ENST00000629725 AGTRAPQ6RW13 159 aa18.76■□□□□ 0.59
TARDBP-228ENST00000629725 ARSKQ6UWY0 536 aa18.76■□□□□ 0.59
TARDBP-228ENST00000629725 B3GNT6Q6ZMB0 384 aa18.76■□□□□ 0.59
TARDBP-228ENST00000629725 KIAA0408Q6ZU52 694 aa18.76■□□□□ 0.59
TARDBP-228ENST00000629725 ABHD13Q7L211 337 aa18.76■□□□□ 0.59
TARDBP-228ENST00000629725 SLC13A5Q86YT5 568 aaPredicted RBP18.76■□□□□ 0.59
TARDBP-228ENST00000629725 CPNE9Q8IYJ1 553 aa18.76■□□□□ 0.59
TARDBP-228ENST00000629725 B3GNT7Q8NFL0 401 aa18.76■□□□□ 0.59
TARDBP-228ENST00000629725 CD200R1Q8TD46 325 aa18.76■□□□□ 0.59
TARDBP-228ENST00000629725 CREB3L4Q8TEY5 395 aa18.76■□□□□ 0.59
TARDBP-228ENST00000629725 ALPK1Q96QP1 1244 aa18.76■□□□□ 0.59
TARDBP-228ENST00000629725 GPR21Q99679 349 aa18.76■□□□□ 0.59
TARDBP-228ENST00000629725 PRDM9Q9NQV7 894 aa18.76■□□□□ 0.59
TARDBP-228ENST00000629725 KCMF1Q9P0J7 381 aa18.76■□□□□ 0.59
TARDBP-228ENST00000629725 PLEKHA6Q9Y2H5 1048 aa18.76■□□□□ 0.59
TARDBP-228ENST00000629725 IGKV3D-11A0A0A0MRZ8 115 aa18.75■□□□□ 0.59
TARDBP-228ENST00000629725 OR14I1A6ND48 311 aa18.75■□□□□ 0.59
TARDBP-228ENST00000629725 ZNF888P0CJ79 500 aaPredicted RBP18.75■□□□□ 0.59
TARDBP-228ENST00000629725 SSR4P51571 173 aa18.75■□□□□ 0.59
TARDBP-228ENST00000629725 ADAM8P78325 824 aa18.75■□□□□ 0.59
TARDBP-228ENST00000629725 HYAL2Q12891 473 aa18.75■□□□□ 0.59
TARDBP-228ENST00000629725 NAE1Q13564 534 aa18.75■□□□□ 0.59
TARDBP-228ENST00000629725 ZNF549Q6P9A3 640 aa18.75■□□□□ 0.59
TARDBP-228ENST00000629725 LCTLQ6UWM7 567 aa18.75■□□□□ 0.59
TARDBP-228ENST00000629725 MBOAT1Q6ZNC8 495 aa18.75■□□□□ 0.59
TARDBP-228ENST00000629725 PSD4Q8NDX1 1056 aa18.75■□□□□ 0.59
TARDBP-228ENST00000629725 ARMC2Q8NEN0 867 aa18.75■□□□□ 0.59
TARDBP-228ENST00000629725 SARGQ9BW04 601 aa18.75■□□□□ 0.59
TARDBP-228ENST00000629725 ZDHHC11Q9H8X9 412 aa18.75■□□□□ 0.59
TARDBP-228ENST00000629725 NECTIN3Q9NQS3 549 aa18.75■□□□□ 0.59
TARDBP-228ENST00000629725 FBXO6Q9NRD1 293 aaPredicted RBP18.75■□□□□ 0.59
TARDBP-228ENST00000629725 DEPPQ9NTK1 212 aa18.75■□□□□ 0.59
TARDBP-228ENST00000629725 ERVK-11Q9UQG0 969 aa18.75■□□□□ 0.59
TARDBP-228ENST00000629725 PDE10AQ9Y233 779 aa18.75■□□□□ 0.59
TARDBP-228ENST00000629725 EML6Q6ZMW3 1958 aa18.74■□□□□ 0.59
TARDBP-228ENST00000629725 A0A0G2JNJ9 132 aa18.74■□□□□ 0.59
TARDBP-228ENST00000629725 FAM166BA8MTA8 275 aa18.74■□□□□ 0.59
TARDBP-228ENST00000629725 PSMD12O00232 456 aaPredicted RBP18.74■□□□□ 0.59
TARDBP-228ENST00000629725 EIF3FO00303 357 aaPredicted RBP18.74■□□□□ 0.59
TARDBP-228ENST00000629725 BCKDKO14874 412 aa18.74■□□□□ 0.59
TARDBP-228ENST00000629725 PROM1O43490 865 aa18.74■□□□□ 0.59
TARDBP-228ENST00000629725 MYO1DO94832 1006 aa18.74■□□□□ 0.59
TARDBP-228ENST00000629725 GLI4P10075 376 aa18.74■□□□□ 0.59
TARDBP-228ENST00000629725 NPPBP16860 134 aa18.74■□□□□ 0.59
TARDBP-228ENST00000629725 CCR8P51685 355 aa18.74■□□□□ 0.59
TARDBP-228ENST00000629725 CDK16Q00536 496 aa18.74■□□□□ 0.59
TARDBP-228ENST00000629725 RGS1Q08116 209 aa18.74■□□□□ 0.59
TARDBP-228ENST00000629725 KIF5AQ12840 1032 aa18.74■□□□□ 0.59
TARDBP-228ENST00000629725 CTBP1Q13363 440 aa18.74■□□□□ 0.59
TARDBP-228ENST00000629725 CASC4Q6P4E1 433 aa18.74■□□□□ 0.59
TARDBP-228ENST00000629725 RGS9BPQ6ZS82 235 aa18.74■□□□□ 0.59
TARDBP-228ENST00000629725 DENND6AQ8IWF6 608 aa18.74■□□□□ 0.59
TARDBP-228ENST00000629725 ABHD11Q8NFV4 315 aa18.74■□□□□ 0.59
TARDBP-228ENST00000629725 SMC6Q96SB8 1091 aa18.74■□□□□ 0.59
TARDBP-228ENST00000629725 SGPP1Q9BX95 441 aa18.74■□□□□ 0.59
TARDBP-228ENST00000629725 RASSF1Q9NS23 344 aa18.74■□□□□ 0.59
TARDBP-228ENST00000629725 Q9UFV3 132 aa18.74■□□□□ 0.59
TARDBP-228ENST00000629725 ADAMTS6Q9UKP5 1117 aa18.74■□□□□ 0.59
TARDBP-228ENST00000629725 YARS2Q9Y2Z4 477 aaKnown RBP18.74■□□□□ 0.59
TARDBP-228ENST00000629725 NSD1Q96L73 2696 aaPredicted RBP18.73■□□□□ 0.59
TARDBP-228ENST00000629725 PINLYPA6NC86 204 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms