RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 ADGRE2Q9UHX3 823 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 PPT2Q9UMR5 302 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 PRPF19Q9UMS4 504 aaKnown RBP9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 RUVBL1Q9Y265 456 aaKnown RBP9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 ASXL3Q9C0F0 2248 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 ANKDD1BA6NHY2 528 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 CFLARO15519 480 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 LCMT2O60294 686 aaKnown RBP9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 EEDO75530 441 aaKnown RBP9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 CIB2O75838 187 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 MYO1DO94832 1006 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 CCNDBP1O95273 360 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 B3GALT4O96024 378 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 CSF2P04141 144 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 NME1P15531 152 aaKnown RBP9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 XRCC1P18887 633 aaPredicted RBP9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 DGKQP52824 942 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 DAB2P98082 770 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 INSM1Q01101 510 aaPredicted RBP9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 RIPK1Q13546 671 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 GPR18Q14330 331 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 KPNB1Q14974 876 aaKnown RBP9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 RBBP5Q15291 538 aaKnown RBP9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 ELOCQ15369 112 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 TIGD2Q4W5G0 525 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 SPIN4Q56A73 249 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 BNC2Q6ZN30 1099 aaPredicted RBP9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 ADCK2Q7Z695 626 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 C1orf52Q8N6N3 182 aaKnown RBP9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 OR2L3Q8NG85 312 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 OR4E2Q8NGC2 313 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 OR4C6Q8NH72 309 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 SLC37A2Q8TED4 501 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 ZFPM2Q8WW38 1151 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 SLC22A18Q96BI1 424 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 CRELD1Q96HD1 420 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 EBPLQ9BY08 206 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 ZNF717Q9BY31 904 aaPredicted RBP9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 AICDAQ9GZX7 198 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 RHBGQ9H310 441 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 OR51B5Q9H339 312 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 SRMSQ9H3Y6 488 aa9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 MRPS30Q9NP92 439 aaKnown RBP9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 LEF1Q9UJU2 399 aaPredicted RBP9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 ARID1BQ8NFD5 2236 aaPredicted RBP9.08□□□□□ -0.96
PDLIM5-223ENST00000627587 ISM1B1AKI9 464 aa9.07□□□□□ -0.96
PDLIM5-223ENST00000627587 SIGLEC6O43699 453 aa9.07□□□□□ -0.96
PDLIM5-223ENST00000627587 BRINP1O60477 761 aa9.07□□□□□ -0.96
PDLIM5-223ENST00000627587 ATP6V1G2O95670 118 aa9.07□□□□□ -0.96
PDLIM5-223ENST00000627587 TGFB1P01137 390 aa9.07□□□□□ -0.96
PDLIM5-223ENST00000627587 GP1BAP07359 652 aa9.07□□□□□ -0.96
PDLIM5-223ENST00000627587 CHRM5P08912 532 aaPredicted RBP9.07□□□□□ -0.96
PDLIM5-223ENST00000627587 CMPK1P30085 196 aa9.07□□□□□ -0.96
PDLIM5-223ENST00000627587 SERPINB1P30740 379 aa9.07□□□□□ -0.96
PDLIM5-223ENST00000627587 GRK3P35626 688 aa9.07□□□□□ -0.96
PDLIM5-223ENST00000627587 CLDN8P56748 225 aa9.07□□□□□ -0.96
PDLIM5-223ENST00000627587 PSME3P61289 254 aa9.07□□□□□ -0.96
PDLIM5-223ENST00000627587 RHDQ02161 417 aa9.07□□□□□ -0.96
PDLIM5-223ENST00000627587 SPANXN4Q5MJ08 99 aa9.07□□□□□ -0.96
PDLIM5-223ENST00000627587 KIAA1614Q5VZ46 1190 aa9.07□□□□□ -0.96
PDLIM5-223ENST00000627587 ZNF425Q6IV72 752 aa9.07□□□□□ -0.96
PDLIM5-223ENST00000627587 GALNT18Q6P9A2 607 aa9.07□□□□□ -0.96
PDLIM5-223ENST00000627587 SLC2A7Q6PXP3 512 aa9.07□□□□□ -0.96
PDLIM5-223ENST00000627587 DLEU7Q6UYE1 221 aa9.07□□□□□ -0.96
PDLIM5-223ENST00000627587 PLD3Q8IV08 490 aa9.07□□□□□ -0.96
PDLIM5-223ENST00000627587 FBXW8Q8N3Y1 598 aa9.07□□□□□ -0.96
PDLIM5-223ENST00000627587 FAM46DQ8NEK8 389 aa9.07□□□□□ -0.96
PDLIM5-223ENST00000627587 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.07□□□□□ -0.96
PDLIM5-223ENST00000627587 TSSK3Q96PN8 268 aa9.07□□□□□ -0.96
PDLIM5-223ENST00000627587 DEPDC7Q96QD5 511 aa9.07□□□□□ -0.96
PDLIM5-223ENST00000627587 CDRT15Q96T59 188 aa9.07□□□□□ -0.96
PDLIM5-223ENST00000627587 DUSP23Q9BVJ7 150 aa9.07□□□□□ -0.96
PDLIM5-223ENST00000627587 TRIM8Q9BZR9 551 aa9.07□□□□□ -0.96
PDLIM5-223ENST00000627587 NT5DC2Q9H857 520 aa9.07□□□□□ -0.96
PDLIM5-223ENST00000627587 GID8Q9NWU2 228 aa9.07□□□□□ -0.96
PDLIM5-223ENST00000627587 SIRT5Q9NXA8 310 aa9.07□□□□□ -0.96
PDLIM5-223ENST00000627587 GMPR2Q9P2T1 348 aaKnown RBP9.07□□□□□ -0.96
PDLIM5-223ENST00000627587 CPNE7Q9UBL6 633 aa9.07□□□□□ -0.96
PDLIM5-223ENST00000627587 CROTQ9UKG9 612 aa9.07□□□□□ -0.96
PDLIM5-223ENST00000627587 EXO1Q9UQ84 846 aaKnown RBP9.07□□□□□ -0.96
PDLIM5-223ENST00000627587 ERVH48-1M5A8F1 160 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 SAP18O00422 153 aaKnown RBP9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 MAP3K7O43318 606 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 CKMT1AP12532 417 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 SLC6A2P23975 617 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 HRH2P25021 359 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 PTX3P26022 381 aaPredicted RBP9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 MSX2P35548 267 aaPredicted RBP9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 CLNS1AP54105 237 aaKnown RBP9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 PCBP4P57723 403 aaKnown RBP9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 TLE3Q04726 772 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 CAPRIN1Q14444 709 aaKnown RBP9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 FAM174BQ3ZCQ3 159 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 WASHC2DQ5SRD0 308 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 C1orf146Q5VVC0 180 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 CDCP2Q5VXM1 449 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 NET1Q7Z628 596 aaPredicted RBP9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 SLC9B2Q86UD5 537 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 GKN2Q86XP6 184 aa9.06□□□□□ -0.96
PDLIM5-223ENST00000627587 SLC25A45Q8N413 288 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms