RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 YPEL5P62699 121 aa21.08■□□□□ 0.96
PNKP-220ENST00000627232 VAC14Q08AM6 782 aa21.08■□□□□ 0.96
PNKP-220ENST00000627232 APOFQ13790 326 aa21.08■□□□□ 0.96
PNKP-220ENST00000627232 CCINQ13939 588 aa21.08■□□□□ 0.96
PNKP-220ENST00000627232 TEAD4Q15561 434 aa21.08■□□□□ 0.96
PNKP-220ENST00000627232 LARP7Q4G0J3 582 aaKnown RBP eCLIP21.08■□□□□ 0.96
PNKP-220ENST00000627232 LIN52Q52LA3 116 aa21.08■□□□□ 0.96
PNKP-220ENST00000627232 CBLL1Q75N03 491 aa21.08■□□□□ 0.96
PNKP-220ENST00000627232 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.08■□□□□ 0.96
PNKP-220ENST00000627232 FAM47BQ8NA70 645 aa21.08■□□□□ 0.96
PNKP-220ENST00000627232 OR52N2Q8NGI0 321 aa21.08■□□□□ 0.96
PNKP-220ENST00000627232 OR5K1Q8NHB7 308 aa21.08■□□□□ 0.96
PNKP-220ENST00000627232 PNPT1Q8TCS8 783 aaKnown RBP21.08■□□□□ 0.96
PNKP-220ENST00000627232 TM4SF18Q96CE8 201 aa21.08■□□□□ 0.96
PNKP-220ENST00000627232 SORBS1Q9BX66 1292 aaKnown RBP21.08■□□□□ 0.96
PNKP-220ENST00000627232 MIEF1Q9NQG6 463 aa21.08■□□□□ 0.96
PNKP-220ENST00000627232 TAS2R9Q9NYW1 312 aa21.08■□□□□ 0.96
PNKP-220ENST00000627232 USE1Q9NZ43 259 aa21.08■□□□□ 0.96
PNKP-220ENST00000627232 PCOLCE2Q9UKZ9 415 aa21.08■□□□□ 0.96
PNKP-220ENST00000627232 IGKV1-8A0A0C4DH67 115 aa21.07■□□□□ 0.96
PNKP-220ENST00000627232 C10orf142B7Z368 130 aa21.07■□□□□ 0.96
PNKP-220ENST00000627232 H3BNH8 94 aa21.07■□□□□ 0.96
PNKP-220ENST00000627232 H3BQ06 376 aaPredicted RBP21.07■□□□□ 0.96
PNKP-220ENST00000627232 TOR1BO14657 336 aa21.07■□□□□ 0.96
PNKP-220ENST00000627232 H6PDO95479 791 aa21.07■□□□□ 0.96
PNKP-220ENST00000627232 SEMG1P04279 462 aa21.07■□□□□ 0.96
PNKP-220ENST00000627232 DDCP20711 480 aa21.07■□□□□ 0.96
PNKP-220ENST00000627232 GRK3P35626 688 aa21.07■□□□□ 0.96
PNKP-220ENST00000627232 TRA2BP62995 288 aaKnown RBP21.07■□□□□ 0.96
PNKP-220ENST00000627232 FADDQ13158 208 aa21.07■□□□□ 0.96
PNKP-220ENST00000627232 LRRC23Q53EV4 343 aaPredicted RBP21.07■□□□□ 0.96
PNKP-220ENST00000627232 TMEM35AQ53FP2 167 aa21.07■□□□□ 0.96
PNKP-220ENST00000627232 CYBRD1Q53TN4 286 aa21.07■□□□□ 0.96
PNKP-220ENST00000627232 STK32CQ86UX6 486 aa21.07■□□□□ 0.96
PNKP-220ENST00000627232 CREB3L4Q8TEY5 395 aa21.07■□□□□ 0.96
PNKP-220ENST00000627232 FAM3CQ92520 227 aa21.07■□□□□ 0.96
PNKP-220ENST00000627232 CIDECQ96AQ7 238 aaPredicted RBP21.07■□□□□ 0.96
PNKP-220ENST00000627232 SLC35A5Q9BS91 424 aa21.07■□□□□ 0.96
PNKP-220ENST00000627232 SARGQ9BW04 601 aa21.07■□□□□ 0.96
PNKP-220ENST00000627232 CD93Q9NPY3 652 aa21.07■□□□□ 0.96
PNKP-220ENST00000627232 NDUFA13Q9P0J0 144 aa21.07■□□□□ 0.96
PNKP-220ENST00000627232 SCHIP1Q9P0W5 487 aaPredicted RBP21.07■□□□□ 0.96
PNKP-220ENST00000627232 TAAR2Q9P1P5 351 aa21.07■□□□□ 0.96
PNKP-220ENST00000627232 MYRFQ9Y2G1 1151 aa21.07■□□□□ 0.96
PNKP-220ENST00000627232 HS3ST3A1Q9Y663 406 aa21.07■□□□□ 0.96
PNKP-220ENST00000627232 PLXND1Q9Y4D7 1925 aa21.06■□□□□ 0.96
PNKP-220ENST00000627232 A0A1W2PRB8 838 aa21.06■□□□□ 0.96
PNKP-220ENST00000627232 SHISA7A6NL88 538 aa21.06■□□□□ 0.96
PNKP-220ENST00000627232 LCMT2O60294 686 aaKnown RBP21.06■□□□□ 0.96
PNKP-220ENST00000627232 CLPTM1O96005 669 aa21.06■□□□□ 0.96
PNKP-220ENST00000627232 ALPLP05186 524 aa21.06■□□□□ 0.96
PNKP-220ENST00000627232 AKT2P31751 481 aa21.06■□□□□ 0.96
PNKP-220ENST00000627232 SHMT2P34897 504 aa21.06■□□□□ 0.96
PNKP-220ENST00000627232 RPL5P46777 297 aaKnown RBP21.06■□□□□ 0.96
PNKP-220ENST00000627232 ARFIP1P53367 373 aa21.06■□□□□ 0.96
PNKP-220ENST00000627232 MVDP53602 400 aa21.06■□□□□ 0.96
PNKP-220ENST00000627232 ADARB1P78563 741 aaKnown RBP21.06■□□□□ 0.96
PNKP-220ENST00000627232 RBBP4Q09028 425 aa21.06■□□□□ 0.96
PNKP-220ENST00000627232 ZDHHC21Q8IVQ6 265 aa21.06■□□□□ 0.96
PNKP-220ENST00000627232 TBC1D19Q8N5T2 526 aa21.06■□□□□ 0.96
PNKP-220ENST00000627232 C11orf65Q8NCR3 313 aa21.06■□□□□ 0.96
PNKP-220ENST00000627232 CYGBQ8WWM9 190 aa21.06■□□□□ 0.96
PNKP-220ENST00000627232 PDXPQ96GD0 296 aa21.06■□□□□ 0.96
PNKP-220ENST00000627232 SLC6A16Q9GZN6 736 aa21.06■□□□□ 0.96
PNKP-220ENST00000627232 EPB41L1Q9H4G0 881 aa21.06■□□□□ 0.96
PNKP-220ENST00000627232 DDX31Q9H8H2 851 aaKnown RBP21.06■□□□□ 0.96
PNKP-220ENST00000627232 LHX9Q9NQ69 397 aa21.06■□□□□ 0.96
PNKP-220ENST00000627232 UTS2RQ9UKP6 389 aa21.06■□□□□ 0.96
PNKP-220ENST00000627232 ZNF682O95780 498 aa21.05■□□□□ 0.96
PNKP-220ENST00000627232 ALBP02768 609 aa21.05■□□□□ 0.96
PNKP-220ENST00000627232 PABPC4LP0CB38 370 aaKnown RBP21.05■□□□□ 0.96
PNKP-220ENST00000627232 CMPK1P30085 196 aa21.05■□□□□ 0.96
PNKP-220ENST00000627232 EPS8Q12929 822 aa21.05■□□□□ 0.96
PNKP-220ENST00000627232 HEPACAMQ14CZ8 416 aa21.05■□□□□ 0.96
PNKP-220ENST00000627232 ZIC1Q15915 447 aa21.05■□□□□ 0.96
PNKP-220ENST00000627232 PRSS53Q2L4Q9 553 aa21.05■□□□□ 0.96
PNKP-220ENST00000627232 DDX59Q5T1V6 619 aaKnown RBP eCLIP21.05■□□□□ 0.96
PNKP-220ENST00000627232 OTUD3Q5T2D3 398 aaPredicted RBP21.05■□□□□ 0.96
PNKP-220ENST00000627232 FOXB2Q5VYV0 432 aa21.05■□□□□ 0.96
PNKP-220ENST00000627232 USP51Q70EK9 711 aa21.05■□□□□ 0.96
PNKP-220ENST00000627232 ADCK2Q7Z695 626 aa21.05■□□□□ 0.96
PNKP-220ENST00000627232 ADGRF3Q8IZF5 1079 aa21.05■□□□□ 0.96
PNKP-220ENST00000627232 NAGSQ8N159 534 aa21.05■□□□□ 0.96
PNKP-220ENST00000627232 OR2L3Q8NG85 312 aa21.05■□□□□ 0.96
PNKP-220ENST00000627232 RMND5BQ96G75 393 aaPredicted RBP21.05■□□□□ 0.96
PNKP-220ENST00000627232 DPH2Q9BQC3 489 aaPredicted RBP21.05■□□□□ 0.96
PNKP-220ENST00000627232 OSBPL10Q9BXB5 764 aa21.05■□□□□ 0.96
PNKP-220ENST00000627232 SLC6A20Q9NP91 592 aa21.05■□□□□ 0.96
PNKP-220ENST00000627232 IL1RAPQ9NPH3 570 aa21.05■□□□□ 0.96
PNKP-220ENST00000627232 USP36Q9P275 1121 aaKnown RBP21.05■□□□□ 0.96
PNKP-220ENST00000627232 TBC1D29Q9UFV1 150 aa21.05■□□□□ 0.96
PNKP-220ENST00000627232 FAF1Q9UNN5 650 aaPredicted RBP21.05■□□□□ 0.96
PNKP-220ENST00000627232 LRP4O75096 1905 aa21.05■□□□□ 0.96
PNKP-220ENST00000627232 RTCAO00442 366 aaKnown RBP21.04■□□□□ 0.96
PNKP-220ENST00000627232 TNFRSF21O75509 655 aa21.04■□□□□ 0.96
PNKP-220ENST00000627232 KRT75O95678 551 aa21.04■□□□□ 0.96
PNKP-220ENST00000627232 SNAP29O95721 258 aa21.04■□□□□ 0.96
PNKP-220ENST00000627232 NTRK1P04629 796 aa21.04■□□□□ 0.96
PNKP-220ENST00000627232 THRBP10828 461 aa21.04■□□□□ 0.96
PNKP-220ENST00000627232 AHRP35869 848 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 165.8 ms