RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 ATG14Q6ZNE5 492 aa15.81■□□□□ 0.12
UBE3D-208ENST00000626828 PARP9Q8IXQ6 854 aa15.81■□□□□ 0.12
UBE3D-208ENST00000626828 LAS2Q8IYD9 372 aa15.81■□□□□ 0.12
UBE3D-208ENST00000626828 SRFBP1Q8NEF9 429 aaKnown RBP15.81■□□□□ 0.12
UBE3D-208ENST00000626828 PCSK5Q92824 1860 aa15.81■□□□□ 0.12
UBE3D-208ENST00000626828 GAL3ST3Q96A11 431 aa15.81■□□□□ 0.12
UBE3D-208ENST00000626828 TBC1D20Q96BZ9 403 aa15.81■□□□□ 0.12
UBE3D-208ENST00000626828 C8orf44Q96CB5 159 aa15.81■□□□□ 0.12
UBE3D-208ENST00000626828 MS4A6EQ96DS6 147 aa15.81■□□□□ 0.12
UBE3D-208ENST00000626828 PHF21BQ96EK2 531 aa15.81■□□□□ 0.12
UBE3D-208ENST00000626828 PEX11GQ96HA9 241 aa15.81■□□□□ 0.12
UBE3D-208ENST00000626828 NUDT9Q9BW91 350 aa15.81■□□□□ 0.12
UBE3D-208ENST00000626828 VN1R1Q9GZP7 353 aa15.81■□□□□ 0.12
UBE3D-208ENST00000626828 IPPKQ9H8X2 491 aa15.81■□□□□ 0.12
UBE3D-208ENST00000626828 TBK1Q9UHD2 729 aa15.81■□□□□ 0.12
UBE3D-208ENST00000626828 BOD1L1Q8NFC6 3051 aa15.81■□□□□ 0.12
UBE3D-208ENST00000626828 NSG1A0A0A6YYJ2 146 aa15.8■□□□□ 0.12
UBE3D-208ENST00000626828 A0A1W2PQ72 361 aa15.8■□□□□ 0.12
UBE3D-208ENST00000626828 ZNF860A6NHJ4 632 aa15.8■□□□□ 0.12
UBE3D-208ENST00000626828 MASP2O00187 686 aa15.8■□□□□ 0.12
UBE3D-208ENST00000626828 UGDHO60701 494 aa15.8■□□□□ 0.12
UBE3D-208ENST00000626828 DNAJB6O75190 326 aa15.8■□□□□ 0.12
UBE3D-208ENST00000626828 B3GALT4O96024 378 aa15.8■□□□□ 0.12
UBE3D-208ENST00000626828 PDGFAP04085 211 aa15.8■□□□□ 0.12
UBE3D-208ENST00000626828 ALPPP05187 535 aa15.8■□□□□ 0.12
UBE3D-208ENST00000626828 C8orf89P0DMQ9 161 aa15.8■□□□□ 0.12
UBE3D-208ENST00000626828 NR1D1P20393 614 aa15.8■□□□□ 0.12
UBE3D-208ENST00000626828 ITGA3P26006 1051 aa15.8■□□□□ 0.12
UBE3D-208ENST00000626828 SERPINB1P30740 379 aa15.8■□□□□ 0.12
UBE3D-208ENST00000626828 TGM3Q08188 693 aa15.8■□□□□ 0.12
UBE3D-208ENST00000626828 VWA5B1Q5TIE3 1220 aa15.8■□□□□ 0.12
UBE3D-208ENST00000626828 GRHL2Q6ISB3 625 aa15.8■□□□□ 0.12
UBE3D-208ENST00000626828 CHSY3Q70JA7 882 aa15.8■□□□□ 0.12
UBE3D-208ENST00000626828 VN1R5Q7Z5H4 357 aa15.8■□□□□ 0.12
UBE3D-208ENST00000626828 TDRPQ86YL5 185 aa15.8■□□□□ 0.12
UBE3D-208ENST00000626828 TMEM151AQ8N4L1 468 aa15.8■□□□□ 0.12
UBE3D-208ENST00000626828 PTGR2Q8N8N7 351 aaPredicted RBP15.8■□□□□ 0.12
UBE3D-208ENST00000626828 OR2L5Q8NG80 312 aa15.8■□□□□ 0.12
UBE3D-208ENST00000626828 OR7G3Q8NG95 312 aa15.8■□□□□ 0.12
UBE3D-208ENST00000626828 OR5T3Q8NGG3 340 aa15.8■□□□□ 0.12
UBE3D-208ENST00000626828 ATP6V1E2Q96A05 226 aa15.8■□□□□ 0.12
UBE3D-208ENST00000626828 NPLQ9BXD5 320 aaPredicted RBP15.8■□□□□ 0.12
UBE3D-208ENST00000626828 REXO4Q9GZR2 422 aaKnown RBP15.8■□□□□ 0.12
UBE3D-208ENST00000626828 AICDAQ9GZX7 198 aa15.8■□□□□ 0.12
UBE3D-208ENST00000626828 LHPPQ9H008 270 aa15.8■□□□□ 0.12
UBE3D-208ENST00000626828 ZNF552Q9H707 407 aaPredicted RBP15.8■□□□□ 0.12
UBE3D-208ENST00000626828 ACTR8Q9H981 624 aa15.8■□□□□ 0.12
UBE3D-208ENST00000626828 PRM3Q9NNZ6 103 aa15.8■□□□□ 0.12
UBE3D-208ENST00000626828 XPR1Q9UBH6 696 aa15.8■□□□□ 0.12
UBE3D-208ENST00000626828 C19orf25Q9UFG5 118 aaPredicted RBP15.8■□□□□ 0.12
UBE3D-208ENST00000626828 DCDC2Q9UHG0 476 aa15.8■□□□□ 0.12
UBE3D-208ENST00000626828 PCDHGA11Q9Y5H2 935 aa15.8■□□□□ 0.12
UBE3D-208ENST00000626828 NBASA2RRP1 2371 aa15.8■□□□□ 0.12
UBE3D-208ENST00000626828 NUP210LQ5VU65 1888 aa15.8■□□□□ 0.12
UBE3D-208ENST00000626828 LRRC14BA6NHZ5 514 aa15.79■□□□□ 0.12
UBE3D-208ENST00000626828 PSMD12O00232 456 aaPredicted RBP15.79■□□□□ 0.12
UBE3D-208ENST00000626828 E2F3O00716 465 aa15.79■□□□□ 0.12
UBE3D-208ENST00000626828 ERI3O43414 337 aaKnown RBP15.79■□□□□ 0.12
UBE3D-208ENST00000626828 DPM1O60762 260 aa15.79■□□□□ 0.12
UBE3D-208ENST00000626828 SIX3O95343 332 aaPredicted RBP15.79■□□□□ 0.12
UBE3D-208ENST00000626828 FHP07954 510 aa15.79■□□□□ 0.12
UBE3D-208ENST00000626828 GSTA1P08263 222 aa15.79■□□□□ 0.12
UBE3D-208ENST00000626828 RNH1P13489 461 aaKnown RBP15.79■□□□□ 0.12
UBE3D-208ENST00000626828 TAC1P20366 129 aa15.79■□□□□ 0.12
UBE3D-208ENST00000626828 JAK1P23458 1154 aa15.79■□□□□ 0.12
UBE3D-208ENST00000626828 EEF1DP29692 281 aaKnown RBP15.79■□□□□ 0.12
UBE3D-208ENST00000626828 HNRNPH1P31943 449 aaKnown RBP15.79■□□□□ 0.12
UBE3D-208ENST00000626828 VSNL1P62760 191 aa15.79■□□□□ 0.12
UBE3D-208ENST00000626828 AP2B1P63010 937 aa15.79■□□□□ 0.12
UBE3D-208ENST00000626828 RAPSNQ13702 412 aa15.79■□□□□ 0.12
UBE3D-208ENST00000626828 RASA2Q15283 850 aa15.79■□□□□ 0.12
UBE3D-208ENST00000626828 WDR93Q6P2C0 686 aa15.79■□□□□ 0.12
UBE3D-208ENST00000626828 TRIM40Q6P9F5 258 aa15.79■□□□□ 0.12
UBE3D-208ENST00000626828 GOLGA7Q7Z5G4 137 aa15.79■□□□□ 0.12
UBE3D-208ENST00000626828 CPEB2Q7Z5Q1 589 aaKnown RBP15.79■□□□□ 0.12
UBE3D-208ENST00000626828 KBTBD2Q8IY47 623 aa15.79■□□□□ 0.12
UBE3D-208ENST00000626828 ZNF473Q8WTR7 871 aaKnown RBP15.79■□□□□ 0.12
UBE3D-208ENST00000626828 REPS1Q96D71 796 aa15.79■□□□□ 0.12
UBE3D-208ENST00000626828 F2RL3Q96RI0 385 aa15.79■□□□□ 0.12
UBE3D-208ENST00000626828 ROGDIQ9GZN7 287 aa15.79■□□□□ 0.12
UBE3D-208ENST00000626828 ZNF700Q9H0M5 742 aa15.79■□□□□ 0.12
UBE3D-208ENST00000626828 ZNF160Q9HCG1 818 aa15.79■□□□□ 0.12
UBE3D-208ENST00000626828 RIC8BQ9NVN3 520 aa15.79■□□□□ 0.12
UBE3D-208ENST00000626828 TMEM216Q9P0N5 145 aa15.79■□□□□ 0.12
UBE3D-208ENST00000626828 TSC22D4Q9Y3Q8 395 aa15.79■□□□□ 0.12
UBE3D-208ENST00000626828 IGHV1-45A0A0A0MS14 117 aa15.78■□□□□ 0.12
UBE3D-208ENST00000626828 MAGEB17A8MXT2 336 aa15.78■□□□□ 0.12
UBE3D-208ENST00000626828 B3GALT2O43825 422 aa15.78■□□□□ 0.12
UBE3D-208ENST00000626828 SLC28A2O43868 658 aa15.78■□□□□ 0.12
UBE3D-208ENST00000626828 CLDN9O95484 217 aa15.78■□□□□ 0.12
UBE3D-208ENST00000626828 TBX6O95947 436 aaPredicted RBP15.78■□□□□ 0.12
UBE3D-208ENST00000626828 SHBGP04278 402 aa15.78■□□□□ 0.12
UBE3D-208ENST00000626828 PYGBP11216 843 aa15.78■□□□□ 0.12
UBE3D-208ENST00000626828 PCNAP12004 261 aa15.78■□□□□ 0.12
UBE3D-208ENST00000626828 COX6A1P12074 109 aa15.78■□□□□ 0.12
UBE3D-208ENST00000626828 HSD17B3P37058 310 aa15.78■□□□□ 0.12
UBE3D-208ENST00000626828 CASRP41180 1078 aa15.78■□□□□ 0.12
UBE3D-208ENST00000626828 PIK3CBP42338 1070 aa15.78■□□□□ 0.12
UBE3D-208ENST00000626828 PLA2G16P53816 162 aa15.78■□□□□ 0.12
UBE3D-208ENST00000626828 OLR1P78380 273 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms